RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
MSC-AS1-201ENST00000457356 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
MSC-AS1-201ENST00000457356 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
MSC-AS1-201ENST00000457356 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
MSC-AS1-201ENST00000457356 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
MSC-AS1-201ENST00000457356 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
MSC-AS1-201ENST00000457356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 PTMSP20962 102 aa12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 ATP10AO60312 1499 aa12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
MSC-AS1-201ENST00000457356 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 KIAA1211Q6ZU35 1233 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 PRDM11Q9NQV5 511 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 NEO1Q92859 1461 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 FOXO3O43524 673 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
MSC-AS1-201ENST00000457356 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
MSC-AS1-201ENST00000457356 SF3B2Q13435 895 aaKnown RBP12.09□□□□□ -0.47
MSC-AS1-201ENST00000457356 PANK3Q9H999 370 aa12.09□□□□□ -0.47
MSC-AS1-201ENST00000457356 USP47Q96K76 1375 aa12.09□□□□□ -0.47
MSC-AS1-201ENST00000457356 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
MSC-AS1-201ENST00000457356 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
MSC-AS1-201ENST00000457356 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
MSC-AS1-201ENST00000457356 CDK19Q9BWU1 502 aa12.08□□□□□ -0.48
MSC-AS1-201ENST00000457356 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
MSC-AS1-201ENST00000457356 NAIPQ13075 1403 aa12.07□□□□□ -0.48
MSC-AS1-201ENST00000457356 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
MSC-AS1-201ENST00000457356 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
MSC-AS1-201ENST00000457356 CNTLNQ9NXG0 1405 aa12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 RAPGEF4Q8WZA2 1011 aa12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 MSH6P52701 1360 aa12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 LMTK3Q96Q04 1460 aa12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 ELL2O00472 640 aaPredicted RBP12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
MSC-AS1-201ENST00000457356 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
MSC-AS1-201ENST00000457356 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
MSC-AS1-201ENST00000457356 C1orf141Q5JVX7 400 aa12.04□□□□□ -0.48
MSC-AS1-201ENST00000457356 APAF1O14727 1248 aa12.03□□□□□ -0.48
MSC-AS1-201ENST00000457356 CCDC184Q52MB2 194 aa12.03□□□□□ -0.48
MSC-AS1-201ENST00000457356 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
MSC-AS1-201ENST00000457356 TOM1L2Q6ZVM7 507 aa12.03□□□□□ -0.48
MSC-AS1-201ENST00000457356 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
MSC-AS1-201ENST00000457356 SLC4A10Q6U841 1118 aa12.02□□□□□ -0.48
MSC-AS1-201ENST00000457356 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.48
MSC-AS1-201ENST00000457356 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.49
MSC-AS1-201ENST00000457356 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
MSC-AS1-201ENST00000457356 ST18O60284 1047 aa12.02□□□□□ -0.49
MSC-AS1-201ENST00000457356 ZNF771Q7L3S4 317 aaPredicted RBP12.02□□□□□ -0.49
MSC-AS1-201ENST00000457356 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 ZFYVE16Q7Z3T8 1539 aa12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
MSC-AS1-201ENST00000457356 SKOR2Q2VWA4 1001 aaPredicted RBP12□□□□□ -0.49
MSC-AS1-201ENST00000457356 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
MSC-AS1-201ENST00000457356 SLC12A5Q9H2X9 1139 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
MSC-AS1-201ENST00000457356 TEFQ10587 303 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 GNL2Q13823 731 aaKnown RBP12□□□□□ -0.49
MSC-AS1-201ENST00000457356 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 ZNF592Q92610 1267 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 KDM6BO15054 1643 aa12□□□□□ -0.49
MSC-AS1-201ENST00000457356 ABCA8O94911 1581 aa11.99□□□□□ -0.49
MSC-AS1-201ENST00000457356 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
MSC-AS1-201ENST00000457356 NOS1P29475 1434 aa11.98□□□□□ -0.49
MSC-AS1-201ENST00000457356 RBM10P98175 930 aaKnown RBP11.98□□□□□ -0.49
MSC-AS1-201ENST00000457356 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 KCNA6P17658 529 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 CCAR2Q8N163 923 aaKnown RBP11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 SAMD9Q5K651 1589 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 RNF214Q8ND24 703 aa11.97□□□□□ -0.49
MSC-AS1-201ENST00000457356 CREBRFQ8IUR6 639 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms