RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-214ENST00000457270 ZSCAN30Q86W11 494 aa17.75■□□□□ 0.43
TOP3B-214ENST00000457270 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
TOP3B-214ENST00000457270 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
TOP3B-214ENST00000457270 RLBP1P12271 317 aa17.74■□□□□ 0.43
TOP3B-214ENST00000457270 MADDQ8WXG6 1647 aa17.74■□□□□ 0.43
TOP3B-214ENST00000457270 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-214ENST00000457270 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
TOP3B-214ENST00000457270 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
TOP3B-214ENST00000457270 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
TOP3B-214ENST00000457270 RAB3GAP1Q15042 981 aa17.72■□□□□ 0.43
TOP3B-214ENST00000457270 IBTKQ9P2D0 1353 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-214ENST00000457270 ABCA8O94911 1581 aa17.72■□□□□ 0.43
TOP3B-214ENST00000457270 FAM13BQ9NYF5 915 aa17.72■□□□□ 0.43
TOP3B-214ENST00000457270 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.43
TOP3B-214ENST00000457270 SCAF11Q99590 1463 aaKnown RBP17.71■□□□□ 0.43
TOP3B-214ENST00000457270 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
TOP3B-214ENST00000457270 PLEKHD1A6NEE1 506 aa17.71■□□□□ 0.43
TOP3B-214ENST00000457270 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.43
TOP3B-214ENST00000457270 RSPH4AQ5TD94 716 aa17.71■□□□□ 0.43
TOP3B-214ENST00000457270 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-214ENST00000457270 KDM5AP29375 1690 aaKnown RBP17.7■□□□□ 0.42
TOP3B-214ENST00000457270 KANK1Q14678 1352 aa17.69■□□□□ 0.42
TOP3B-214ENST00000457270 RIPK4P57078 832 aa17.69■□□□□ 0.42
TOP3B-214ENST00000457270 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
TOP3B-214ENST00000457270 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
TOP3B-214ENST00000457270 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
TOP3B-214ENST00000457270 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
TOP3B-214ENST00000457270 ZHX1Q9UKY1 873 aaPredicted RBP17.68■□□□□ 0.42
TOP3B-214ENST00000457270 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
TOP3B-214ENST00000457270 HS1BP3Q53T59 392 aa17.68■□□□□ 0.42
TOP3B-214ENST00000457270 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-214ENST00000457270 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
TOP3B-214ENST00000457270 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-214ENST00000457270 TNNQ9UQP3 1299 aa17.67■□□□□ 0.42
TOP3B-214ENST00000457270 CEP152O94986 1710 aa17.67■□□□□ 0.42
TOP3B-214ENST00000457270 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-214ENST00000457270 DUOX2Q9NRD8 1548 aa17.66■□□□□ 0.42
TOP3B-214ENST00000457270 SHPRHQ149N8 1683 aa17.66■□□□□ 0.42
TOP3B-214ENST00000457270 MSNP26038 577 aaKnown RBP17.66■□□□□ 0.42
TOP3B-214ENST00000457270 ANP32BQ92688 251 aaKnown RBP17.66■□□□□ 0.42
TOP3B-214ENST00000457270 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
TOP3B-214ENST00000457270 CLEC17AQ6ZS10 378 aa17.66■□□□□ 0.42
TOP3B-214ENST00000457270 ARID3AQ99856 593 aa17.66■□□□□ 0.42
TOP3B-214ENST00000457270 ARHGAP31Q2M1Z3 1444 aa17.65■□□□□ 0.42
TOP3B-214ENST00000457270 BBXQ8WY36 941 aaPredicted RBP17.65■□□□□ 0.42
TOP3B-214ENST00000457270 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.42
TOP3B-214ENST00000457270 ATP10BO94823 1461 aa17.64■□□□□ 0.41
TOP3B-214ENST00000457270 PREX2Q70Z35 1606 aa17.64■□□□□ 0.41
TOP3B-214ENST00000457270 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
TOP3B-214ENST00000457270 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
TOP3B-214ENST00000457270 MTERF4Q7Z6M4 381 aaKnown RBP17.63■□□□□ 0.41
TOP3B-214ENST00000457270 RUNDC1Q96C34 613 aa17.63■□□□□ 0.41
TOP3B-214ENST00000457270 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
TOP3B-214ENST00000457270 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
TOP3B-214ENST00000457270 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
TOP3B-214ENST00000457270 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
TOP3B-214ENST00000457270 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
TOP3B-214ENST00000457270 ZNF500O60304 480 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-214ENST00000457270 KLHL40Q2TBA0 621 aa17.62■□□□□ 0.41
TOP3B-214ENST00000457270 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
TOP3B-214ENST00000457270 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
TOP3B-214ENST00000457270 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
TOP3B-214ENST00000457270 GOLGA6L22H0YM25 854 aa17.6■□□□□ 0.41
TOP3B-214ENST00000457270 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
TOP3B-214ENST00000457270 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
TOP3B-214ENST00000457270 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
TOP3B-214ENST00000457270 R3HCC1Q9Y3T6 440 aaKnown RBP17.6■□□□□ 0.41
TOP3B-214ENST00000457270 ZNF445P59923 1031 aa17.59■□□□□ 0.41
TOP3B-214ENST00000457270 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.41
TOP3B-214ENST00000457270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.415e-7■□□□□ 9.8
TOP3B-214ENST00000457270 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.41
TOP3B-214ENST00000457270 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
TOP3B-214ENST00000457270 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
TOP3B-214ENST00000457270 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
TOP3B-214ENST00000457270 ERVK-7P63135 1459 aa17.57■□□□□ 0.4
TOP3B-214ENST00000457270 PDLIM2Q96JY6 352 aa17.57■□□□□ 0.4
TOP3B-214ENST00000457270 KIF2CQ99661 725 aa17.57■□□□□ 0.4
TOP3B-214ENST00000457270 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
TOP3B-214ENST00000457270 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
TOP3B-214ENST00000457270 DYNC1I1O14576 645 aa17.56■□□□□ 0.4
TOP3B-214ENST00000457270 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
TOP3B-214ENST00000457270 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-214ENST00000457270 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
TOP3B-214ENST00000457270 MCM5P33992 734 aa17.55■□□□□ 0.4
TOP3B-214ENST00000457270 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
TOP3B-214ENST00000457270 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
TOP3B-214ENST00000457270 UQCRHLA0A096LP55 91 aa17.54■□□□□ 0.4
TOP3B-214ENST00000457270 UQCRHP07919 91 aa17.54■□□□□ 0.4
TOP3B-214ENST00000457270 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-214ENST00000457270 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
TOP3B-214ENST00000457270 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
TOP3B-214ENST00000457270 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.54■□□□□ 0.4
TOP3B-214ENST00000457270 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
TOP3B-214ENST00000457270 TRPM2O94759 1503 aa17.53■□□□□ 0.4
TOP3B-214ENST00000457270 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
TOP3B-214ENST00000457270 SSFA2P28290 1259 aa17.53■□□□□ 0.4
TOP3B-214ENST00000457270 NUCB1Q02818 461 aa17.53■□□□□ 0.4
TOP3B-214ENST00000457270 DMTNQ08495 405 aa17.53■□□□□ 0.4
TOP3B-214ENST00000457270 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms