RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 C8orf37Q96NL8 207 aa18.07■□□□□ 0.48
LMCD1-206ENST00000456506 MYOM2P54296 1465 aa18.07■□□□□ 0.48
LMCD1-206ENST00000456506 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
LMCD1-206ENST00000456506 EP400Q96L91 3159 aa18.05■□□□□ 0.48
LMCD1-206ENST00000456506 TECPR2O15040 1411 aa18.05■□□□□ 0.48
LMCD1-206ENST00000456506 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
LMCD1-206ENST00000456506 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
LMCD1-206ENST00000456506 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
LMCD1-206ENST00000456506 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
LMCD1-206ENST00000456506 ATRNO75882 1429 aa18.02■□□□□ 0.48
LMCD1-206ENST00000456506 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.47
LMCD1-206ENST00000456506 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
LMCD1-206ENST00000456506 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
LMCD1-206ENST00000456506 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
LMCD1-206ENST00000456506 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
LMCD1-206ENST00000456506 BCL9LQ86UU0 1499 aa18■□□□□ 0.47
LMCD1-206ENST00000456506 PIK3C2GO75747 1445 aa17.98■□□□□ 0.47
LMCD1-206ENST00000456506 FOXD1Q16676 465 aa17.98■□□□□ 0.47
LMCD1-206ENST00000456506 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
LMCD1-206ENST00000456506 GLI3P10071 1580 aa17.97■□□□□ 0.47
LMCD1-206ENST00000456506 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
LMCD1-206ENST00000456506 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
LMCD1-206ENST00000456506 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
LMCD1-206ENST00000456506 CCDC144AA2RUR9 1427 aa17.96■□□□□ 0.47
LMCD1-206ENST00000456506 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
LMCD1-206ENST00000456506 USP21Q9UK80 565 aa17.95■□□□□ 0.46
LMCD1-206ENST00000456506 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
LMCD1-206ENST00000456506 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
LMCD1-206ENST00000456506 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
LMCD1-206ENST00000456506 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
LMCD1-206ENST00000456506 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
LMCD1-206ENST00000456506 ANKRD30BQ9BXX2 1392 aa17.93■□□□□ 0.46
LMCD1-206ENST00000456506 TRPC5Q9UL62 973 aaPredicted RBP17.93■□□□□ 0.46
LMCD1-206ENST00000456506 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
LMCD1-206ENST00000456506 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
LMCD1-206ENST00000456506 WAPLQ7Z5K2 1190 aa17.92■□□□□ 0.46
LMCD1-206ENST00000456506 SLIT2O94813 1529 aa17.92■□□□□ 0.46
LMCD1-206ENST00000456506 TRPM3Q9HCF6 1732 aaPredicted RBP17.91■□□□□ 0.46
LMCD1-206ENST00000456506 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
LMCD1-206ENST00000456506 FOXO3O43524 673 aa17.9■□□□□ 0.46
LMCD1-206ENST00000456506 NRAPQ86VF7 1730 aa17.89■□□□□ 0.46
LMCD1-206ENST00000456506 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.46
LMCD1-206ENST00000456506 ADGRB2O60241 1585 aa17.89■□□□□ 0.45
LMCD1-206ENST00000456506 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
LMCD1-206ENST00000456506 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
LMCD1-206ENST00000456506 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
LMCD1-206ENST00000456506 ALS2Q96Q42 1657 aa17.87■□□□□ 0.45
LMCD1-206ENST00000456506 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
LMCD1-206ENST00000456506 STK26Q9P289 416 aa17.87■□□□□ 0.45
LMCD1-206ENST00000456506 SPATA31A3Q5VYP0 1347 aa17.86■□□□□ 0.45
LMCD1-206ENST00000456506 RALGAPBQ86X10 1494 aa17.86■□□□□ 0.45
LMCD1-206ENST00000456506 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
LMCD1-206ENST00000456506 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
LMCD1-206ENST00000456506 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
LMCD1-206ENST00000456506 DLC1Q96QB1 1528 aa17.85■□□□□ 0.45
LMCD1-206ENST00000456506 GJD4Q96KN9 370 aaPredicted RBP17.83■□□□□ 0.44
LMCD1-206ENST00000456506 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.44
LMCD1-206ENST00000456506 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
LMCD1-206ENST00000456506 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
LMCD1-206ENST00000456506 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
LMCD1-206ENST00000456506 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
LMCD1-206ENST00000456506 CFAP70Q5T0N1 1121 aa17.78■□□□□ 0.44
LMCD1-206ENST00000456506 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
LMCD1-206ENST00000456506 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
LMCD1-206ENST00000456506 COL14A1Q05707 1796 aaKnown RBP17.77■□□□□ 0.44
LMCD1-206ENST00000456506 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
LMCD1-206ENST00000456506 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
LMCD1-206ENST00000456506 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
LMCD1-206ENST00000456506 DHX57Q6P158 1386 aaKnown RBP17.76■□□□□ 0.43
LMCD1-206ENST00000456506 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
LMCD1-206ENST00000456506 LRP5O75197 1615 aa17.74■□□□□ 0.43
LMCD1-206ENST00000456506 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
LMCD1-206ENST00000456506 TULP4Q9NRJ4 1543 aa17.73■□□□□ 0.43
LMCD1-206ENST00000456506 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
LMCD1-206ENST00000456506 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
LMCD1-206ENST00000456506 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
LMCD1-206ENST00000456506 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
LMCD1-206ENST00000456506 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
LMCD1-206ENST00000456506 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
LMCD1-206ENST00000456506 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
LMCD1-206ENST00000456506 VPS72Q15906 364 aa17.72■□□□□ 0.43
LMCD1-206ENST00000456506 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
LMCD1-206ENST00000456506 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
LMCD1-206ENST00000456506 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
LMCD1-206ENST00000456506 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
LMCD1-206ENST00000456506 PSME1Q06323 249 aa17.69■□□□□ 0.42
LMCD1-206ENST00000456506 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
LMCD1-206ENST00000456506 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
LMCD1-206ENST00000456506 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
LMCD1-206ENST00000456506 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
LMCD1-206ENST00000456506 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
LMCD1-206ENST00000456506 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
LMCD1-206ENST00000456506 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
LMCD1-206ENST00000456506 ATP7BP35670 1465 aa17.65■□□□□ 0.42
LMCD1-206ENST00000456506 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
LMCD1-206ENST00000456506 POGKQ9P215 609 aa17.62■□□□□ 0.41
LMCD1-206ENST00000456506 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
LMCD1-206ENST00000456506 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
LMCD1-206ENST00000456506 KRT27Q7Z3Y8 459 aa17.61■□□□□ 0.41
LMCD1-206ENST00000456506 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms