RNA–Protein interactions for RNA: ENST00000458092.5

ATP2B4-205, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 429 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-205ENST00000458092 TOM1O60784 492 aa13.18□□□□□ -0.3
ATP2B4-205ENST00000458092 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
ATP2B4-205ENST00000458092 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
ATP2B4-205ENST00000458092 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
ATP2B4-205ENST00000458092 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
ATP2B4-205ENST00000458092 EIF3AQ14152 1382 aaKnown RBP13.17□□□□□ -0.3
ATP2B4-205ENST00000458092 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
ATP2B4-205ENST00000458092 MST1RQ04912 1400 aa13.16□□□□□ -0.3
ATP2B4-205ENST00000458092 POGKQ9P215 609 aa13.16□□□□□ -0.3
ATP2B4-205ENST00000458092 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
ATP2B4-205ENST00000458092 ATF3P18847 181 aa13.15□□□□□ -0.3
ATP2B4-205ENST00000458092 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
ATP2B4-205ENST00000458092 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
ATP2B4-205ENST00000458092 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
ATP2B4-205ENST00000458092 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
ATP2B4-205ENST00000458092 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
ATP2B4-205ENST00000458092 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
ATP2B4-205ENST00000458092 TESK2Q96S53 571 aa13.13□□□□□ -0.31
ATP2B4-205ENST00000458092 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
ATP2B4-205ENST00000458092 USP47Q96K76 1375 aa13.11□□□□□ -0.31
ATP2B4-205ENST00000458092 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
ATP2B4-205ENST00000458092 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
ATP2B4-205ENST00000458092 TULP4Q9NRJ4 1543 aa13.09□□□□□ -0.31
ATP2B4-205ENST00000458092 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
ATP2B4-205ENST00000458092 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATP2B4-205ENST00000458092 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
ATP2B4-205ENST00000458092 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
ATP2B4-205ENST00000458092 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
ATP2B4-205ENST00000458092 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
ATP2B4-205ENST00000458092 ATP7BP35670 1465 aa13.07□□□□□ -0.32
ATP2B4-205ENST00000458092 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
ATP2B4-205ENST00000458092 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
ATP2B4-205ENST00000458092 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
ATP2B4-205ENST00000458092 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
ATP2B4-205ENST00000458092 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
ATP2B4-205ENST00000458092 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
ATP2B4-205ENST00000458092 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
ATP2B4-205ENST00000458092 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATP2B4-205ENST00000458092 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
ATP2B4-205ENST00000458092 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
ATP2B4-205ENST00000458092 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
ATP2B4-205ENST00000458092 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
ATP2B4-205ENST00000458092 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
ATP2B4-205ENST00000458092 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
ATP2B4-205ENST00000458092 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
ATP2B4-205ENST00000458092 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
ATP2B4-205ENST00000458092 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
ATP2B4-205ENST00000458092 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
ATP2B4-205ENST00000458092 PXDNQ92626 1479 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
ATP2B4-205ENST00000458092 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 TMF1P82094 1093 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 CDCA8Q53HL2 280 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 CABP2Q9NPB3 220 aa13□□□□□ -0.33
ATP2B4-205ENST00000458092 HSPA1LP34931 641 aa12.99□□□□□ -0.33
ATP2B4-205ENST00000458092 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
ATP2B4-205ENST00000458092 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
ATP2B4-205ENST00000458092 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
ATP2B4-205ENST00000458092 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
ATP2B4-205ENST00000458092 ITSN1Q15811 1721 aa12.98□□□□□ -0.33
ATP2B4-205ENST00000458092 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
ATP2B4-205ENST00000458092 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
ATP2B4-205ENST00000458092 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
ATP2B4-205ENST00000458092 FOXO3O43524 673 aa12.97□□□□□ -0.33
ATP2B4-205ENST00000458092 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
ATP2B4-205ENST00000458092 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
ATP2B4-205ENST00000458092 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
ATP2B4-205ENST00000458092 CABP1Q9NZU7 370 aa12.96□□□□□ -0.33
ATP2B4-205ENST00000458092 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.34
ATP2B4-205ENST00000458092 ACEP12821 1306 aa12.95□□□□□ -0.34
ATP2B4-205ENST00000458092 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
ATP2B4-205ENST00000458092 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 PSME1Q06323 249 aa12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 JCADQ9P266 1359 aa12.94□□□□□ -0.34
ATP2B4-205ENST00000458092 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
ATP2B4-205ENST00000458092 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
ATP2B4-205ENST00000458092 USP6P35125 1406 aa12.93□□□□□ -0.34
ATP2B4-205ENST00000458092 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
ATP2B4-205ENST00000458092 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
ATP2B4-205ENST00000458092 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
ATP2B4-205ENST00000458092 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
ATP2B4-205ENST00000458092 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
ATP2B4-205ENST00000458092 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
ATP2B4-205ENST00000458092 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
ATP2B4-205ENST00000458092 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
ATP2B4-205ENST00000458092 SHPRHQ149N8 1683 aa12.9□□□□□ -0.34
ATP2B4-205ENST00000458092 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
ATP2B4-205ENST00000458092 COL22A1Q8NFW1 1626 aaPredicted RBP12.9□□□□□ -0.34
ATP2B4-205ENST00000458092 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
ATP2B4-205ENST00000458092 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
ATP2B4-205ENST00000458092 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms