RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
CCDC66-209ENST00000459746 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
CCDC66-209ENST00000459746 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
CCDC66-209ENST00000459746 HLA-CQ95604 372 aa12.61□□□□□ -0.39
CCDC66-209ENST00000459746 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
CCDC66-209ENST00000459746 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
CCDC66-209ENST00000459746 SLC6A16Q9GZN6 736 aa12.6□□□□□ -0.39
CCDC66-209ENST00000459746 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
CCDC66-209ENST00000459746 TLL1O43897 1013 aa12.59□□□□□ -0.39
CCDC66-209ENST00000459746 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
CCDC66-209ENST00000459746 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
CCDC66-209ENST00000459746 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
CCDC66-209ENST00000459746 CLK2P49760 499 aaKnown RBP12.58□□□□□ -0.4
CCDC66-209ENST00000459746 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
CCDC66-209ENST00000459746 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
CCDC66-209ENST00000459746 RETREG3Q86VR2 466 aa12.58□□□□□ -0.4
CCDC66-209ENST00000459746 RGS20O76081 388 aa12.57□□□□□ -0.4
CCDC66-209ENST00000459746 MTMR2Q13614 643 aa12.57□□□□□ -0.4
CCDC66-209ENST00000459746 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
CCDC66-209ENST00000459746 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
CCDC66-209ENST00000459746 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
CCDC66-209ENST00000459746 PCDHB15Q9Y5E8 787 aa12.55□□□□□ -0.4
CCDC66-209ENST00000459746 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
CCDC66-209ENST00000459746 S1PR4O95977 384 aa12.53□□□□□ -0.4
CCDC66-209ENST00000459746 LILRB3O75022 631 aa12.52□□□□□ -0.41
CCDC66-209ENST00000459746 MMP16P51512 607 aa12.52□□□□□ -0.41
CCDC66-209ENST00000459746 ANKLE1Q8NAG6 615 aa12.52□□□□□ -0.41
CCDC66-209ENST00000459746 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
CCDC66-209ENST00000459746 PCMTD1Q96MG8 357 aaPredicted RBP12.52□□□□□ -0.41
CCDC66-209ENST00000459746 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
CCDC66-209ENST00000459746 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-209ENST00000459746 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-209ENST00000459746 HRCP23327 699 aa12.51□□□□□ -0.41
CCDC66-209ENST00000459746 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-209ENST00000459746 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
CCDC66-209ENST00000459746 NUTM2AQ8IVF1 878 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-209ENST00000459746 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
CCDC66-209ENST00000459746 CSPP1Q1MSJ5 1256 aa12.49□□□□□ -0.41
CCDC66-209ENST00000459746 PRR7Q8TB68 274 aa12.49□□□□□ -0.41
CCDC66-209ENST00000459746 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC66-209ENST00000459746 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
CCDC66-209ENST00000459746 JUNDP17535 347 aa12.47□□□□□ -0.41
CCDC66-209ENST00000459746 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-209ENST00000459746 QPCTQ16769 361 aa12.46□□□□□ -0.41
CCDC66-209ENST00000459746 PPP2R2DQ66LE6 453 aa12.46□□□□□ -0.41
CCDC66-209ENST00000459746 CABLES1Q8TDN4 633 aa12.45□□□□□ -0.42
CCDC66-209ENST00000459746 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
CCDC66-209ENST00000459746 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
CCDC66-209ENST00000459746 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
CCDC66-209ENST00000459746 CFAP99D6REC4 459 aa12.41□□□□□ -0.42
CCDC66-209ENST00000459746 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
CCDC66-209ENST00000459746 PTPRNQ16849 979 aa12.41□□□□□ -0.42
CCDC66-209ENST00000459746 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
CCDC66-209ENST00000459746 FCF1Q9Y324 198 aaKnown RBP12.41□□□□□ -0.42
CCDC66-209ENST00000459746 LYPD8Q6UX82 237 aa12.4□□□□□ -0.42
CCDC66-209ENST00000459746 RPIAP49247 311 aa12.39□□□□□ -0.43
CCDC66-209ENST00000459746 ZBTB24O43167 697 aaPredicted RBP12.38□□□□□ -0.43
CCDC66-209ENST00000459746 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
CCDC66-209ENST00000459746 CCNYL3P0C7X3 344 aa12.37□□□□□ -0.43
CCDC66-209ENST00000459746 SLC19A1P41440 591 aa12.37□□□□□ -0.43
CCDC66-209ENST00000459746 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
CCDC66-209ENST00000459746 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
CCDC66-209ENST00000459746 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
CCDC66-209ENST00000459746 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
CCDC66-209ENST00000459746 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
CCDC66-209ENST00000459746 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
CCDC66-209ENST00000459746 TSC1Q92574 1164 aa12.35□□□□□ -0.43
CCDC66-209ENST00000459746 RFC5P40937 340 aa12.34□□□□□ -0.43
CCDC66-209ENST00000459746 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
CCDC66-209ENST00000459746 PLA2G2CQ5R387 149 aa12.31□□□□□ -0.44
CCDC66-209ENST00000459746 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
CCDC66-209ENST00000459746 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
CCDC66-209ENST00000459746 AP1G2O75843 785 aa12.29□□□□□ -0.44
CCDC66-209ENST00000459746 CTDSPL2Q05D32 466 aa12.29□□□□□ -0.44
CCDC66-209ENST00000459746 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
CCDC66-209ENST00000459746 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
CCDC66-209ENST00000459746 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
CCDC66-209ENST00000459746 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
CCDC66-209ENST00000459746 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-209ENST00000459746 CTHP32929 405 aa12.27□□□□□ -0.45
CCDC66-209ENST00000459746 F12P00748 615 aaPredicted RBP12.26□□□□□ -0.45
CCDC66-209ENST00000459746 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
CCDC66-209ENST00000459746 TRIM32Q13049 653 aa12.25□□□□□ -0.45
CCDC66-209ENST00000459746 PTCRAQ6ISU1 281 aaPredicted RBP12.25□□□□□ -0.45
CCDC66-209ENST00000459746 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
CCDC66-209ENST00000459746 WNT7BP56706 349 aa12.23□□□□□ -0.45
CCDC66-209ENST00000459746 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
CCDC66-209ENST00000459746 ZNF697Q5TEC3 545 aa12.22□□□□□ -0.45
CCDC66-209ENST00000459746 SOCS7O14512 581 aa12.21□□□□□ -0.45
CCDC66-209ENST00000459746 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
CCDC66-209ENST00000459746 APBB1O00213 710 aa12.2□□□□□ -0.46
CCDC66-209ENST00000459746 LRRN4Q8WUT4 740 aa12.2□□□□□ -0.46
CCDC66-209ENST00000459746 MAP10Q9P2G4 905 aa12.2□□□□□ -0.46
CCDC66-209ENST00000459746 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
CCDC66-209ENST00000459746 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.46
CCDC66-209ENST00000459746 WNT7AO00755 349 aa12.16□□□□□ -0.46
CCDC66-209ENST00000459746 PRR20EP86478 221 aa12.16□□□□□ -0.46
CCDC66-209ENST00000459746 PRR20CP86479 221 aa12.16□□□□□ -0.46
CCDC66-209ENST00000459746 PRR20DP86480 221 aa12.16□□□□□ -0.46
CCDC66-209ENST00000459746 PRR20BP86481 221 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms