RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
HMGB4-202ENST00000458277 PTGDRQ13258 359 aa8.39□□□□□ -1.07
HMGB4-202ENST00000458277 FAM160A2Q8N612 972 aaPredicted RBP8.39□□□□□ -1.07
HMGB4-202ENST00000458277 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
HMGB4-202ENST00000458277 CCDC180Q9P1Z9 1646 aa8.39□□□□□ -1.07
HMGB4-202ENST00000458277 DCAF1Q9Y4B6 1507 aa8.38□□□□□ -1.07
HMGB4-202ENST00000458277 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
HMGB4-202ENST00000458277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
HMGB4-202ENST00000458277 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-202ENST00000458277 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
HMGB4-202ENST00000458277 MORN1Q5T089 497 aa8.35□□□□□ -1.07
HMGB4-202ENST00000458277 KCTD17Q8N5Z5 321 aa8.35□□□□□ -1.07
HMGB4-202ENST00000458277 TRIM32Q13049 653 aa8.34□□□□□ -1.07
HMGB4-202ENST00000458277 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
HMGB4-202ENST00000458277 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
HMGB4-202ENST00000458277 FECHP22830 423 aa8.32□□□□□ -1.08
HMGB4-202ENST00000458277 FUT2Q10981 343 aa8.32□□□□□ -1.08
HMGB4-202ENST00000458277 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
HMGB4-202ENST00000458277 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
HMGB4-202ENST00000458277 H3BM21 787 aa8.31□□□□□ -1.08
HMGB4-202ENST00000458277 BMP1P13497 986 aa8.31□□□□□ -1.08
HMGB4-202ENST00000458277 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
HMGB4-202ENST00000458277 NPAS3Q8IXF0 933 aa8.31□□□□□ -1.08
HMGB4-202ENST00000458277 NUTM2FA1L443 756 aa8.3□□□□□ -1.08
HMGB4-202ENST00000458277 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
HMGB4-202ENST00000458277 ATP6V1AP38606 617 aa8.29□□□□□ -1.08
HMGB4-202ENST00000458277 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
HMGB4-202ENST00000458277 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
HMGB4-202ENST00000458277 ERICH6BQ5W0A0 696 aa8.28□□□□□ -1.08
HMGB4-202ENST00000458277 UBE2Q2Q8WVN8 375 aa8.28□□□□□ -1.08
HMGB4-202ENST00000458277 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
HMGB4-202ENST00000458277 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
HMGB4-202ENST00000458277 OATP04181 439 aa8.26□□□□□ -1.09
HMGB4-202ENST00000458277 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
HMGB4-202ENST00000458277 RC3H1Q5TC82 1133 aaKnown RBP8.26□□□□□ -1.09
HMGB4-202ENST00000458277 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
HMGB4-202ENST00000458277 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
HMGB4-202ENST00000458277 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
HMGB4-202ENST00000458277 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
HMGB4-202ENST00000458277 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
HMGB4-202ENST00000458277 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
HMGB4-202ENST00000458277 CAPN5O15484 640 aaPredicted RBP8.23□□□□□ -1.09
HMGB4-202ENST00000458277 SPRYD3Q8NCJ5 442 aa8.23□□□□□ -1.09
HMGB4-202ENST00000458277 GSK3AP49840 483 aa8.22□□□□□ -1.09
HMGB4-202ENST00000458277 SKOR1P84550 965 aa8.22□□□□□ -1.09
HMGB4-202ENST00000458277 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
HMGB4-202ENST00000458277 FCHSD2O94868 740 aa8.21□□□□□ -1.1
HMGB4-202ENST00000458277 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
HMGB4-202ENST00000458277 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
HMGB4-202ENST00000458277 GDF11O95390 407 aa8.19□□□□□ -1.1
HMGB4-202ENST00000458277 GCGRP47871 477 aa8.19□□□□□ -1.1
HMGB4-202ENST00000458277 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
HMGB4-202ENST00000458277 MMP16P51512 607 aa8.18□□□□□ -1.1
HMGB4-202ENST00000458277 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
HMGB4-202ENST00000458277 WNT7BP56706 349 aa8.17□□□□□ -1.1
HMGB4-202ENST00000458277 RASSF7Q02833 373 aa8.17□□□□□ -1.1
HMGB4-202ENST00000458277 WASF2Q9Y6W5 498 aa8.17□□□□□ -1.1
HMGB4-202ENST00000458277 SOBPA7XYQ1 873 aa8.14□□□□□ -1.11
HMGB4-202ENST00000458277 Q3C1V9 767 aa8.14□□□□□ -1.11
HMGB4-202ENST00000458277 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
HMGB4-202ENST00000458277 EHBP1Q8NDI1 1231 aa8.14□□□□□ -1.11
HMGB4-202ENST00000458277 DXOO77932 396 aaKnown RBP8.13□□□□□ -1.11
HMGB4-202ENST00000458277 SIAH2O43255 324 aa8.12□□□□□ -1.11
HMGB4-202ENST00000458277 VSIG8P0DPA2 414 aa8.12□□□□□ -1.11
HMGB4-202ENST00000458277 SULF1Q8IWU6 871 aa8.12□□□□□ -1.11
HMGB4-202ENST00000458277 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
HMGB4-202ENST00000458277 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
HMGB4-202ENST00000458277 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
HMGB4-202ENST00000458277 ABCC9O60706 1549 aa8.1□□□□□ -1.11
HMGB4-202ENST00000458277 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
HMGB4-202ENST00000458277 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
HMGB4-202ENST00000458277 HIC1Q14526 733 aa8.09□□□□□ -1.11
HMGB4-202ENST00000458277 GPAT2Q6NUI2 795 aa8.09□□□□□ -1.11
HMGB4-202ENST00000458277 PURBQ96QR8 312 aaKnown RBP8.09□□□□□ -1.11
HMGB4-202ENST00000458277 XP32Q5T750 250 aa8.08□□□□□ -1.12
HMGB4-202ENST00000458277 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
HMGB4-202ENST00000458277 RNF225M0QZC1 329 aaPredicted RBP8.07□□□□□ -1.12
HMGB4-202ENST00000458277 SCARF1Q14162 830 aa8.07□□□□□ -1.12
HMGB4-202ENST00000458277 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
HMGB4-202ENST00000458277 PAXIP1Q6ZW49 1069 aaPredicted RBP8.07□□□□□ -1.12
HMGB4-202ENST00000458277 CCER1Q8TC90 406 aaPredicted RBP8.06□□□□□ -1.12
HMGB4-202ENST00000458277 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
HMGB4-202ENST00000458277 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
HMGB4-202ENST00000458277 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
HMGB4-202ENST00000458277 NEFLP07196 543 aa8.04□□□□□ -1.12
HMGB4-202ENST00000458277 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
HMGB4-202ENST00000458277 MYO15BQ96JP2 1530 aa8.03□□□□□ -1.12
HMGB4-202ENST00000458277 HLA-CQ95604 372 aa8.03□□□□□ -1.12
HMGB4-202ENST00000458277 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
HMGB4-202ENST00000458277 TLL2Q9Y6L7 1015 aa8.03□□□□□ -1.12
HMGB4-202ENST00000458277 GNPATO15228 680 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 MAN1A2O60476 641 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 PPFIA3O75145 1194 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 SH3BP2P78314 561 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 NNTQ13423 1086 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
HMGB4-202ENST00000458277 ZCCHC6Q5VYS8 1495 aaKnown RBP8□□□□□ -1.13
HMGB4-202ENST00000458277 JUNDP17535 347 aa8□□□□□ -1.13
HMGB4-202ENST00000458277 IRS1P35568 1242 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms