RNA–Protein interactions for RNA: ENST00000456774.5

PLXNB1-204, Transcript of plexin B1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PLXNB1, Length 5,859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-204ENST00000456774 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
PLXNB1-204ENST00000456774 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
PLXNB1-204ENST00000456774 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
PLXNB1-204ENST00000456774 ERC2O15083 957 aa17.5■□□□□ 0.39
PLXNB1-204ENST00000456774 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 TXNDC2Q86VQ3 553 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 ARID3AQ99856 593 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 KIAA1107Q9UPP5 1409 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 CPLX1O14810 134 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 TRDNQ13061 729 aa17.49■□□□□ 0.39
PLXNB1-204ENST00000456774 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
PLXNB1-204ENST00000456774 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
PLXNB1-204ENST00000456774 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
PLXNB1-204ENST00000456774 MAP7D2Q96T17 732 aa17.48■□□□□ 0.39
PLXNB1-204ENST00000456774 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
PLXNB1-204ENST00000456774 RAD21O60216 631 aa17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 BECN2A8MW95 431 aa17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 TCP11L2Q8N4U5 519 aa17.47■□□□□ 0.39
PLXNB1-204ENST00000456774 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
PLXNB1-204ENST00000456774 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
PLXNB1-204ENST00000456774 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
PLXNB1-204ENST00000456774 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
PLXNB1-204ENST00000456774 FBXW7Q969H0 707 aa17.46■□□□□ 0.39
PLXNB1-204ENST00000456774 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.38
PLXNB1-204ENST00000456774 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
PLXNB1-204ENST00000456774 TPM2P07951 284 aa17.45■□□□□ 0.38
PLXNB1-204ENST00000456774 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
PLXNB1-204ENST00000456774 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
PLXNB1-204ENST00000456774 PDE4CQ08493 712 aa17.44■□□□□ 0.38
PLXNB1-204ENST00000456774 TSR1Q2NL82 804 aaKnown RBP17.44■□□□□ 0.38
PLXNB1-204ENST00000456774 NEUROD6Q96NK8 337 aa17.44■□□□□ 0.38
PLXNB1-204ENST00000456774 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
PLXNB1-204ENST00000456774 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
PLXNB1-204ENST00000456774 ERICH2A1L162 156 aa17.43■□□□□ 0.38
PLXNB1-204ENST00000456774 SETQ01105 290 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-204ENST00000456774 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-204ENST00000456774 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
PLXNB1-204ENST00000456774 CTDP1Q9Y5B0 961 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-204ENST00000456774 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 CDC45O75419 566 aa17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 TPM1P09493 284 aa17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
PLXNB1-204ENST00000456774 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 C22orf23Q9BZE7 217 aa17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 DAPK1P53355 1430 aa17.41■□□□□ 0.38
PLXNB1-204ENST00000456774 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
PLXNB1-204ENST00000456774 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
PLXNB1-204ENST00000456774 GNAI3P08754 354 aa17.4■□□□□ 0.38
PLXNB1-204ENST00000456774 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
PLXNB1-204ENST00000456774 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.38
PLXNB1-204ENST00000456774 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
PLXNB1-204ENST00000456774 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.37
PLXNB1-204ENST00000456774 THEMISQ8N1K5 641 aaPredicted RBP17.39■□□□□ 0.37
PLXNB1-204ENST00000456774 CCDC47Q96A33 483 aaKnown RBP17.39■□□□□ 0.37
PLXNB1-204ENST00000456774 GPS2Q13227 327 aa17.39■□□□□ 0.37
PLXNB1-204ENST00000456774 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
PLXNB1-204ENST00000456774 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
PLXNB1-204ENST00000456774 SLC52A1Q9NWF4 448 aa17.38■□□□□ 0.37
PLXNB1-204ENST00000456774 NUCB2P80303 420 aa17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 RALYLQ86SE5 291 aaKnown RBP17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
PLXNB1-204ENST00000456774 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 FOSBP53539 338 aa17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 FSD1Q9BTV5 496 aa17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 SURF6O75683 361 aaKnown RBP17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
PLXNB1-204ENST00000456774 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 ANKRD20A12PQ8NF67 263 aa17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 PCMTD1Q96MG8 357 aaPredicted RBP17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
PLXNB1-204ENST00000456774 FYB1O15117 783 aa17.33■□□□□ 0.37
PLXNB1-204ENST00000456774 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms