RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
HPS3-202ENST00000460120 YEATS2Q9ULM3 1422 aa23.62■■□□□ 1.37
HPS3-202ENST00000460120 TRMT2AQ8IZ69 625 aaKnown RBP23.61■■□□□ 1.37
HPS3-202ENST00000460120 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 MS4A1P11836 297 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 QRICH2Q9H0J4 1663 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 EVC2Q86UK5 1308 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
HPS3-202ENST00000460120 TCP11L2Q8N4U5 519 aa23.61■■□□□ 1.37
HPS3-202ENST00000460120 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
HPS3-202ENST00000460120 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
HPS3-202ENST00000460120 CGNL1Q0VF96 1302 aa23.6■■□□□ 1.37
HPS3-202ENST00000460120 KDM2BQ8NHM5 1336 aa23.6■■□□□ 1.37
HPS3-202ENST00000460120 PANK1Q8TE04 598 aa23.6■■□□□ 1.37
HPS3-202ENST00000460120 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
HPS3-202ENST00000460120 PPLO60437 1756 aa23.59■■□□□ 1.37
HPS3-202ENST00000460120 CENPQQ7L2Z9 268 aaPredicted RBP23.59■■□□□ 1.37
HPS3-202ENST00000460120 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.36
HPS3-202ENST00000460120 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.36
HPS3-202ENST00000460120 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.36
HPS3-202ENST00000460120 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.36
HPS3-202ENST00000460120 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
HPS3-202ENST00000460120 COG6Q9Y2V7 657 aa23.57■■□□□ 1.36
HPS3-202ENST00000460120 CFAP74Q9C0B2 1584 aa23.57■■□□□ 1.36
HPS3-202ENST00000460120 SETBP1Q9Y6X0 1596 aa23.56■■□□□ 1.36
HPS3-202ENST00000460120 RUNDC1Q96C34 613 aa23.56■■□□□ 1.36
HPS3-202ENST00000460120 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
HPS3-202ENST00000460120 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
HPS3-202ENST00000460120 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
HPS3-202ENST00000460120 CFAP53Q96M91 514 aa23.54■■□□□ 1.36
HPS3-202ENST00000460120 U2SURPO15042 1029 aaKnown RBP23.54■■□□□ 1.36
HPS3-202ENST00000460120 TNNQ9UQP3 1299 aa23.54■■□□□ 1.36
HPS3-202ENST00000460120 POGKQ9P215 609 aa23.53■■□□□ 1.36
HPS3-202ENST00000460120 GLI2P10070 1586 aa23.53■■□□□ 1.36
HPS3-202ENST00000460120 DEKP35659 375 aaKnown RBP23.53■■□□□ 1.36
HPS3-202ENST00000460120 SLC4A3P48751 1232 aa23.53■■□□□ 1.36
HPS3-202ENST00000460120 MLECQ14165 292 aa23.53■■□□□ 1.36
HPS3-202ENST00000460120 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
HPS3-202ENST00000460120 DIP2CQ9Y2E4 1556 aa23.52■■□□□ 1.36
HPS3-202ENST00000460120 IGHDP01880 384 aa23.51■■□□□ 1.35
HPS3-202ENST00000460120 CLUAP1Q96AJ1 413 aa23.51■■□□□ 1.35
HPS3-202ENST00000460120 TULP4Q9NRJ4 1543 aa23.5■■□□□ 1.35
HPS3-202ENST00000460120 NEXMIFQ5QGS0 1516 aa23.49■■□□□ 1.35
HPS3-202ENST00000460120 NEO1Q92859 1461 aa23.49■■□□□ 1.35
HPS3-202ENST00000460120 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
HPS3-202ENST00000460120 FAM69CQ0P6D2 419 aa23.48■■□□□ 1.35
HPS3-202ENST00000460120 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
HPS3-202ENST00000460120 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
HPS3-202ENST00000460120 ZC3H13Q5T200 1668 aaKnown RBP23.47■■□□□ 1.35
HPS3-202ENST00000460120 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
HPS3-202ENST00000460120 FBLN1P23142 703 aa23.45■■□□□ 1.34
HPS3-202ENST00000460120 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
HPS3-202ENST00000460120 PPM1GO15355 546 aaPredicted RBP23.44■■□□□ 1.34
HPS3-202ENST00000460120 SHPRHQ149N8 1683 aa23.44■■□□□ 1.34
HPS3-202ENST00000460120 RARSP54136 660 aaKnown RBP23.44■■□□□ 1.34
HPS3-202ENST00000460120 RLBP1P12271 317 aa23.43■■□□□ 1.34
HPS3-202ENST00000460120 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
HPS3-202ENST00000460120 C8orf34Q49A92 452 aa23.43■■□□□ 1.34
HPS3-202ENST00000460120 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
HPS3-202ENST00000460120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
HPS3-202ENST00000460120 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
HPS3-202ENST00000460120 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
HPS3-202ENST00000460120 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
HPS3-202ENST00000460120 CABP1Q9NZU7 370 aa23.39■■□□□ 1.34
HPS3-202ENST00000460120 NEFMP07197 916 aa23.39■■□□□ 1.33
HPS3-202ENST00000460120 CDK19Q9BWU1 502 aa23.39■■□□□ 1.33
HPS3-202ENST00000460120 FYB1O15117 783 aa23.38■■□□□ 1.33
HPS3-202ENST00000460120 PDE3AQ14432 1141 aa23.38■■□□□ 1.33
HPS3-202ENST00000460120 MYO5BQ9ULV0 1848 aa23.37■■□□□ 1.33
HPS3-202ENST00000460120 TERF2IPQ9NYB0 399 aa23.37■■□□□ 1.33
HPS3-202ENST00000460120 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
HPS3-202ENST00000460120 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
HPS3-202ENST00000460120 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
HPS3-202ENST00000460120 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
HPS3-202ENST00000460120 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
HPS3-202ENST00000460120 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
HPS3-202ENST00000460120 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
HPS3-202ENST00000460120 MYH16Q9H6N6 1097 aa23.34■■□□□ 1.33
HPS3-202ENST00000460120 DDRGK1Q96HY6 314 aa23.33■■□□□ 1.33
HPS3-202ENST00000460120 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
HPS3-202ENST00000460120 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.33
HPS3-202ENST00000460120 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
HPS3-202ENST00000460120 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
HPS3-202ENST00000460120 EXOSC9Q06265 439 aaKnown RBP23.32■■□□□ 1.32
HPS3-202ENST00000460120 PTPRMP28827 1452 aa23.31■■□□□ 1.32
HPS3-202ENST00000460120 NSD2O96028 1365 aa23.31■■□□□ 1.32
HPS3-202ENST00000460120 TMPOP42166 694 aaKnown RBP23.31■■□□□ 1.32
HPS3-202ENST00000460120 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
HPS3-202ENST00000460120 FTSJ3Q8IY81 847 aaKnown RBP23.3■■□□□ 1.32
HPS3-202ENST00000460120 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
HPS3-202ENST00000460120 TSPOAP1O95153 1857 aa23.29■■□□□ 1.32
HPS3-202ENST00000460120 PREX1Q8TCU6 1659 aa23.29■■□□□ 1.32
HPS3-202ENST00000460120 RIPK4P57078 832 aa23.29■■□□□ 1.32
HPS3-202ENST00000460120 TMEM131LA2VDJ0 1609 aa23.29■■□□□ 1.32
HPS3-202ENST00000460120 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
HPS3-202ENST00000460120 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
HPS3-202ENST00000460120 SEC24BO95487 1268 aa23.27■■□□□ 1.32
HPS3-202ENST00000460120 CCDC27Q2M243 656 aa23.27■■□□□ 1.32
HPS3-202ENST00000460120 PLEKHF1Q96S99 279 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms