RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CRBNQ96SW2 442 aa24.18■■□□□ 1.46
SEMA3B-209ENST00000456560 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
SEMA3B-209ENST00000456560 APAF1O14727 1248 aa24.16■■□□□ 1.46
SEMA3B-209ENST00000456560 ARHGEF40Q8TER5 1519 aa24.16■■□□□ 1.46
SEMA3B-209ENST00000456560 NGEFQ8N5V2 710 aa24.16■■□□□ 1.46
SEMA3B-209ENST00000456560 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
SEMA3B-209ENST00000456560 PREX1Q8TCU6 1659 aa24.15■■□□□ 1.46
SEMA3B-209ENST00000456560 MORC1Q86VD1 984 aa24.14■■□□□ 1.45
SEMA3B-209ENST00000456560 EVC2Q86UK5 1308 aa24.14■■□□□ 1.45
SEMA3B-209ENST00000456560 TMEM131LA2VDJ0 1609 aa24.13■■□□□ 1.45
SEMA3B-209ENST00000456560 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
SEMA3B-209ENST00000456560 C20orf194Q5TEA3 1177 aa24.12■■□□□ 1.45
SEMA3B-209ENST00000456560 SHPRHQ149N8 1683 aa24.12■■□□□ 1.45
SEMA3B-209ENST00000456560 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
SEMA3B-209ENST00000456560 SPINK5Q9NQ38 1064 aaPredicted RBP24.11■■□□□ 1.45
SEMA3B-209ENST00000456560 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
SEMA3B-209ENST00000456560 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.45
SEMA3B-209ENST00000456560 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-209ENST00000456560 E9PSI1 815 aa24.07■■□□□ 1.44
SEMA3B-209ENST00000456560 NOP58Q9Y2X3 529 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-209ENST00000456560 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
SEMA3B-209ENST00000456560 MS4A1P11836 297 aa24.05■■□□□ 1.44
SEMA3B-209ENST00000456560 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.05■■□□□ 1.44
SEMA3B-209ENST00000456560 NSD2O96028 1365 aa24.05■■□□□ 1.44
SEMA3B-209ENST00000456560 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
SEMA3B-209ENST00000456560 AGLP35573 1532 aa24.04■■□□□ 1.44
SEMA3B-209ENST00000456560 CABP2Q9NPB3 220 aa24.03■■□□□ 1.44
SEMA3B-209ENST00000456560 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
SEMA3B-209ENST00000456560 PTPRMP28827 1452 aa24.02■■□□□ 1.44
SEMA3B-209ENST00000456560 FBXO31Q5XUX0 539 aaPredicted RBP24.02■■□□□ 1.44
SEMA3B-209ENST00000456560 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
SEMA3B-209ENST00000456560 KDM2BQ8NHM5 1336 aa24.01■■□□□ 1.43
SEMA3B-209ENST00000456560 NINLQ9Y2I6 1382 aa24.01■■□□□ 1.43
SEMA3B-209ENST00000456560 MTHFSP49914 203 aa24■■□□□ 1.43
SEMA3B-209ENST00000456560 RUNDC1Q96C34 613 aa24■■□□□ 1.43
SEMA3B-209ENST00000456560 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
SEMA3B-209ENST00000456560 STK26Q9P289 416 aa23.99■■□□□ 1.43
SEMA3B-209ENST00000456560 PDE4AP27815 886 aa23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 DEKP35659 375 aaKnown RBP23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 ANP32AP39687 249 aaKnown RBP23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-209ENST00000456560 CFAP53Q96M91 514 aa23.97■■□□□ 1.43
SEMA3B-209ENST00000456560 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 CLTCQ00610 1675 aaKnown RBP23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 BACH2Q9BYV9 841 aa23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 ABCC11Q96J66 1382 aa23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 IPO9Q96P70 1041 aaKnown RBP23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
SEMA3B-209ENST00000456560 A0A1W2PP64 1363 aa23.95■■□□□ 1.43
SEMA3B-209ENST00000456560 BCAR3O75815 825 aa23.95■■□□□ 1.42
SEMA3B-209ENST00000456560 CENPQQ7L2Z9 268 aaPredicted RBP23.94■■□□□ 1.42
SEMA3B-209ENST00000456560 TCP11L2Q8N4U5 519 aa23.94■■□□□ 1.42
SEMA3B-209ENST00000456560 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
SEMA3B-209ENST00000456560 SRPK2P78362 688 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-209ENST00000456560 NCBP3Q53F19 620 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-209ENST00000456560 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
SEMA3B-209ENST00000456560 NBR1Q14596 966 aa23.92■■□□□ 1.42
SEMA3B-209ENST00000456560 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-209ENST00000456560 ESF1Q9H501 851 aaKnown RBP23.91■■□□□ 1.42
SEMA3B-209ENST00000456560 CCDC27Q2M243 656 aa23.91■■□□□ 1.42
SEMA3B-209ENST00000456560 CD163L1Q9NR16 1453 aa23.9■■□□□ 1.42
SEMA3B-209ENST00000456560 MINK1Q8N4C8 1332 aaPredicted RBP23.9■■□□□ 1.42
SEMA3B-209ENST00000456560 WDR63Q8IWG1 891 aa23.9■■□□□ 1.42
SEMA3B-209ENST00000456560 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
SEMA3B-209ENST00000456560 SPATA31D1Q6ZQQ2 1576 aa23.89■■□□□ 1.42
SEMA3B-209ENST00000456560 SKAP1Q86WV1 359 aa23.89■■□□□ 1.41
SEMA3B-209ENST00000456560 POGKQ9P215 609 aa23.89■■□□□ 1.41
SEMA3B-209ENST00000456560 MED14O60244 1454 aa23.89■■□□□ 1.41
SEMA3B-209ENST00000456560 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
SEMA3B-209ENST00000456560 TERF2IPQ9NYB0 399 aa23.87■■□□□ 1.41
SEMA3B-209ENST00000456560 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
SEMA3B-209ENST00000456560 PDE3AQ14432 1141 aa23.87■■□□□ 1.41
SEMA3B-209ENST00000456560 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
SEMA3B-209ENST00000456560 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
SEMA3B-209ENST00000456560 STAG3Q9UJ98 1225 aa23.86■■□□□ 1.41
SEMA3B-209ENST00000456560 NLRP1Q9C000 1473 aa23.86■■□□□ 1.41
SEMA3B-209ENST00000456560 ADGRB2O60241 1585 aa23.86■■□□□ 1.41
SEMA3B-209ENST00000456560 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
SEMA3B-209ENST00000456560 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
SEMA3B-209ENST00000456560 FYB1O15117 783 aa23.84■■□□□ 1.41
SEMA3B-209ENST00000456560 CDK19Q9BWU1 502 aa23.84■■□□□ 1.41
SEMA3B-209ENST00000456560 GGNBP2Q9H3C7 697 aa23.84■■□□□ 1.41
SEMA3B-209ENST00000456560 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.41
SEMA3B-209ENST00000456560 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.41
SEMA3B-209ENST00000456560 ZBTB47Q9UFB7 747 aaPredicted RBP23.83■■□□□ 1.41
SEMA3B-209ENST00000456560 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
SEMA3B-209ENST00000456560 SETD1AO15047 1707 aaKnown RBP23.82■■□□□ 1.4
SEMA3B-209ENST00000456560 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
SEMA3B-209ENST00000456560 CEBPAP49715 358 aaPredicted RBP23.81■■□□□ 1.4
SEMA3B-209ENST00000456560 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
SEMA3B-209ENST00000456560 HDGFL2Q7Z4V5 671 aaPredicted RBP23.79■■□□□ 1.4
SEMA3B-209ENST00000456560 PLEKHF1Q96S99 279 aa23.78■■□□□ 1.4
SEMA3B-209ENST00000456560 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
SEMA3B-209ENST00000456560 CABP1Q9NZU7 370 aa23.77■■□□□ 1.4
SEMA3B-209ENST00000456560 MYH16Q9H6N6 1097 aa23.76■■□□□ 1.39
SEMA3B-209ENST00000456560 PANK1Q8TE04 598 aa23.75■■□□□ 1.39
SEMA3B-209ENST00000456560 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms