RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 AK7Q96M32 723 aa11.52□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PARP9Q8IXQ6 854 aa11.51□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 MMP16P51512 607 aa11.5□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 RPIAP49247 311 aa11.49□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 GDF9O60383 454 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PRR20EP86478 221 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PRR20CP86479 221 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PRR20DP86480 221 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PRR20BP86481 221 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PRR20AP86496 221 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 TRAF7Q6Q0C0 670 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 PCDHGC3Q9UN70 934 aa11.48□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 FDX1P10109 184 aa11.47□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 MS4A1P11836 297 aa11.46□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 NDUFV2P19404 249 aa11.46□□□□□ -0.57
PCDH9-AS4-201ENST00000456459 MOXD2PA6NHM9 499 aa11.45□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 PKD2L1Q9P0L9 805 aa11.44□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 PDE4DQ08499 809 aa11.43□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 FOXC1Q12948 553 aa11.43□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 JUNDP17535 347 aa11.41□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 BCANQ96GW7 911 aa11.41□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
PCDH9-AS4-201ENST00000456459 TRIM32Q13049 653 aa11.38□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 PKDCCQ504Y2 493 aa11.38□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 DGAT1O75907 488 aa11.37□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 GJA5P36382 358 aa11.34□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 MYT1Q01538 1121 aa11.34□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 MTMR2Q13614 643 aa11.34□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
PCDH9-AS4-201ENST00000456459 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 TOR4AQ9NXH8 423 aa11.33□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 SPTLC1O15269 473 aa11.32□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 WNT7AO00755 349 aa11.31□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 SKOR1P84550 965 aa11.3□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 PTPRNQ16849 979 aa11.29□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 HRCP23327 699 aa11.28□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
PCDH9-AS4-201ENST00000456459 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 LIMD1Q9UGP4 676 aa11.27□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 CFAP99D6REC4 459 aa11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 WNT7BP56706 349 aa11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 AVPP01185 164 aa11.23□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 SMPD1P17405 629 aa11.22□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 QPCTQ16769 361 aa11.22□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 J3QL48 77 aa11.21□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
PCDH9-AS4-201ENST00000456459 SH3BP2P78314 561 aa11.2□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 POTECB2RU33 542 aa11.19□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 LILRB3O75022 631 aa11.19□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 BAP1Q92560 729 aa11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 POLR3EQ9NVU0 708 aa11.18□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 CTHP32929 405 aa11.17□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms