RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 GLI2P10070 1586 aa26.93■■□□□ 1.9
CRAT-207ENST00000458362 NGEFQ8N5V2 710 aa26.92■■□□□ 1.9
CRAT-207ENST00000458362 NEO1Q92859 1461 aa26.92■■□□□ 1.9
CRAT-207ENST00000458362 PIK3C2BO00750 1634 aa26.92■■□□□ 1.9
CRAT-207ENST00000458362 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
CRAT-207ENST00000458362 NUTM2DQ5VT03 806 aaPredicted RBP26.91■■□□□ 1.9
CRAT-207ENST00000458362 WWC1Q8IX03 1113 aa26.91■■□□□ 1.9
CRAT-207ENST00000458362 ARHGEF28Q8N1W1 1705 aaKnown RBP26.9■■□□□ 1.9
CRAT-207ENST00000458362 RAPGEF3O95398 923 aa26.9■■□□□ 1.9
CRAT-207ENST00000458362 NEXMIFQ5QGS0 1516 aa26.89■■□□□ 1.89
CRAT-207ENST00000458362 TULP4Q9NRJ4 1543 aa26.88■■□□□ 1.89
CRAT-207ENST00000458362 DIP2CQ9Y2E4 1556 aa26.87■■□□□ 1.89
CRAT-207ENST00000458362 IQSEC2Q5JU85 1478 aa26.86■■□□□ 1.89
CRAT-207ENST00000458362 RRP7AQ9Y3A4 280 aaKnown RBP26.85■■□□□ 1.89
CRAT-207ENST00000458362 RUNDC1Q96C34 613 aa26.84■■□□□ 1.89
CRAT-207ENST00000458362 NEUROD2Q15784 382 aa26.83■■□□□ 1.89
CRAT-207ENST00000458362 CGNL1Q0VF96 1302 aa26.82■■□□□ 1.88
CRAT-207ENST00000458362 MTHFSP49914 203 aa26.82■■□□□ 1.88
CRAT-207ENST00000458362 LAS1LQ9Y4W2 734 aaKnown RBP26.82■■□□□ 1.88
CRAT-207ENST00000458362 C8orf34Q49A92 452 aa26.82■■□□□ 1.88
CRAT-207ENST00000458362 TCP11L2Q8N4U5 519 aa26.81■■□□□ 1.88
CRAT-207ENST00000458362 EVC2Q86UK5 1308 aa26.81■■□□□ 1.88
CRAT-207ENST00000458362 ARHGAP31Q2M1Z3 1444 aa26.81■■□□□ 1.88
CRAT-207ENST00000458362 VGFO15240 615 aaPredicted RBP26.81■■□□□ 1.88
CRAT-207ENST00000458362 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
CRAT-207ENST00000458362 FAM161AQ3B820 660 aa26.8■■□□□ 1.88
CRAT-207ENST00000458362 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
CRAT-207ENST00000458362 RGS3P49796 1198 aa26.79■■□□□ 1.88
CRAT-207ENST00000458362 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
CRAT-207ENST00000458362 ANKRD36BQ8N2N9 1353 aa26.78■■□□□ 1.88
CRAT-207ENST00000458362 IGHDP01880 384 aa26.78■■□□□ 1.88
CRAT-207ENST00000458362 PDE3AQ14432 1141 aa26.78■■□□□ 1.88
CRAT-207ENST00000458362 RICTORQ6R327 1708 aa26.78■■□□□ 1.88
CRAT-207ENST00000458362 PANK1Q8TE04 598 aa26.77■■□□□ 1.88
CRAT-207ENST00000458362 DDRGK1Q96HY6 314 aa26.77■■□□□ 1.88
CRAT-207ENST00000458362 CABP2Q9NPB3 220 aa26.77■■□□□ 1.88
CRAT-207ENST00000458362 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
CRAT-207ENST00000458362 IDI1Q13907 227 aa26.77■■□□□ 1.88
CRAT-207ENST00000458362 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
CRAT-207ENST00000458362 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
CRAT-207ENST00000458362 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
CRAT-207ENST00000458362 COG6Q9Y2V7 657 aa26.74■■□□□ 1.87
CRAT-207ENST00000458362 CFAP53Q96M91 514 aa26.74■■□□□ 1.87
CRAT-207ENST00000458362 CANXP27824 592 aaKnown RBP26.73■■□□□ 1.87
CRAT-207ENST00000458362 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
CRAT-207ENST00000458362 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
CRAT-207ENST00000458362 ZFYVE9O95405 1425 aa26.72■■□□□ 1.87
CRAT-207ENST00000458362 NSD2O96028 1365 aa26.72■■□□□ 1.87
CRAT-207ENST00000458362 WDR63Q8IWG1 891 aa26.72■■□□□ 1.87
CRAT-207ENST00000458362 FRAT1Q92837 279 aaPredicted RBP26.7■■□□□ 1.87
CRAT-207ENST00000458362 CLUAP1Q96AJ1 413 aa26.7■■□□□ 1.87
CRAT-207ENST00000458362 STK26Q9P289 416 aa26.7■■□□□ 1.86
CRAT-207ENST00000458362 NEFMP07197 916 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 CCDC27Q2M243 656 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 TNNQ9UQP3 1299 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 PREX1Q8TCU6 1659 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 SLC4A3P48751 1232 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 SLC52A1Q9NWF4 448 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 A0A1W2PP64 1363 aa26.68■■□□□ 1.86
CRAT-207ENST00000458362 TMEM131LA2VDJ0 1609 aa26.67■■□□□ 1.86
CRAT-207ENST00000458362 ADGRB2O60241 1585 aa26.66■■□□□ 1.86
CRAT-207ENST00000458362 U2AF1L5P0DN76 240 aaPredicted RBP26.66■■□□□ 1.86
CRAT-207ENST00000458362 U2AF1Q01081 240 aaKnown RBP eCLIP26.66■■□□□ 1.86
CRAT-207ENST00000458362 VIRMAQ69YN4 1812 aaKnown RBP26.66■■□□□ 1.86
CRAT-207ENST00000458362 PTPRMP28827 1452 aa26.65■■□□□ 1.86
CRAT-207ENST00000458362 ABCC11Q96J66 1382 aa26.65■■□□□ 1.86
CRAT-207ENST00000458362 PPM1GO15355 546 aaPredicted RBP26.65■■□□□ 1.86
CRAT-207ENST00000458362 RLBP1P12271 317 aa26.65■■□□□ 1.86
CRAT-207ENST00000458362 BCL2L13Q9BXK5 485 aa26.64■■□□□ 1.86
CRAT-207ENST00000458362 SRPK2P78362 688 aaKnown RBP26.63■■□□□ 1.85
CRAT-207ENST00000458362 GGNBP2Q9H3C7 697 aa26.61■■□□□ 1.85
CRAT-207ENST00000458362 USP35Q9P2H5 1018 aa26.6■■□□□ 1.85
CRAT-207ENST00000458362 MINK1Q8N4C8 1332 aaPredicted RBP26.6■■□□□ 1.85
CRAT-207ENST00000458362 COL3A1P02461 1466 aaPredicted RBP26.6■■□□□ 1.85
CRAT-207ENST00000458362 NCBP3Q53F19 620 aaKnown RBP26.59■■□□□ 1.85
CRAT-207ENST00000458362 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
CRAT-207ENST00000458362 MYH16Q9H6N6 1097 aa26.58■■□□□ 1.85
CRAT-207ENST00000458362 CD163L1Q9NR16 1453 aa26.58■■□□□ 1.85
CRAT-207ENST00000458362 ANKRD26Q9UPS8 1709 aa26.58■■□□□ 1.85
CRAT-207ENST00000458362 PCDHB15Q9Y5E8 787 aa26.58■■□□□ 1.85
CRAT-207ENST00000458362 PRAM1Q96QH2 718 aa26.58■■□□□ 1.84
CRAT-207ENST00000458362 YTHDC2Q9H6S0 1430 aaKnown RBP26.57■■□□□ 1.84
CRAT-207ENST00000458362 FBXO31Q5XUX0 539 aaPredicted RBP26.56■■□□□ 1.84
CRAT-207ENST00000458362 PLEKHF1Q96S99 279 aa26.56■■□□□ 1.84
CRAT-207ENST00000458362 MAPK8IP3Q9UPT6 1336 aa26.55■■□□□ 1.84
CRAT-207ENST00000458362 NLRP1Q9C000 1473 aa26.55■■□□□ 1.84
CRAT-207ENST00000458362 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
CRAT-207ENST00000458362 FYB1O15117 783 aa26.54■■□□□ 1.84
CRAT-207ENST00000458362 ATAD2Q6PL18 1390 aa26.54■■□□□ 1.84
CRAT-207ENST00000458362 USP19O94966 1318 aa26.54■■□□□ 1.84
CRAT-207ENST00000458362 TSR2Q969E8 191 aaKnown RBP26.53■■□□□ 1.84
CRAT-207ENST00000458362 DAXXQ9UER7 740 aaPredicted RBP26.53■■□□□ 1.84
CRAT-207ENST00000458362 POGKQ9P215 609 aa26.53■■□□□ 1.84
CRAT-207ENST00000458362 ALKQ9UM73 1620 aa26.52■■□□□ 1.84
CRAT-207ENST00000458362 PMFBP1Q8TBY8 1022 aa26.52■■□□□ 1.84
CRAT-207ENST00000458362 AAMPQ13685 434 aa26.51■■□□□ 1.84
CRAT-207ENST00000458362 SEC24BO95487 1268 aa26.51■■□□□ 1.83
CRAT-207ENST00000458362 TERF2IPQ9NYB0 399 aa26.51■■□□□ 1.83
CRAT-207ENST00000458362 MED14O60244 1454 aa26.5■■□□□ 1.83
CRAT-207ENST00000458362 TMPOP42166 694 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms