RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
MRPL55-223ENST00000459783 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
MRPL55-223ENST00000459783 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
MRPL55-223ENST00000459783 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
MRPL55-223ENST00000459783 ARHGEF28Q8N1W1 1705 aaKnown RBP14.76□□□□□ -0.05
MRPL55-223ENST00000459783 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
MRPL55-223ENST00000459783 SLAIN2Q9P270 581 aa14.76□□□□□ -0.05
MRPL55-223ENST00000459783 CDC42BPGQ6DT37 1551 aa14.76□□□□□ -0.05
MRPL55-223ENST00000459783 GPRASP1Q5JY77 1395 aa14.75□□□□□ -0.05
MRPL55-223ENST00000459783 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
MRPL55-223ENST00000459783 RALGAPBQ86X10 1494 aa14.75□□□□□ -0.05
MRPL55-223ENST00000459783 ROBO1Q9Y6N7 1651 aa14.74□□□□□ -0.05
MRPL55-223ENST00000459783 ATF3P18847 181 aa14.74□□□□□ -0.05
MRPL55-223ENST00000459783 HSPA1LP34931 641 aa14.74□□□□□ -0.05
MRPL55-223ENST00000459783 C1orf167Q5SNV9 1468 aa14.73□□□□□ -0.05
MRPL55-223ENST00000459783 BRINP3Q76B58 766 aa14.72□□□□□ -0.05
MRPL55-223ENST00000459783 ADGRB2O60241 1585 aa14.72□□□□□ -0.05
MRPL55-223ENST00000459783 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
MRPL55-223ENST00000459783 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-223ENST00000459783 POGKQ9P215 609 aa14.71□□□□□ -0.05
MRPL55-223ENST00000459783 MINK1Q8N4C8 1332 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-223ENST00000459783 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
MRPL55-223ENST00000459783 ORAI2Q96SN7 254 aa14.69□□□□□ -0.06
MRPL55-223ENST00000459783 USP32Q8NFA0 1604 aa14.68□□□□□ -0.06
MRPL55-223ENST00000459783 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
MRPL55-223ENST00000459783 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
MRPL55-223ENST00000459783 PRR36Q9H6K5 1346 aa14.67□□□□□ -0.06
MRPL55-223ENST00000459783 DDX17Q92841 729 aaKnown RBP14.67□□□□□ -0.06
MRPL55-223ENST00000459783 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-223ENST00000459783 CARD11Q9BXL7 1154 aa14.66□□□□□ -0.06
MRPL55-223ENST00000459783 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-223ENST00000459783 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-223ENST00000459783 TULP4Q9NRJ4 1543 aa14.65□□□□□ -0.06
MRPL55-223ENST00000459783 NHSL1Q5SYE7 1610 aa14.64□□□□□ -0.07
MRPL55-223ENST00000459783 WASLO00401 505 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-223ENST00000459783 QRICH2Q9H0J4 1663 aa14.64□□□□□ -0.07
MRPL55-223ENST00000459783 ANKARQ7Z5J8 1434 aa14.63□□□□□ -0.07
MRPL55-223ENST00000459783 ATP7BP35670 1465 aa14.63□□□□□ -0.07
MRPL55-223ENST00000459783 ESCO1Q5FWF5 840 aa14.62□□□□□ -0.07
MRPL55-223ENST00000459783 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
MRPL55-223ENST00000459783 RGPD8O14715 1765 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-223ENST00000459783 CDK19Q9BWU1 502 aa14.61□□□□□ -0.07
MRPL55-223ENST00000459783 PXDNQ92626 1479 aa14.6□□□□□ -0.07
MRPL55-223ENST00000459783 EIF3AQ14152 1382 aaKnown RBP14.59□□□□□ -0.07
MRPL55-223ENST00000459783 FOXO3O43524 673 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.08
MRPL55-223ENST00000459783 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
MRPL55-223ENST00000459783 TESK2Q96S53 571 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 CABP2Q9NPB3 220 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 SOS2Q07890 1332 aaPredicted RBP14.58□□□□□ -0.08
MRPL55-223ENST00000459783 USP47Q96K76 1375 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 SBNO2Q9Y2G9 1366 aa14.58□□□□□ -0.08
MRPL55-223ENST00000459783 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
MRPL55-223ENST00000459783 KIF1AQ12756 1690 aa14.56□□□□□ -0.08
MRPL55-223ENST00000459783 ST20-MTHFSA0A0A6YYL1 179 aa14.56□□□□□ -0.08
MRPL55-223ENST00000459783 PMFBP1Q8TBY8 1022 aa14.56□□□□□ -0.08
MRPL55-223ENST00000459783 NPHP3Q7Z494 1330 aa14.54□□□□□ -0.08
MRPL55-223ENST00000459783 JCADQ9P266 1359 aa14.54□□□□□ -0.08
MRPL55-223ENST00000459783 PNPLA6Q8IY17 1366 aa14.53□□□□□ -0.08
MRPL55-223ENST00000459783 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
MRPL55-223ENST00000459783 LRP6O75581 1613 aa14.52□□□□□ -0.08
MRPL55-223ENST00000459783 MED1Q15648 1581 aaPredicted RBP14.52□□□□□ -0.08
MRPL55-223ENST00000459783 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
MRPL55-223ENST00000459783 SHPRHQ149N8 1683 aa14.52□□□□□ -0.09
MRPL55-223ENST00000459783 PPIP5K1Q6PFW1 1433 aa14.51□□□□□ -0.09
MRPL55-223ENST00000459783 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-223ENST00000459783 PLEKHG3A1L390 1219 aa14.51□□□□□ -0.09
MRPL55-223ENST00000459783 KRT28Q7Z3Y7 464 aa14.51□□□□□ -0.09
MRPL55-223ENST00000459783 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
MRPL55-223ENST00000459783 TRPM3Q9HCF6 1732 aaPredicted RBP14.5□□□□□ -0.09
MRPL55-223ENST00000459783 ACEP12821 1306 aa14.5□□□□□ -0.09
MRPL55-223ENST00000459783 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
MRPL55-223ENST00000459783 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
MRPL55-223ENST00000459783 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
MRPL55-223ENST00000459783 CABP1Q9NZU7 370 aa14.49□□□□□ -0.09
MRPL55-223ENST00000459783 HSPA5P11021 654 aaKnown RBP14.48□□□□□ -0.09
MRPL55-223ENST00000459783 TNS3Q68CZ2 1445 aa14.48□□□□□ -0.09
MRPL55-223ENST00000459783 SBNO1A3KN83 1393 aa14.47□□□□□ -0.09
MRPL55-223ENST00000459783 CD163L1Q9NR16 1453 aa14.47□□□□□ -0.09
MRPL55-223ENST00000459783 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
MRPL55-223ENST00000459783 COL22A1Q8NFW1 1626 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-223ENST00000459783 PSME1Q06323 249 aa14.46□□□□□ -0.09
MRPL55-223ENST00000459783 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
MRPL55-223ENST00000459783 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
MRPL55-223ENST00000459783 SPATA31A6Q5VVP1 1343 aa14.45□□□□□ -0.1
MRPL55-223ENST00000459783 SSH2Q76I76 1423 aa14.45□□□□□ -0.1
MRPL55-223ENST00000459783 CPSF1Q10570 1443 aaKnown RBP14.44□□□□□ -0.1
MRPL55-223ENST00000459783 USP6P35125 1406 aa14.43□□□□□ -0.1
MRPL55-223ENST00000459783 NUTM2BA6NNL0 878 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 NUTM2EB1AL46 878 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 NUTM2AQ8IVF1 878 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
MRPL55-223ENST00000459783 RGS17Q9UGC6 210 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-223ENST00000459783 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
MRPL55-223ENST00000459783 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
MRPL55-223ENST00000459783 TMF1P82094 1093 aa14.41□□□□□ -0.1
MRPL55-223ENST00000459783 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms