RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
UFD1-205ENST00000459854 PTPRTO14522 1441 aa12.25□□□□□ -0.45
UFD1-205ENST00000459854 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
UFD1-205ENST00000459854 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
UFD1-205ENST00000459854 TRPM2O94759 1503 aa12.24□□□□□ -0.45
UFD1-205ENST00000459854 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
UFD1-205ENST00000459854 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
UFD1-205ENST00000459854 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
UFD1-205ENST00000459854 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
UFD1-205ENST00000459854 ADGRF5Q8IZF2 1346 aa12.23□□□□□ -0.45
UFD1-205ENST00000459854 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
UFD1-205ENST00000459854 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
UFD1-205ENST00000459854 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
UFD1-205ENST00000459854 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
UFD1-205ENST00000459854 RIMS1Q86UR5 1692 aaKnown RBP12.23□□□□□ -0.45
UFD1-205ENST00000459854 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
UFD1-205ENST00000459854 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
UFD1-205ENST00000459854 TBX22Q9Y458 520 aa12.22□□□□□ -0.45
UFD1-205ENST00000459854 TPM4P67936 248 aa12.22□□□□□ -0.45
UFD1-205ENST00000459854 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
UFD1-205ENST00000459854 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
UFD1-205ENST00000459854 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
UFD1-205ENST00000459854 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
UFD1-205ENST00000459854 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.45
UFD1-205ENST00000459854 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.45
UFD1-205ENST00000459854 CEP152O94986 1710 aa12.21□□□□□ -0.45
UFD1-205ENST00000459854 USP47Q96K76 1375 aa12.21□□□□□ -0.46
UFD1-205ENST00000459854 MINK1Q8N4C8 1332 aaPredicted RBP12.21□□□□□ -0.46
UFD1-205ENST00000459854 MADDQ8WXG6 1647 aa12.21□□□□□ -0.46
UFD1-205ENST00000459854 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
UFD1-205ENST00000459854 AMOTL2Q9Y2J4 779 aa12.2□□□□□ -0.46
UFD1-205ENST00000459854 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
UFD1-205ENST00000459854 CALRP27797 417 aaKnown RBP12.2□□□□□ -0.46
UFD1-205ENST00000459854 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
UFD1-205ENST00000459854 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
UFD1-205ENST00000459854 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
UFD1-205ENST00000459854 ST20-MTHFSA0A0A6YYL1 179 aa12.19□□□□□ -0.46
UFD1-205ENST00000459854 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
UFD1-205ENST00000459854 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
UFD1-205ENST00000459854 PKNOX2Q96KN3 472 aa12.19□□□□□ -0.46
UFD1-205ENST00000459854 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
UFD1-205ENST00000459854 TERF2IPQ9NYB0 399 aa12.18□□□□□ -0.46
UFD1-205ENST00000459854 GPS2Q13227 327 aa12.18□□□□□ -0.46
UFD1-205ENST00000459854 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
UFD1-205ENST00000459854 DEPDC5O75140 1603 aa12.18□□□□□ -0.46
UFD1-205ENST00000459854 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
UFD1-205ENST00000459854 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
UFD1-205ENST00000459854 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
UFD1-205ENST00000459854 NBPF8Q3BBV2 869 aa12.17□□□□□ -0.46
UFD1-205ENST00000459854 RCAN3Q9UKA8 241 aa12.17□□□□□ -0.46
UFD1-205ENST00000459854 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
UFD1-205ENST00000459854 PLEKHG1Q9ULL1 1385 aa12.16□□□□□ -0.46
UFD1-205ENST00000459854 VWDEQ8N2E2 1590 aa12.16□□□□□ -0.46
UFD1-205ENST00000459854 TPM2P07951 284 aa12.16□□□□□ -0.46
UFD1-205ENST00000459854 LTKP29376 864 aa12.16□□□□□ -0.46
UFD1-205ENST00000459854 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
UFD1-205ENST00000459854 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
UFD1-205ENST00000459854 RALBP1Q15311 655 aa12.15□□□□□ -0.46
UFD1-205ENST00000459854 KCNA6P17658 529 aa12.15□□□□□ -0.47
UFD1-205ENST00000459854 TEX35Q5T0J7 233 aa12.15□□□□□ -0.47
UFD1-205ENST00000459854 ADGRB3O60242 1522 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 SPHKAPQ2M3C7 1700 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 E9PCH4 1651 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 SPATA31D1Q6ZQQ2 1576 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 SETD1BQ9UPS6 1966 aaKnown RBP12.14□□□□□ -0.47
UFD1-205ENST00000459854 KIF1BO60333 1816 aa12.14□□□□□ -0.47
UFD1-205ENST00000459854 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
UFD1-205ENST00000459854 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
UFD1-205ENST00000459854 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
UFD1-205ENST00000459854 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
UFD1-205ENST00000459854 CCDC34Q96HJ3 373 aa12.13□□□□□ -0.47
UFD1-205ENST00000459854 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
UFD1-205ENST00000459854 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
UFD1-205ENST00000459854 FGD1P98174 961 aa12.12□□□□□ -0.47
UFD1-205ENST00000459854 MSH6P52701 1360 aa12.12□□□□□ -0.47
UFD1-205ENST00000459854 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
UFD1-205ENST00000459854 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
UFD1-205ENST00000459854 MROH1Q8NDA8 1641 aa12.12□□□□□ -0.47
UFD1-205ENST00000459854 MROH2AA6NES4 1674 aa12.11□□□□□ -0.47
UFD1-205ENST00000459854 PREX1Q8TCU6 1659 aa12.11□□□□□ -0.47
UFD1-205ENST00000459854 KCNJ4P48050 445 aa12.11□□□□□ -0.47
UFD1-205ENST00000459854 SLKQ9H2G2 1235 aaPredicted RBP12.11□□□□□ -0.47
UFD1-205ENST00000459854 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
UFD1-205ENST00000459854 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 PSME1Q06323 249 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 KTN1Q86UP2 1357 aaKnown RBP12.1□□□□□ -0.47
UFD1-205ENST00000459854 CCDC66A2RUB6 948 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
UFD1-205ENST00000459854 PIK3R4Q99570 1358 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 CLTCL1P53675 1640 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 MYOM2P54296 1465 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
UFD1-205ENST00000459854 TOM1O60784 492 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
UFD1-205ENST00000459854 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms