RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
LINC00959-201ENST00000456581 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
LINC00959-201ENST00000456581 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
LINC00959-201ENST00000456581 SETBP1Q9Y6X0 1596 aa16.37■□□□□ 0.21
LINC00959-201ENST00000456581 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
LINC00959-201ENST00000456581 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
LINC00959-201ENST00000456581 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
LINC00959-201ENST00000456581 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
LINC00959-201ENST00000456581 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
LINC00959-201ENST00000456581 CLTCQ00610 1675 aaKnown RBP16.35■□□□□ 0.21
LINC00959-201ENST00000456581 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
LINC00959-201ENST00000456581 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
LINC00959-201ENST00000456581 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.21
LINC00959-201ENST00000456581 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
LINC00959-201ENST00000456581 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.2
LINC00959-201ENST00000456581 BACH2Q9BYV9 841 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 NEFMP07197 916 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00959-201ENST00000456581 PRAM1Q96QH2 718 aa16.31■□□□□ 0.2
LINC00959-201ENST00000456581 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
LINC00959-201ENST00000456581 ARHGEF28Q8N1W1 1705 aaKnown RBP16.3■□□□□ 0.2
LINC00959-201ENST00000456581 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
LINC00959-201ENST00000456581 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
LINC00959-201ENST00000456581 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 AGLP35573 1532 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
LINC00959-201ENST00000456581 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
LINC00959-201ENST00000456581 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
LINC00959-201ENST00000456581 ESF1Q9H501 851 aaKnown RBP16.27■□□□□ 0.2
LINC00959-201ENST00000456581 POGKQ9P215 609 aa16.27■□□□□ 0.2
LINC00959-201ENST00000456581 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
LINC00959-201ENST00000456581 ZFYVE9O95405 1425 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 PDE3BQ13370 1112 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 WAPLQ7Z5K2 1190 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
LINC00959-201ENST00000456581 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
LINC00959-201ENST00000456581 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
LINC00959-201ENST00000456581 YTHDC2Q9H6S0 1430 aaKnown RBP16.25■□□□□ 0.19
LINC00959-201ENST00000456581 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
LINC00959-201ENST00000456581 APAF1O14727 1248 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 PTPRMP28827 1452 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
LINC00959-201ENST00000456581 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
LINC00959-201ENST00000456581 ADAMTSL3P82987 1691 aa16.21■□□□□ 0.19
LINC00959-201ENST00000456581 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
LINC00959-201ENST00000456581 MTHFSP49914 203 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 RGS3P49796 1198 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
LINC00959-201ENST00000456581 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
LINC00959-201ENST00000456581 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 MS4A1P11836 297 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 METP08581 1390 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
LINC00959-201ENST00000456581 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
LINC00959-201ENST00000456581 INSRP06213 1382 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 BCAR3O75815 825 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 FBLN1P23142 703 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
LINC00959-201ENST00000456581 TNRQ92752 1358 aa16.14■□□□□ 0.17
LINC00959-201ENST00000456581 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
LINC00959-201ENST00000456581 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
LINC00959-201ENST00000456581 FYB1O15117 783 aa16.13■□□□□ 0.17
LINC00959-201ENST00000456581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.176e-7■■■■□ 23.8
LINC00959-201ENST00000456581 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
LINC00959-201ENST00000456581 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
LINC00959-201ENST00000456581 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
LINC00959-201ENST00000456581 LTKP29376 864 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 SETD1AO15047 1707 aaKnown RBP16.1■□□□□ 0.17
LINC00959-201ENST00000456581 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
LINC00959-201ENST00000456581 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.16
LINC00959-201ENST00000456581 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
LINC00959-201ENST00000456581 TMEM2Q9UHN6 1383 aa16.07■□□□□ 0.16
LINC00959-201ENST00000456581 IGHDP01880 384 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms