RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 WDR43Q15061 677 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 DUSP27Q5VZP5 1158 aa8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 CENPQQ7L2Z9 268 aaPredicted RBP8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 SIGLEC1Q9BZZ2 1709 aa8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
UBQLN4-202ENST00000459954 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 CEBPAP49715 358 aaPredicted RBP8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 GOLGA2Q08379 1002 aa8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 AAMPQ13685 434 aa8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 CDCA7LQ96GN5 454 aa8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 RIMS1Q86UR5 1692 aaKnown RBP8.02□□□□□ -1.13
UBQLN4-202ENST00000459954 A2ML1A8K2U0 1454 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 ERVK-7P63135 1459 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 ANKLE2Q86XL3 938 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 EID1Q9Y6B2 187 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 ADGRB3O60242 1522 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 NOS1P29475 1434 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 SHPRHQ149N8 1683 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 QRICH2Q9H0J4 1663 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 SPATA31D1Q6ZQQ2 1576 aa8.01□□□□□ -1.13
UBQLN4-202ENST00000459954 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
UBQLN4-202ENST00000459954 POLR3AO14802 1390 aaPredicted RBP8□□□□□ -1.13
UBQLN4-202ENST00000459954 PLEKHH1Q9ULM0 1364 aa8□□□□□ -1.13
UBQLN4-202ENST00000459954 C3P01024 1663 aa8□□□□□ -1.13
UBQLN4-202ENST00000459954 CRBNQ96SW2 442 aa8□□□□□ -1.13
UBQLN4-202ENST00000459954 STAG3Q9UJ98 1225 aa8□□□□□ -1.13
UBQLN4-202ENST00000459954 CLTCQ00610 1675 aaKnown RBP7.99□□□□□ -1.13
UBQLN4-202ENST00000459954 FBXO31Q5XUX0 539 aaPredicted RBP7.99□□□□□ -1.13
UBQLN4-202ENST00000459954 ANKRD26Q9UPS8 1709 aa7.99□□□□□ -1.13
UBQLN4-202ENST00000459954 LMTK3Q96Q04 1460 aa7.99□□□□□ -1.13
UBQLN4-202ENST00000459954 RPGRIP1LQ68CZ1 1315 aa7.99□□□□□ -1.13
UBQLN4-202ENST00000459954 PREX1Q8TCU6 1659 aa7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 CFAP65Q6ZU64 1925 aaKnown RBP7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 E9PSI1 815 aa7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 IDI1Q13907 227 aa7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 CAMSAP1Q5T5Y3 1602 aa7.98□□□□□ -1.13
UBQLN4-202ENST00000459954 PIK3C2BO00750 1634 aa7.97□□□□□ -1.13
UBQLN4-202ENST00000459954 CGNL1Q0VF96 1302 aa7.97□□□□□ -1.13
UBQLN4-202ENST00000459954 UGGT1Q9NYU2 1555 aa7.97□□□□□ -1.13
UBQLN4-202ENST00000459954 ARHGEF28Q8N1W1 1705 aaKnown RBP7.96□□□□□ -1.14
UBQLN4-202ENST00000459954 VGFO15240 615 aaPredicted RBP7.96□□□□□ -1.14
UBQLN4-202ENST00000459954 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
UBQLN4-202ENST00000459954 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.14
UBQLN4-202ENST00000459954 CEP170BQ9Y4F5 1589 aaPredicted RBP7.96□□□□□ -1.14
UBQLN4-202ENST00000459954 PLIN1O60240 522 aa7.95□□□□□ -1.14
UBQLN4-202ENST00000459954 ADGRB1O14514 1584 aa7.95□□□□□ -1.14
UBQLN4-202ENST00000459954 ZNF142P52746 1687 aaPredicted RBP7.95□□□□□ -1.14
UBQLN4-202ENST00000459954 NSD2O96028 1365 aa7.95□□□□□ -1.14
UBQLN4-202ENST00000459954 TMEM2Q9UHN6 1383 aa7.95□□□□□ -1.14
UBQLN4-202ENST00000459954 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
UBQLN4-202ENST00000459954 MED14O60244 1454 aa7.94□□□□□ -1.14
UBQLN4-202ENST00000459954 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
UBQLN4-202ENST00000459954 SLIT1O75093 1534 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 ADGRB2O60241 1585 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 NBR1Q14596 966 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 TXNDC2Q86VQ3 553 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 POTEDQ86YR6 584 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 WDR63Q8IWG1 891 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 C14orf93Q9H972 538 aaKnown RBP7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 CENPJQ9HC77 1338 aaPredicted RBP7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 MAPK8IP3Q9UPT6 1336 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 ZFYVE9O95405 1425 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 ARHGAP23Q9P227 1491 aa7.93□□□□□ -1.14
UBQLN4-202ENST00000459954 CT47B1P0C2W7 299 aaPredicted RBP7.92□□□□□ -1.14
UBQLN4-202ENST00000459954 C8orf34Q49A92 452 aa7.92□□□□□ -1.14
UBQLN4-202ENST00000459954 C20orf194Q5TEA3 1177 aa7.92□□□□□ -1.14
UBQLN4-202ENST00000459954 CARD14Q9BXL6 1004 aa7.92□□□□□ -1.14
UBQLN4-202ENST00000459954 ADGRF5Q8IZF2 1346 aa7.92□□□□□ -1.14
UBQLN4-202ENST00000459954 APAF1O14727 1248 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 HSPA2P54652 639 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 RUNDC1Q96C34 613 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 TBX22Q9Y458 520 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 PIK3R4Q99570 1358 aa7.91□□□□□ -1.14
UBQLN4-202ENST00000459954 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
UBQLN4-202ENST00000459954 NEFMP07197 916 aa7.9□□□□□ -1.14
UBQLN4-202ENST00000459954 NPM2Q86SE8 214 aaKnown RBP7.9□□□□□ -1.14
UBQLN4-202ENST00000459954 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
UBQLN4-202ENST00000459954 KIF20BQ96Q89 1820 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 MYO5BQ9ULV0 1848 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 NEXMIFQ5QGS0 1516 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 NSD3Q9BZ95 1437 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 PLEKHG1Q9ULL1 1385 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 PMFBP1Q8TBY8 1022 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 CFAP53Q96M91 514 aa7.89□□□□□ -1.15
UBQLN4-202ENST00000459954 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
UBQLN4-202ENST00000459954 ANKRD36BQ8N2N9 1353 aa7.88□□□□□ -1.15
UBQLN4-202ENST00000459954 LTKP29376 864 aa7.88□□□□□ -1.15
UBQLN4-202ENST00000459954 MORC1Q86VD1 984 aa7.88□□□□□ -1.15
UBQLN4-202ENST00000459954 CLUAP1Q96AJ1 413 aa7.88□□□□□ -1.15
UBQLN4-202ENST00000459954 RIMS2Q9UQ26 1411 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms