RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 POGKQ9P215 609 aa23.79■■□□□ 1.4
TRIM39-211ENST00000458516 ADGRL3Q9HAR2 1447 aa23.78■■□□□ 1.4
TRIM39-211ENST00000458516 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.4
TRIM39-211ENST00000458516 ST20-MTHFSA0A0A6YYL1 179 aa23.76■■□□□ 1.39
TRIM39-211ENST00000458516 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
TRIM39-211ENST00000458516 CDC42BPGQ6DT37 1551 aa23.76■■□□□ 1.39
TRIM39-211ENST00000458516 SBNO2Q9Y2G9 1366 aa23.76■■□□□ 1.39
TRIM39-211ENST00000458516 HSPA5P11021 654 aaKnown RBP23.75■■□□□ 1.39
TRIM39-211ENST00000458516 MINK1Q8N4C8 1332 aaPredicted RBP23.73■■□□□ 1.39
TRIM39-211ENST00000458516 TULP4Q9NRJ4 1543 aa23.73■■□□□ 1.39
TRIM39-211ENST00000458516 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
TRIM39-211ENST00000458516 IQSEC2Q5JU85 1478 aa23.71■■□□□ 1.39
TRIM39-211ENST00000458516 TESK2Q96S53 571 aa23.71■■□□□ 1.39
TRIM39-211ENST00000458516 DCCP43146 1447 aa23.7■■□□□ 1.38
TRIM39-211ENST00000458516 C14orf37Q86TY3 774 aa23.7■■□□□ 1.38
TRIM39-211ENST00000458516 MSH6P52701 1360 aa23.69■■□□□ 1.38
TRIM39-211ENST00000458516 HIRIP3Q9BW71 556 aaPredicted RBP23.69■■□□□ 1.38
TRIM39-211ENST00000458516 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
TRIM39-211ENST00000458516 RGPD8O14715 1765 aaPredicted RBP23.66■■□□□ 1.38
TRIM39-211ENST00000458516 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
TRIM39-211ENST00000458516 CERKQ8TCT0 537 aa23.65■■□□□ 1.38
TRIM39-211ENST00000458516 WASLO00401 505 aaPredicted RBP23.63■■□□□ 1.37
TRIM39-211ENST00000458516 DISP3Q9P2K9 1392 aa23.63■■□□□ 1.37
TRIM39-211ENST00000458516 TOPAZ1Q8N9V7 1692 aa23.62■■□□□ 1.37
TRIM39-211ENST00000458516 EVC2Q86UK5 1308 aa23.61■■□□□ 1.37
TRIM39-211ENST00000458516 MST1RQ04912 1400 aa23.61■■□□□ 1.37
TRIM39-211ENST00000458516 ITSN1Q15811 1721 aa23.61■■□□□ 1.37
TRIM39-211ENST00000458516 CDK19Q9BWU1 502 aa23.6■■□□□ 1.37
TRIM39-211ENST00000458516 ATP7BP35670 1465 aa23.6■■□□□ 1.37
TRIM39-211ENST00000458516 SLC24A1O60721 1099 aa23.59■■□□□ 1.37
TRIM39-211ENST00000458516 ATF3P18847 181 aa23.59■■□□□ 1.37
TRIM39-211ENST00000458516 TMF1P82094 1093 aa23.59■■□□□ 1.37
TRIM39-211ENST00000458516 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
TRIM39-211ENST00000458516 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
TRIM39-211ENST00000458516 PRR36Q9H6K5 1346 aa23.57■■□□□ 1.36
TRIM39-211ENST00000458516 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
TRIM39-211ENST00000458516 CABP2Q9NPB3 220 aa23.56■■□□□ 1.36
TRIM39-211ENST00000458516 MYOM1P52179 1685 aa23.55■■□□□ 1.36
TRIM39-211ENST00000458516 SRPK2P78362 688 aaKnown RBP23.55■■□□□ 1.36
TRIM39-211ENST00000458516 NUTM2FA1L443 756 aa23.54■■□□□ 1.36
TRIM39-211ENST00000458516 C11orf95C9JLR9 678 aaPredicted RBP23.54■■□□□ 1.36
TRIM39-211ENST00000458516 PUS7Q96PZ0 661 aaKnown RBP23.52■■□□□ 1.36
TRIM39-211ENST00000458516 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
TRIM39-211ENST00000458516 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
TRIM39-211ENST00000458516 NUDT16Q96DE0 195 aaKnown RBP23.51■■□□□ 1.35
TRIM39-211ENST00000458516 ROBO1Q9Y6N7 1651 aa23.5■■□□□ 1.35
TRIM39-211ENST00000458516 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
TRIM39-211ENST00000458516 SLAIN2Q9P270 581 aa23.49■■□□□ 1.35
TRIM39-211ENST00000458516 KIF7Q2M1P5 1343 aa23.49■■□□□ 1.35
TRIM39-211ENST00000458516 TOM1O60784 492 aa23.48■■□□□ 1.35
TRIM39-211ENST00000458516 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
TRIM39-211ENST00000458516 PPIP5K1Q6PFW1 1433 aa23.47■■□□□ 1.35
TRIM39-211ENST00000458516 AKAP12Q02952 1782 aa23.47■■□□□ 1.35
TRIM39-211ENST00000458516 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
TRIM39-211ENST00000458516 CCDC61Q9Y6R9 512 aa23.46■■□□□ 1.35
TRIM39-211ENST00000458516 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.34
TRIM39-211ENST00000458516 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
TRIM39-211ENST00000458516 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
TRIM39-211ENST00000458516 ESCO1Q5FWF5 840 aa23.44■■□□□ 1.34
TRIM39-211ENST00000458516 BRINP3Q76B58 766 aa23.43■■□□□ 1.34
TRIM39-211ENST00000458516 NINLQ9Y2I6 1382 aa23.42■■□□□ 1.34
TRIM39-211ENST00000458516 POLR3GLQ9BT43 218 aa23.42■■□□□ 1.34
TRIM39-211ENST00000458516 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
TRIM39-211ENST00000458516 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
TRIM39-211ENST00000458516 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
TRIM39-211ENST00000458516 PLEKHG3A1L390 1219 aa23.41■■□□□ 1.34
TRIM39-211ENST00000458516 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
TRIM39-211ENST00000458516 PMFBP1Q8TBY8 1022 aa23.4■■□□□ 1.34
TRIM39-211ENST00000458516 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
TRIM39-211ENST00000458516 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
TRIM39-211ENST00000458516 AHDC1Q5TGY3 1603 aaPredicted RBP23.39■■□□□ 1.33
TRIM39-211ENST00000458516 ZNF316A6NFI3 1004 aaPredicted RBP23.38■■□□□ 1.33
TRIM39-211ENST00000458516 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
TRIM39-211ENST00000458516 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
TRIM39-211ENST00000458516 NRKQ7Z2Y5 1582 aa23.37■■□□□ 1.33
TRIM39-211ENST00000458516 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
TRIM39-211ENST00000458516 TRPM3Q9HCF6 1732 aaPredicted RBP23.36■■□□□ 1.33
TRIM39-211ENST00000458516 ACEP12821 1306 aa23.36■■□□□ 1.33
TRIM39-211ENST00000458516 PHLPP1O60346 1717 aa23.35■■□□□ 1.33
TRIM39-211ENST00000458516 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
TRIM39-211ENST00000458516 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
TRIM39-211ENST00000458516 PXDNQ92626 1479 aa23.34■■□□□ 1.33
TRIM39-211ENST00000458516 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
TRIM39-211ENST00000458516 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
TRIM39-211ENST00000458516 DDX17Q92841 729 aaKnown RBP23.33■■□□□ 1.33
TRIM39-211ENST00000458516 FOXO3O43524 673 aa23.32■■□□□ 1.32
TRIM39-211ENST00000458516 USP6P35125 1406 aa23.32■■□□□ 1.32
TRIM39-211ENST00000458516 NPHP3Q7Z494 1330 aa23.32■■□□□ 1.32
TRIM39-211ENST00000458516 COL16A1Q07092 1604 aaPredicted RBP23.31■■□□□ 1.32
TRIM39-211ENST00000458516 KTN1Q86UP2 1357 aaKnown RBP23.29■■□□□ 1.32
TRIM39-211ENST00000458516 HDGFL2Q7Z4V5 671 aaPredicted RBP23.29■■□□□ 1.32
TRIM39-211ENST00000458516 TERF2IPQ9NYB0 399 aa23.29■■□□□ 1.32
TRIM39-211ENST00000458516 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
TRIM39-211ENST00000458516 SSH2Q76I76 1423 aa23.28■■□□□ 1.32
TRIM39-211ENST00000458516 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
TRIM39-211ENST00000458516 SOS2Q07890 1332 aaPredicted RBP23.28■■□□□ 1.32
TRIM39-211ENST00000458516 ZNF692Q9BU19 519 aaPredicted RBP23.27■■□□□ 1.32
TRIM39-211ENST00000458516 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
TRIM39-211ENST00000458516 EDC4Q6P2E9 1401 aaKnown RBP23.26■■□□□ 1.31
TRIM39-211ENST00000458516 PSME1Q06323 249 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms