RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 POGKQ9P215 609 aa15.49■□□□□ 0.07
CCDC12-204ENST00000460035 TOM1O60784 492 aa15.48■□□□□ 0.07
CCDC12-204ENST00000460035 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
CCDC12-204ENST00000460035 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
CCDC12-204ENST00000460035 SAFB2Q14151 953 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC12-204ENST00000460035 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
CCDC12-204ENST00000460035 PLEKHH1Q9ULM0 1364 aa15.47■□□□□ 0.07
CCDC12-204ENST00000460035 PRAM1Q96QH2 718 aa15.46■□□□□ 0.07
CCDC12-204ENST00000460035 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
CCDC12-204ENST00000460035 ATF3P18847 181 aa15.45■□□□□ 0.06
CCDC12-204ENST00000460035 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
CCDC12-204ENST00000460035 FBXO41Q8TF61 875 aa15.45■□□□□ 0.06
CCDC12-204ENST00000460035 ROBO1Q9Y6N7 1651 aa15.44■□□□□ 0.06
CCDC12-204ENST00000460035 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
CCDC12-204ENST00000460035 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
CCDC12-204ENST00000460035 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
CCDC12-204ENST00000460035 MST1RQ04912 1400 aa15.42■□□□□ 0.06
CCDC12-204ENST00000460035 EIF3AQ14152 1382 aaKnown RBP15.41■□□□□ 0.06
CCDC12-204ENST00000460035 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
CCDC12-204ENST00000460035 USP32Q8NFA0 1604 aa15.4■□□□□ 0.06
CCDC12-204ENST00000460035 MINK1Q8N4C8 1332 aaPredicted RBP15.4■□□□□ 0.06
CCDC12-204ENST00000460035 CENPJQ9HC77 1338 aaPredicted RBP15.39■□□□□ 0.05
CCDC12-204ENST00000460035 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CCDC12-204ENST00000460035 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
CCDC12-204ENST00000460035 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
CCDC12-204ENST00000460035 NUTM2FA1L443 756 aa15.37■□□□□ 0.05
CCDC12-204ENST00000460035 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
CCDC12-204ENST00000460035 C1orf167Q5SNV9 1468 aa15.37■□□□□ 0.05
CCDC12-204ENST00000460035 TOPAZ1Q8N9V7 1692 aa15.37■□□□□ 0.05
CCDC12-204ENST00000460035 TULP4Q9NRJ4 1543 aa15.37■□□□□ 0.05
CCDC12-204ENST00000460035 SBNO2Q9Y2G9 1366 aa15.36■□□□□ 0.05
CCDC12-204ENST00000460035 PHLPP1O60346 1717 aa15.36■□□□□ 0.05
CCDC12-204ENST00000460035 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
CCDC12-204ENST00000460035 ANKARQ7Z5J8 1434 aa15.35■□□□□ 0.05
CCDC12-204ENST00000460035 USP47Q96K76 1375 aa15.33■□□□□ 0.04
CCDC12-204ENST00000460035 WASLO00401 505 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-204ENST00000460035 ATP7BP35670 1465 aa15.32■□□□□ 0.04
CCDC12-204ENST00000460035 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
CCDC12-204ENST00000460035 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
CCDC12-204ENST00000460035 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
CCDC12-204ENST00000460035 CDK19Q9BWU1 502 aa15.31■□□□□ 0.04
CCDC12-204ENST00000460035 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
CCDC12-204ENST00000460035 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
CCDC12-204ENST00000460035 EVC2Q86UK5 1308 aa15.28■□□□□ 0.04
CCDC12-204ENST00000460035 PRR36Q9H6K5 1346 aa15.28■□□□□ 0.04
CCDC12-204ENST00000460035 HSPA1LP34931 641 aa15.28■□□□□ 0.04
CCDC12-204ENST00000460035 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
CCDC12-204ENST00000460035 AKAP12Q02952 1782 aa15.28■□□□□ 0.04
CCDC12-204ENST00000460035 TESK2Q96S53 571 aa15.27■□□□□ 0.04
CCDC12-204ENST00000460035 CABP2Q9NPB3 220 aa15.27■□□□□ 0.04
CCDC12-204ENST00000460035 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
CCDC12-204ENST00000460035 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
CCDC12-204ENST00000460035 NUDT16Q96DE0 195 aaKnown RBP15.26■□□□□ 0.03
CCDC12-204ENST00000460035 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
CCDC12-204ENST00000460035 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
CCDC12-204ENST00000460035 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.031e-7■□□□□ 8.4
CCDC12-204ENST00000460035 PMFBP1Q8TBY8 1022 aa15.24■□□□□ 0.03
CCDC12-204ENST00000460035 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
CCDC12-204ENST00000460035 PXDNQ92626 1479 aa15.24■□□□□ 0.03
CCDC12-204ENST00000460035 FOXO3O43524 673 aa15.23■□□□□ 0.03
CCDC12-204ENST00000460035 MON2Q7Z3U7 1717 aa15.23■□□□□ 0.03
CCDC12-204ENST00000460035 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
CCDC12-204ENST00000460035 HSPA5P11021 654 aaKnown RBP15.22■□□□□ 0.03
CCDC12-204ENST00000460035 PUS7Q96PZ0 661 aaKnown RBP15.22■□□□□ 0.03
CCDC12-204ENST00000460035 CCDC61Q9Y6R9 512 aa15.22■□□□□ 0.03
CCDC12-204ENST00000460035 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
CCDC12-204ENST00000460035 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
CCDC12-204ENST00000460035 SOS2Q07890 1332 aaPredicted RBP15.21■□□□□ 0.03
CCDC12-204ENST00000460035 PPIP5K1Q6PFW1 1433 aa15.21■□□□□ 0.03
CCDC12-204ENST00000460035 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.03
CCDC12-204ENST00000460035 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
CCDC12-204ENST00000460035 MYOM1P52179 1685 aa15.21■□□□□ 0.03
CCDC12-204ENST00000460035 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.02
CCDC12-204ENST00000460035 PLEKHG3A1L390 1219 aa15.2■□□□□ 0.02
CCDC12-204ENST00000460035 PSME1Q06323 249 aa15.2■□□□□ 0.02
CCDC12-204ENST00000460035 POLR3AO14802 1390 aaPredicted RBP15.2■□□□□ 0.02
CCDC12-204ENST00000460035 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
CCDC12-204ENST00000460035 TMF1P82094 1093 aa15.19■□□□□ 0.02
CCDC12-204ENST00000460035 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
CCDC12-204ENST00000460035 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
CCDC12-204ENST00000460035 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
CCDC12-204ENST00000460035 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
CCDC12-204ENST00000460035 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
CCDC12-204ENST00000460035 TMC1Q8TDI8 760 aa15.17■□□□□ 0.02
CCDC12-204ENST00000460035 LRRC59Q96AG4 307 aaKnown RBP15.17■□□□□ 0.02
CCDC12-204ENST00000460035 MARF1Q9Y4F3 1742 aaKnown RBP15.17■□□□□ 0.02
CCDC12-204ENST00000460035 CRYBG1Q9Y4K1 1723 aa15.17■□□□□ 0.02
CCDC12-204ENST00000460035 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
CCDC12-204ENST00000460035 JCADQ9P266 1359 aa15.16■□□□□ 0.02
CCDC12-204ENST00000460035 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
CCDC12-204ENST00000460035 POLR3GLQ9BT43 218 aa15.16■□□□□ 0.02
CCDC12-204ENST00000460035 CDCA8Q53HL2 280 aa15.15■□□□□ 0.02
CCDC12-204ENST00000460035 ACEP12821 1306 aa15.15■□□□□ 0.02
CCDC12-204ENST00000460035 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
CCDC12-204ENST00000460035 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
CCDC12-204ENST00000460035 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
CCDC12-204ENST00000460035 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
CCDC12-204ENST00000460035 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
CCDC12-204ENST00000460035 PNPLA6Q8IY17 1366 aa15.13■□□□□ 0.01
CCDC12-204ENST00000460035 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms