RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 WAPLQ7Z5K2 1190 aa30.24■■■□□ 2.43
YIPF3-204ENST00000455768 CDC42BPGQ6DT37 1551 aa30.24■■■□□ 2.43
YIPF3-204ENST00000455768 TECPR2O15040 1411 aa30.23■■■□□ 2.43
YIPF3-204ENST00000455768 PIK3C2GO75747 1445 aa30.22■■■□□ 2.43
YIPF3-204ENST00000455768 LRPPRCP42704 1394 aaKnown RBP30.22■■■□□ 2.43
YIPF3-204ENST00000455768 PLEKHH1Q9ULM0 1364 aa30.21■■■□□ 2.43
YIPF3-204ENST00000455768 ADAMTS2O95450 1211 aa30.21■■■□□ 2.43
YIPF3-204ENST00000455768 UPF1Q92900 1129 aaKnown RBP eCLIP30.2■■■□□ 2.43
YIPF3-204ENST00000455768 CDK12Q9NYV4 1490 aaPredicted RBP30.19■■■□□ 2.42
YIPF3-204ENST00000455768 ABCC11Q96J66 1382 aa30.18■■■□□ 2.42
YIPF3-204ENST00000455768 ESCO1Q5FWF5 840 aa30.18■■■□□ 2.42
YIPF3-204ENST00000455768 QTRT2Q9H974 415 aaKnown RBP30.16■■■□□ 2.42
YIPF3-204ENST00000455768 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
YIPF3-204ENST00000455768 PXDNQ92626 1479 aa30.14■■■□□ 2.42
YIPF3-204ENST00000455768 NGLY1Q96IV0 654 aa30.14■■■□□ 2.42
YIPF3-204ENST00000455768 YTHDC2Q9H6S0 1430 aaKnown RBP30.13■■■□□ 2.41
YIPF3-204ENST00000455768 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
YIPF3-204ENST00000455768 FOXO3O43524 673 aa30.13■■■□□ 2.41
YIPF3-204ENST00000455768 XPCQ01831 940 aaPredicted RBP30.13■■■□□ 2.41
YIPF3-204ENST00000455768 RGS12O14924 1447 aa30.13■■■□□ 2.41
YIPF3-204ENST00000455768 NPHP3Q7Z494 1330 aa30.12■■■□□ 2.41
YIPF3-204ENST00000455768 COL22A1Q8NFW1 1626 aaPredicted RBP30.11■■■□□ 2.41
YIPF3-204ENST00000455768 RBM6P78332 1123 aaKnown RBP30.1■■■□□ 2.41
YIPF3-204ENST00000455768 RAB3GAP2Q9H2M9 1393 aa30.1■■■□□ 2.41
YIPF3-204ENST00000455768 NRXN1Q9ULB1 1477 aa30.1■■■□□ 2.41
YIPF3-204ENST00000455768 MYOM2P54296 1465 aa30.09■■■□□ 2.41
YIPF3-204ENST00000455768 C14orf93Q9H972 538 aaKnown RBP30.09■■■□□ 2.41
YIPF3-204ENST00000455768 CFAP70Q5T0N1 1121 aa30.07■■■□□ 2.4
YIPF3-204ENST00000455768 FMN2Q9NZ56 1722 aa30.05■■■□□ 2.4
YIPF3-204ENST00000455768 ACIN1Q9UKV3 1341 aaKnown RBP30.04■■■□□ 2.4
YIPF3-204ENST00000455768 FNBP4Q8N3X1 1017 aaPredicted RBP30.04■■■□□ 2.4
YIPF3-204ENST00000455768 USP21Q9UK80 565 aa30.04■■■□□ 2.4
YIPF3-204ENST00000455768 SIRT1Q96EB6 747 aa30.02■■■□□ 2.4
YIPF3-204ENST00000455768 DHX57Q6P158 1386 aaKnown RBP29.98■■■□□ 2.39
YIPF3-204ENST00000455768 ATRNO75882 1429 aa29.97■■■□□ 2.39
YIPF3-204ENST00000455768 TRPC5Q9UL62 973 aaPredicted RBP29.97■■■□□ 2.39
YIPF3-204ENST00000455768 BCL9LQ86UU0 1499 aa29.96■■■□□ 2.39
YIPF3-204ENST00000455768 SAFB2Q14151 953 aaKnown RBP eCLIP29.96■■■□□ 2.39
YIPF3-204ENST00000455768 PRAM1Q96QH2 718 aa29.96■■■□□ 2.39
YIPF3-204ENST00000455768 SPATA31A3Q5VYP0 1347 aa29.96■■■□□ 2.39
YIPF3-204ENST00000455768 KIF1AQ12756 1690 aa29.94■■■□□ 2.38
YIPF3-204ENST00000455768 RGPD8O14715 1765 aaPredicted RBP29.93■■■□□ 2.38
YIPF3-204ENST00000455768 ADGRB1O14514 1584 aa29.92■■■□□ 2.38
YIPF3-204ENST00000455768 KRT28Q7Z3Y7 464 aa29.92■■■□□ 2.38
YIPF3-204ENST00000455768 MARF1Q9Y4F3 1742 aaKnown RBP29.92■■■□□ 2.38
YIPF3-204ENST00000455768 PHF8Q9UPP1 1060 aa29.9■■■□□ 2.38
YIPF3-204ENST00000455768 DLC1Q96QB1 1528 aa29.89■■■□□ 2.38
YIPF3-204ENST00000455768 KDM2AQ9Y2K7 1162 aa29.85■■■□□ 2.37
YIPF3-204ENST00000455768 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
YIPF3-204ENST00000455768 POGKQ9P215 609 aa29.84■■■□□ 2.37
YIPF3-204ENST00000455768 TRAK1Q9UPV9 953 aa29.84■■■□□ 2.37
YIPF3-204ENST00000455768 TNS3Q68CZ2 1445 aa29.84■■■□□ 2.37
YIPF3-204ENST00000455768 SLIT2O94813 1529 aa29.83■■■□□ 2.37
YIPF3-204ENST00000455768 ATAD2Q6PL18 1390 aa29.83■■■□□ 2.37
YIPF3-204ENST00000455768 CABLES1Q8TDN4 633 aa29.83■■■□□ 2.37
YIPF3-204ENST00000455768 DCAF11Q8TEB1 546 aa29.83■■■□□ 2.37
YIPF3-204ENST00000455768 GJD4Q96KN9 370 aaPredicted RBP29.82■■■□□ 2.36
YIPF3-204ENST00000455768 ADGRB2O60241 1585 aa29.81■■■□□ 2.36
YIPF3-204ENST00000455768 HIRIP3Q9BW71 556 aaPredicted RBP29.81■■■□□ 2.36
YIPF3-204ENST00000455768 EP400Q96L91 3159 aa29.8■■■□□ 2.36
YIPF3-204ENST00000455768 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
YIPF3-204ENST00000455768 PMFBP1Q8TBY8 1022 aa29.8■■■□□ 2.36
YIPF3-204ENST00000455768 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
YIPF3-204ENST00000455768 SBNO1A3KN83 1393 aa29.78■■■□□ 2.36
YIPF3-204ENST00000455768 PSME1Q06323 249 aa29.78■■■□□ 2.36
YIPF3-204ENST00000455768 UNC5CLQ8IV45 518 aa29.78■■■□□ 2.36
YIPF3-204ENST00000455768 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.78■■■□□ 2.36
YIPF3-204ENST00000455768 MINK1Q8N4C8 1332 aaPredicted RBP29.77■■■□□ 2.36
YIPF3-204ENST00000455768 PRR36Q9H6K5 1346 aa29.77■■■□□ 2.36
YIPF3-204ENST00000455768 GLI3P10071 1580 aa29.77■■■□□ 2.36
YIPF3-204ENST00000455768 RALGAPBQ86X10 1494 aa29.76■■■□□ 2.35
YIPF3-204ENST00000455768 HRCP23327 699 aa29.76■■■□□ 2.35
YIPF3-204ENST00000455768 LMOD2Q6P5Q4 547 aa29.74■■■□□ 2.35
YIPF3-204ENST00000455768 ABCA3Q99758 1704 aa29.73■■■□□ 2.35
YIPF3-204ENST00000455768 HAP1P54257 671 aaPredicted RBP29.71■■■□□ 2.35
YIPF3-204ENST00000455768 ARHGEF10O15013 1369 aa29.71■■■□□ 2.35
YIPF3-204ENST00000455768 TRPM3Q9HCF6 1732 aaPredicted RBP29.7■■■□□ 2.34
YIPF3-204ENST00000455768 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
YIPF3-204ENST00000455768 TULP4Q9NRJ4 1543 aa29.69■■■□□ 2.34
YIPF3-204ENST00000455768 STAC3Q96MF2 364 aa29.68■■■□□ 2.34
YIPF3-204ENST00000455768 PLCH1Q4KWH8 1693 aa29.67■■■□□ 2.34
YIPF3-204ENST00000455768 FAM83GA6ND36 823 aa29.66■■■□□ 2.34
YIPF3-204ENST00000455768 SRCAPQ6ZRS2 3230 aa29.66■■■□□ 2.34
YIPF3-204ENST00000455768 ARHGEF28Q8N1W1 1705 aaKnown RBP29.65■■■□□ 2.34
YIPF3-204ENST00000455768 VPS72Q15906 364 aa29.64■■■□□ 2.34
YIPF3-204ENST00000455768 EIF3AQ14152 1382 aaKnown RBP29.64■■■□□ 2.33
YIPF3-204ENST00000455768 ALS2Q96Q42 1657 aa29.63■■■□□ 2.33
YIPF3-204ENST00000455768 NWD2Q9ULI1 1742 aa29.62■■■□□ 2.33
YIPF3-204ENST00000455768 GPRASP1Q5JY77 1395 aa29.62■■■□□ 2.33
YIPF3-204ENST00000455768 BRWD3Q6RI45 1802 aa29.61■■■□□ 2.33
YIPF3-204ENST00000455768 SEPT12Q8IYM1 358 aa29.6■■■□□ 2.33
YIPF3-204ENST00000455768 ATP7BP35670 1465 aa29.59■■■□□ 2.33
YIPF3-204ENST00000455768 ONECUT3O60422 494 aaPredicted RBP29.57■■■□□ 2.32
YIPF3-204ENST00000455768 CCDC125Q86Z20 511 aa29.57■■■□□ 2.32
YIPF3-204ENST00000455768 NGDNQ8NEJ9 315 aaKnown RBP29.57■■■□□ 2.32
YIPF3-204ENST00000455768 CCDC9Q9Y3X0 531 aaKnown RBP29.57■■■□□ 2.32
YIPF3-204ENST00000455768 NRAPQ86VF7 1730 aa29.55■■■□□ 2.32
YIPF3-204ENST00000455768 NUDT16Q96DE0 195 aaKnown RBP29.55■■■□□ 2.32
YIPF3-204ENST00000455768 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
YIPF3-204ENST00000455768 NBPF1Q3BBV0 1214 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms