RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 UPF1Q92900 1129 aaKnown RBP eCLIP24.94■■□□□ 1.58
NELFA-211ENST00000458616 LRPPRCP42704 1394 aaKnown RBP24.93■■□□□ 1.58
NELFA-211ENST00000458616 QTRT2Q9H974 415 aaKnown RBP24.92■■□□□ 1.58
NELFA-211ENST00000458616 ABCC11Q96J66 1382 aa24.92■■□□□ 1.58
NELFA-211ENST00000458616 ADAMTS2O95450 1211 aa24.91■■□□□ 1.58
NELFA-211ENST00000458616 TECPR2O15040 1411 aa24.91■■□□□ 1.58
NELFA-211ENST00000458616 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
NELFA-211ENST00000458616 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
NELFA-211ENST00000458616 IFT172Q9UG01 1749 aa24.89■■□□□ 1.58
NELFA-211ENST00000458616 PIK3C2GO75747 1445 aa24.89■■□□□ 1.58
NELFA-211ENST00000458616 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
NELFA-211ENST00000458616 NGLY1Q96IV0 654 aa24.88■■□□□ 1.57
NELFA-211ENST00000458616 CDC42BPGQ6DT37 1551 aa24.87■■□□□ 1.57
NELFA-211ENST00000458616 NUTM2FA1L443 756 aa24.86■■□□□ 1.57
NELFA-211ENST00000458616 FOXO3O43524 673 aa24.86■■□□□ 1.57
NELFA-211ENST00000458616 C14orf93Q9H972 538 aaKnown RBP24.86■■□□□ 1.57
NELFA-211ENST00000458616 RBM6P78332 1123 aaKnown RBP24.85■■□□□ 1.57
NELFA-211ENST00000458616 XPCQ01831 940 aaPredicted RBP24.84■■□□□ 1.57
NELFA-211ENST00000458616 YTHDC2Q9H6S0 1430 aaKnown RBP24.84■■□□□ 1.57
NELFA-211ENST00000458616 NPHP3Q7Z494 1330 aa24.84■■□□□ 1.57
NELFA-211ENST00000458616 SIRT1Q96EB6 747 aa24.83■■□□□ 1.57
NELFA-211ENST00000458616 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.56
NELFA-211ENST00000458616 PXDNQ92626 1479 aa24.83■■□□□ 1.56
NELFA-211ENST00000458616 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
NELFA-211ENST00000458616 FNBP4Q8N3X1 1017 aaPredicted RBP24.82■■□□□ 1.56
NELFA-211ENST00000458616 RGS12O14924 1447 aa24.81■■□□□ 1.56
NELFA-211ENST00000458616 NRXN1Q9ULB1 1477 aa24.81■■□□□ 1.56
NELFA-211ENST00000458616 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
NELFA-211ENST00000458616 MYOM2P54296 1465 aa24.79■■□□□ 1.56
NELFA-211ENST00000458616 USP21Q9UK80 565 aa24.79■■□□□ 1.56
NELFA-211ENST00000458616 COL22A1Q8NFW1 1626 aaPredicted RBP24.79■■□□□ 1.56
NELFA-211ENST00000458616 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
NELFA-211ENST00000458616 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
NELFA-211ENST00000458616 DHX57Q6P158 1386 aaKnown RBP24.73■■□□□ 1.55
NELFA-211ENST00000458616 FMN2Q9NZ56 1722 aa24.72■■□□□ 1.55
NELFA-211ENST00000458616 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
NELFA-211ENST00000458616 BCL9LQ86UU0 1499 aa24.71■■□□□ 1.55
NELFA-211ENST00000458616 ATRNO75882 1429 aa24.71■■□□□ 1.55
NELFA-211ENST00000458616 PRAM1Q96QH2 718 aa24.71■■□□□ 1.55
NELFA-211ENST00000458616 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.54
NELFA-211ENST00000458616 SAFB2Q14151 953 aaKnown RBP eCLIP24.69■■□□□ 1.54
NELFA-211ENST00000458616 PHF8Q9UPP1 1060 aa24.67■■□□□ 1.54
NELFA-211ENST00000458616 KDM2AQ9Y2K7 1162 aa24.64■■□□□ 1.54
NELFA-211ENST00000458616 RGPD8O14715 1765 aaPredicted RBP24.64■■□□□ 1.53
NELFA-211ENST00000458616 ADGRB1O14514 1584 aa24.63■■□□□ 1.53
NELFA-211ENST00000458616 KIF1AQ12756 1690 aa24.62■■□□□ 1.53
NELFA-211ENST00000458616 DLC1Q96QB1 1528 aa24.62■■□□□ 1.53
NELFA-211ENST00000458616 HRCP23327 699 aa24.62■■□□□ 1.53
NELFA-211ENST00000458616 GJD4Q96KN9 370 aaPredicted RBP24.62■■□□□ 1.53
NELFA-211ENST00000458616 POGKQ9P215 609 aa24.62■■□□□ 1.53
NELFA-211ENST00000458616 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
NELFA-211ENST00000458616 MARF1Q9Y4F3 1742 aaKnown RBP24.61■■□□□ 1.53
NELFA-211ENST00000458616 CABLES1Q8TDN4 633 aa24.61■■□□□ 1.53
NELFA-211ENST00000458616 DCAF11Q8TEB1 546 aa24.61■■□□□ 1.53
NELFA-211ENST00000458616 PSME1Q06323 249 aa24.59■■□□□ 1.53
NELFA-211ENST00000458616 UNC5CLQ8IV45 518 aa24.59■■□□□ 1.53
NELFA-211ENST00000458616 SLIT2O94813 1529 aa24.59■■□□□ 1.53
NELFA-211ENST00000458616 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
NELFA-211ENST00000458616 PMFBP1Q8TBY8 1022 aa24.58■■□□□ 1.53
NELFA-211ENST00000458616 HIRIP3Q9BW71 556 aaPredicted RBP24.58■■□□□ 1.53
NELFA-211ENST00000458616 SBNO1A3KN83 1393 aa24.57■■□□□ 1.52
NELFA-211ENST00000458616 TNS3Q68CZ2 1445 aa24.57■■□□□ 1.52
NELFA-211ENST00000458616 USP32Q8NFA0 1604 aa24.57■■□□□ 1.52
NELFA-211ENST00000458616 ANKARQ7Z5J8 1434 aa24.55■■□□□ 1.52
NELFA-211ENST00000458616 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
NELFA-211ENST00000458616 PRR36Q9H6K5 1346 aa24.55■■□□□ 1.52
NELFA-211ENST00000458616 PLEKHG5O94827 1062 aa24.54■■□□□ 1.52
NELFA-211ENST00000458616 STAC3Q96MF2 364 aa24.53■■□□□ 1.52
NELFA-211ENST00000458616 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
NELFA-211ENST00000458616 ADGRB2O60241 1585 aa24.52■■□□□ 1.52
NELFA-211ENST00000458616 EP400Q96L91 3159 aa24.52■■□□□ 1.52
NELFA-211ENST00000458616 LMOD2Q6P5Q4 547 aa24.52■■□□□ 1.52
NELFA-211ENST00000458616 GLI3P10071 1580 aa24.51■■□□□ 1.51
NELFA-211ENST00000458616 WASLO00401 505 aaPredicted RBP24.51■■□□□ 1.51
NELFA-211ENST00000458616 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.5■■□□□ 1.51
NELFA-211ENST00000458616 FAM83GA6ND36 823 aa24.5■■□□□ 1.51
NELFA-211ENST00000458616 ARHGEF10O15013 1369 aa24.49■■□□□ 1.51
NELFA-211ENST00000458616 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
NELFA-211ENST00000458616 VPS72Q15906 364 aa24.48■■□□□ 1.51
NELFA-211ENST00000458616 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
NELFA-211ENST00000458616 CCDC125Q86Z20 511 aa24.44■■□□□ 1.5
NELFA-211ENST00000458616 SEPT12Q8IYM1 358 aa24.44■■□□□ 1.5
NELFA-211ENST00000458616 TULP4Q9NRJ4 1543 aa24.44■■□□□ 1.5
NELFA-211ENST00000458616 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
NELFA-211ENST00000458616 ABCA3Q99758 1704 aa24.42■■□□□ 1.5
NELFA-211ENST00000458616 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
NELFA-211ENST00000458616 EIF3AQ14152 1382 aaKnown RBP24.42■■□□□ 1.5
NELFA-211ENST00000458616 GPRASP1Q5JY77 1395 aa24.42■■□□□ 1.5
NELFA-211ENST00000458616 NUDT16Q96DE0 195 aaKnown RBP24.4■■□□□ 1.5
NELFA-211ENST00000458616 NGDNQ8NEJ9 315 aaKnown RBP24.39■■□□□ 1.49
NELFA-211ENST00000458616 PLCH1Q4KWH8 1693 aa24.39■■□□□ 1.49
NELFA-211ENST00000458616 ALS2Q96Q42 1657 aa24.39■■□□□ 1.49
NELFA-211ENST00000458616 NBPF1Q3BBV0 1214 aa24.38■■□□□ 1.49
NELFA-211ENST00000458616 NWD2Q9ULI1 1742 aa24.38■■□□□ 1.49
NELFA-211ENST00000458616 CDK19Q9BWU1 502 aa24.37■■□□□ 1.49
NELFA-211ENST00000458616 BTG4Q9NY30 223 aa24.37■■□□□ 1.49
NELFA-211ENST00000458616 CCDC9Q9Y3X0 531 aaKnown RBP24.37■■□□□ 1.49
NELFA-211ENST00000458616 ARHGEF28Q8N1W1 1705 aaKnown RBP24.37■■□□□ 1.49
NELFA-211ENST00000458616 BRWD3Q6RI45 1802 aa24.37■■□□□ 1.49
NELFA-211ENST00000458616 ATP7BP35670 1465 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms