RNA–Protein interactions for RNA: ENST00000458012.2

POLR1B-210, Transcript of RNA polymerase I subunit B, humanhuman

TSL 5

Gene POLR1B, Length 923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-210ENST00000458012 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
POLR1B-210ENST00000458012 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
POLR1B-210ENST00000458012 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
POLR1B-210ENST00000458012 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
POLR1B-210ENST00000458012 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
POLR1B-210ENST00000458012 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
POLR1B-210ENST00000458012 QTRT2Q9H974 415 aaKnown RBP13.25□□□□□ -0.29
POLR1B-210ENST00000458012 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
POLR1B-210ENST00000458012 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
POLR1B-210ENST00000458012 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
POLR1B-210ENST00000458012 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-210ENST00000458012 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
POLR1B-210ENST00000458012 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
POLR1B-210ENST00000458012 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
POLR1B-210ENST00000458012 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
POLR1B-210ENST00000458012 PPLO60437 1756 aa13.22□□□□□ -0.29
POLR1B-210ENST00000458012 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
POLR1B-210ENST00000458012 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
POLR1B-210ENST00000458012 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
POLR1B-210ENST00000458012 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
POLR1B-210ENST00000458012 STK26Q9P289 416 aa13.21□□□□□ -0.29
POLR1B-210ENST00000458012 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
POLR1B-210ENST00000458012 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
POLR1B-210ENST00000458012 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
POLR1B-210ENST00000458012 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
POLR1B-210ENST00000458012 USP21Q9UK80 565 aa13.19□□□□□ -0.3
POLR1B-210ENST00000458012 LAMC1P11047 1609 aa13.19□□□□□ -0.3
POLR1B-210ENST00000458012 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
POLR1B-210ENST00000458012 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-210ENST00000458012 FOXO3O43524 673 aa13.17□□□□□ -0.3
POLR1B-210ENST00000458012 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
POLR1B-210ENST00000458012 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
POLR1B-210ENST00000458012 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-210ENST00000458012 ABCC11Q96J66 1382 aa13.16□□□□□ -0.3
POLR1B-210ENST00000458012 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
POLR1B-210ENST00000458012 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
POLR1B-210ENST00000458012 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
POLR1B-210ENST00000458012 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-210ENST00000458012 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
POLR1B-210ENST00000458012 RGS12O14924 1447 aa13.13□□□□□ -0.31
POLR1B-210ENST00000458012 TECPR2O15040 1411 aa13.13□□□□□ -0.31
POLR1B-210ENST00000458012 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
POLR1B-210ENST00000458012 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
POLR1B-210ENST00000458012 C14orf93Q9H972 538 aaKnown RBP13.12□□□□□ -0.31
POLR1B-210ENST00000458012 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
POLR1B-210ENST00000458012 PIK3C2GO75747 1445 aa13.12□□□□□ -0.31
POLR1B-210ENST00000458012 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
POLR1B-210ENST00000458012 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
POLR1B-210ENST00000458012 PSME1Q06323 249 aa13.11□□□□□ -0.31
POLR1B-210ENST00000458012 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-210ENST00000458012 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
POLR1B-210ENST00000458012 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
POLR1B-210ENST00000458012 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
POLR1B-210ENST00000458012 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
POLR1B-210ENST00000458012 PXDNQ92626 1479 aa13.1□□□□□ -0.31
POLR1B-210ENST00000458012 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
POLR1B-210ENST00000458012 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
POLR1B-210ENST00000458012 MYOM2P54296 1465 aa13.09□□□□□ -0.31
POLR1B-210ENST00000458012 ATRNO75882 1429 aa13.08□□□□□ -0.32
POLR1B-210ENST00000458012 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
POLR1B-210ENST00000458012 POGKQ9P215 609 aa13.08□□□□□ -0.32
POLR1B-210ENST00000458012 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
POLR1B-210ENST00000458012 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
POLR1B-210ENST00000458012 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
POLR1B-210ENST00000458012 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
POLR1B-210ENST00000458012 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
POLR1B-210ENST00000458012 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
POLR1B-210ENST00000458012 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
POLR1B-210ENST00000458012 DSG3P32926 999 aa13.06□□□□□ -0.32
POLR1B-210ENST00000458012 UNC5CLQ8IV45 518 aa13.06□□□□□ -0.32
POLR1B-210ENST00000458012 PRAM1Q96QH2 718 aa13.06□□□□□ -0.32
POLR1B-210ENST00000458012 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
POLR1B-210ENST00000458012 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
POLR1B-210ENST00000458012 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
POLR1B-210ENST00000458012 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
POLR1B-210ENST00000458012 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
POLR1B-210ENST00000458012 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
POLR1B-210ENST00000458012 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
POLR1B-210ENST00000458012 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
POLR1B-210ENST00000458012 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
POLR1B-210ENST00000458012 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
POLR1B-210ENST00000458012 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
POLR1B-210ENST00000458012 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
POLR1B-210ENST00000458012 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
POLR1B-210ENST00000458012 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
POLR1B-210ENST00000458012 SLIT2O94813 1529 aa13□□□□□ -0.33
POLR1B-210ENST00000458012 DLC1Q96QB1 1528 aa13□□□□□ -0.33
POLR1B-210ENST00000458012 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
POLR1B-210ENST00000458012 ANKARQ7Z5J8 1434 aa12.99□□□□□ -0.33
POLR1B-210ENST00000458012 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
POLR1B-210ENST00000458012 SF3B2Q13435 895 aaKnown RBP12.99□□□□□ -0.33
POLR1B-210ENST00000458012 VPS72Q15906 364 aa12.99□□□□□ -0.33
POLR1B-210ENST00000458012 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
POLR1B-210ENST00000458012 RALGAPBQ86X10 1494 aa12.98□□□□□ -0.33
POLR1B-210ENST00000458012 HRCP23327 699 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms