RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 FBXO41Q8TF61 875 aa20.19■□□□□ 0.82
SMPD4-215ENST00000457039 TOM1O60784 492 aa20.18■□□□□ 0.82
SMPD4-215ENST00000457039 CADPS2Q86UW7 1296 aa20.16■□□□□ 0.82
SMPD4-215ENST00000457039 CDC42BPGQ6DT37 1551 aa20.16■□□□□ 0.82
SMPD4-215ENST00000457039 POGKQ9P215 609 aa20.15■□□□□ 0.82
SMPD4-215ENST00000457039 ATF3P18847 181 aa20.14■□□□□ 0.81
SMPD4-215ENST00000457039 ADGRB2O60241 1585 aa20.13■□□□□ 0.81
SMPD4-215ENST00000457039 MST1RQ04912 1400 aa20.13■□□□□ 0.81
SMPD4-215ENST00000457039 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMPD4-215ENST00000457039 CARD11Q9BXL7 1154 aa20.12■□□□□ 0.81
SMPD4-215ENST00000457039 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
SMPD4-215ENST00000457039 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
SMPD4-215ENST00000457039 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.81
SMPD4-215ENST00000457039 PIP4K2BP78356 416 aa20.08■□□□□ 0.81
SMPD4-215ENST00000457039 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.8
SMPD4-215ENST00000457039 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
SMPD4-215ENST00000457039 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-215ENST00000457039 ILDR1Q86SU0 546 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-215ENST00000457039 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-215ENST00000457039 QRICH2Q9H0J4 1663 aa20.06■□□□□ 0.8
SMPD4-215ENST00000457039 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
SMPD4-215ENST00000457039 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
SMPD4-215ENST00000457039 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-215ENST00000457039 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
SMPD4-215ENST00000457039 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
SMPD4-215ENST00000457039 USP47Q96K76 1375 aa20.01■□□□□ 0.79
SMPD4-215ENST00000457039 USP32Q8NFA0 1604 aa20.01■□□□□ 0.79
SMPD4-215ENST00000457039 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
SMPD4-215ENST00000457039 ANKARQ7Z5J8 1434 aa20.01■□□□□ 0.79
SMPD4-215ENST00000457039 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
SMPD4-215ENST00000457039 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
SMPD4-215ENST00000457039 PRR36Q9H6K5 1346 aa19.99■□□□□ 0.79
SMPD4-215ENST00000457039 CDK19Q9BWU1 502 aa19.98■□□□□ 0.79
SMPD4-215ENST00000457039 ATP7BP35670 1465 aa19.98■□□□□ 0.79
SMPD4-215ENST00000457039 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
SMPD4-215ENST00000457039 TESK2Q96S53 571 aa19.97■□□□□ 0.79
SMPD4-215ENST00000457039 AHDC1Q5TGY3 1603 aaPredicted RBP19.97■□□□□ 0.79
SMPD4-215ENST00000457039 HSPA1LP34931 641 aa19.96■□□□□ 0.79
SMPD4-215ENST00000457039 RGPD8O14715 1765 aaPredicted RBP19.95■□□□□ 0.78
SMPD4-215ENST00000457039 NHSL1Q5SYE7 1610 aa19.95■□□□□ 0.78
SMPD4-215ENST00000457039 ESCO1Q5FWF5 840 aa19.95■□□□□ 0.78
SMPD4-215ENST00000457039 EVC2Q86UK5 1308 aa19.94■□□□□ 0.78
SMPD4-215ENST00000457039 NUDT16Q96DE0 195 aaKnown RBP19.93■□□□□ 0.78
SMPD4-215ENST00000457039 KIF1AQ12756 1690 aa19.93■□□□□ 0.78
SMPD4-215ENST00000457039 TOPAZ1Q8N9V7 1692 aa19.92■□□□□ 0.78
SMPD4-215ENST00000457039 CABP2Q9NPB3 220 aa19.92■□□□□ 0.78
SMPD4-215ENST00000457039 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
SMPD4-215ENST00000457039 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
SMPD4-215ENST00000457039 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
SMPD4-215ENST00000457039 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
SMPD4-215ENST00000457039 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
SMPD4-215ENST00000457039 ITSN1Q15811 1721 aa19.9■□□□□ 0.78
SMPD4-215ENST00000457039 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMPD4-215ENST00000457039 CCDC61Q9Y6R9 512 aa19.89■□□□□ 0.77
SMPD4-215ENST00000457039 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
SMPD4-215ENST00000457039 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
SMPD4-215ENST00000457039 PXDNQ92626 1479 aa19.87■□□□□ 0.77
SMPD4-215ENST00000457039 NPHP3Q7Z494 1330 aa19.87■□□□□ 0.77
SMPD4-215ENST00000457039 FOXO3O43524 673 aa19.87■□□□□ 0.77
SMPD4-215ENST00000457039 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
SMPD4-215ENST00000457039 PLEKHG3A1L390 1219 aa19.86■□□□□ 0.77
SMPD4-215ENST00000457039 PMFBP1Q8TBY8 1022 aa19.86■□□□□ 0.77
SMPD4-215ENST00000457039 PUS7Q96PZ0 661 aaKnown RBP19.86■□□□□ 0.77
SMPD4-215ENST00000457039 PPIP5K1Q6PFW1 1433 aa19.85■□□□□ 0.77
SMPD4-215ENST00000457039 ATAD2Q6PL18 1390 aa19.85■□□□□ 0.77
SMPD4-215ENST00000457039 DISP3Q9P2K9 1392 aa19.85■□□□□ 0.77
SMPD4-215ENST00000457039 POLR3AO14802 1390 aaPredicted RBP19.84■□□□□ 0.77
SMPD4-215ENST00000457039 TMF1P82094 1093 aa19.83■□□□□ 0.77
SMPD4-215ENST00000457039 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
SMPD4-215ENST00000457039 CABP1Q9NZU7 370 aa19.81■□□□□ 0.76
SMPD4-215ENST00000457039 ACEP12821 1306 aa19.8■□□□□ 0.76
SMPD4-215ENST00000457039 KRT28Q7Z3Y7 464 aa19.8■□□□□ 0.76
SMPD4-215ENST00000457039 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
SMPD4-215ENST00000457039 LRRC59Q96AG4 307 aaKnown RBP19.8■□□□□ 0.76
SMPD4-215ENST00000457039 JCADQ9P266 1359 aa19.8■□□□□ 0.76
SMPD4-215ENST00000457039 TRPM3Q9HCF6 1732 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-215ENST00000457039 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-215ENST00000457039 PSME1Q06323 249 aa19.78■□□□□ 0.76
SMPD4-215ENST00000457039 SBNO1A3KN83 1393 aa19.78■□□□□ 0.76
SMPD4-215ENST00000457039 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
SMPD4-215ENST00000457039 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
SMPD4-215ENST00000457039 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
SMPD4-215ENST00000457039 CD163L1Q9NR16 1453 aa19.76■□□□□ 0.75
SMPD4-215ENST00000457039 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
SMPD4-215ENST00000457039 CPSF1Q10570 1443 aaKnown RBP19.76■□□□□ 0.75
SMPD4-215ENST00000457039 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
SMPD4-215ENST00000457039 NINLQ9Y2I6 1382 aa19.75■□□□□ 0.75
SMPD4-215ENST00000457039 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-215ENST00000457039 SLC12A5Q9H2X9 1139 aa19.74■□□□□ 0.75
SMPD4-215ENST00000457039 AKAP12Q02952 1782 aa19.74■□□□□ 0.75
SMPD4-215ENST00000457039 SSH2Q76I76 1423 aa19.74■□□□□ 0.75
SMPD4-215ENST00000457039 ALS2Q96Q42 1657 aa19.73■□□□□ 0.75
SMPD4-215ENST00000457039 USP6P35125 1406 aa19.73■□□□□ 0.75
SMPD4-215ENST00000457039 C11orf95C9JLR9 678 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-215ENST00000457039 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SMPD4-215ENST00000457039 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
SMPD4-215ENST00000457039 ZNF692Q9BU19 519 aaPredicted RBP19.71■□□□□ 0.75
SMPD4-215ENST00000457039 MYOM1P52179 1685 aa19.71■□□□□ 0.75
SMPD4-215ENST00000457039 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
SMPD4-215ENST00000457039 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 917.7 ms