RNA–Protein interactions for RNA: ENST00000455429.3

C1DP4-201, Transcript of C1D nuclear receptor corepressor pseudogene 4, humanhuman

BASIC

Gene C1DP4, Length 424 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP4-201ENST00000455429 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
C1DP4-201ENST00000455429 RNF223E7ERA6 249 aa7.97□□□□□ -1.13
C1DP4-201ENST00000455429 SPTLC1O15269 473 aa7.97□□□□□ -1.13
C1DP4-201ENST00000455429 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
C1DP4-201ENST00000455429 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
C1DP4-201ENST00000455429 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
C1DP4-201ENST00000455429 FAM160A2Q8N612 972 aaPredicted RBP7.97□□□□□ -1.13
C1DP4-201ENST00000455429 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
C1DP4-201ENST00000455429 C6orf229H3BNL8 230 aa7.96□□□□□ -1.14
C1DP4-201ENST00000455429 RIC3Q7Z5B4 369 aa7.96□□□□□ -1.14
C1DP4-201ENST00000455429 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
C1DP4-201ENST00000455429 SYMPKQ92797 1274 aaKnown RBP7.95□□□□□ -1.14
C1DP4-201ENST00000455429 PRDM9Q9NQV7 894 aa7.95□□□□□ -1.14
C1DP4-201ENST00000455429 PLEKHG3A1L390 1219 aa7.94□□□□□ -1.14
C1DP4-201ENST00000455429 PPEF1O14829 653 aaPredicted RBP7.94□□□□□ -1.14
C1DP4-201ENST00000455429 ANKLE1Q8NAG6 615 aa7.94□□□□□ -1.14
C1DP4-201ENST00000455429 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
C1DP4-201ENST00000455429 MTMR2Q13614 643 aa7.93□□□□□ -1.14
C1DP4-201ENST00000455429 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
C1DP4-201ENST00000455429 SPDYE5A6NIY4 337 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 MMP16P51512 607 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 CSPP1Q1MSJ5 1256 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 SH3D19Q5HYK7 790 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 LIMD1Q9UGP4 676 aa7.92□□□□□ -1.14
C1DP4-201ENST00000455429 DXOO77932 396 aaKnown RBP7.91□□□□□ -1.14
C1DP4-201ENST00000455429 PRPF38BQ5VTL8 546 aaKnown RBP7.91□□□□□ -1.14
C1DP4-201ENST00000455429 PRKD2Q9BZL6 878 aa7.91□□□□□ -1.14
C1DP4-201ENST00000455429 ZBTB3Q9H5J0 574 aa7.91□□□□□ -1.14
C1DP4-201ENST00000455429 FCF1Q9Y324 198 aaKnown RBP7.91□□□□□ -1.14
C1DP4-201ENST00000455429 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
C1DP4-201ENST00000455429 IL27Q8NEV9 243 aa7.9□□□□□ -1.14
C1DP4-201ENST00000455429 V9GY48 417 aaPredicted RBP7.9□□□□□ -1.14
C1DP4-201ENST00000455429 JUNDP17535 347 aa7.89□□□□□ -1.15
C1DP4-201ENST00000455429 HRCP23327 699 aa7.89□□□□□ -1.15
C1DP4-201ENST00000455429 PRR7Q8TB68 274 aa7.89□□□□□ -1.15
C1DP4-201ENST00000455429 CABLES1Q8TDN4 633 aa7.89□□□□□ -1.15
C1DP4-201ENST00000455429 QPCTQ16769 361 aa7.88□□□□□ -1.15
C1DP4-201ENST00000455429 PLA2G2CQ5R387 149 aa7.88□□□□□ -1.15
C1DP4-201ENST00000455429 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
C1DP4-201ENST00000455429 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
C1DP4-201ENST00000455429 LILRB3O75022 631 aa7.87□□□□□ -1.15
C1DP4-201ENST00000455429 SLC19A1P41440 591 aa7.87□□□□□ -1.15
C1DP4-201ENST00000455429 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
C1DP4-201ENST00000455429 NUTM2AQ8IVF1 878 aaPredicted RBP7.87□□□□□ -1.15
C1DP4-201ENST00000455429 CFAP99D6REC4 459 aa7.86□□□□□ -1.15
C1DP4-201ENST00000455429 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
C1DP4-201ENST00000455429 EMID1Q96A84 441 aaPredicted RBP7.86□□□□□ -1.15
C1DP4-201ENST00000455429 GOPCQ9HD26 462 aa7.86□□□□□ -1.15
C1DP4-201ENST00000455429 ATP1B4Q9UN42 357 aaPredicted RBP7.86□□□□□ -1.15
C1DP4-201ENST00000455429 LIAT1Q6ZQX7 453 aa7.85□□□□□ -1.15
C1DP4-201ENST00000455429 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
C1DP4-201ENST00000455429 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
C1DP4-201ENST00000455429 SPRYD7Q5W111 196 aa7.84□□□□□ -1.15
C1DP4-201ENST00000455429 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
C1DP4-201ENST00000455429 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.15
C1DP4-201ENST00000455429 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
C1DP4-201ENST00000455429 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
C1DP4-201ENST00000455429 RPIAP49247 311 aa7.83□□□□□ -1.16
C1DP4-201ENST00000455429 PTPRNQ16849 979 aa7.83□□□□□ -1.16
C1DP4-201ENST00000455429 RTL5Q5HYW3 569 aaPredicted RBP7.83□□□□□ -1.16
C1DP4-201ENST00000455429 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
C1DP4-201ENST00000455429 TSC1Q92574 1164 aa7.82□□□□□ -1.16
C1DP4-201ENST00000455429 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
C1DP4-201ENST00000455429 ZNF598Q86UK7 904 aaKnown RBP7.81□□□□□ -1.16
C1DP4-201ENST00000455429 HELBQ8NG08 1087 aaPredicted RBP7.81□□□□□ -1.16
C1DP4-201ENST00000455429 CD2BP2O95400 341 aaKnown RBP7.8□□□□□ -1.16
C1DP4-201ENST00000455429 TRIM32Q13049 653 aa7.8□□□□□ -1.16
C1DP4-201ENST00000455429 ZNF697Q5TEC3 545 aa7.8□□□□□ -1.16
C1DP4-201ENST00000455429 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
C1DP4-201ENST00000455429 IRX2Q9BZI1 471 aaPredicted RBP7.8□□□□□ -1.16
C1DP4-201ENST00000455429 EVA1BQ9NVM1 165 aa7.8□□□□□ -1.16
C1DP4-201ENST00000455429 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
C1DP4-201ENST00000455429 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
C1DP4-201ENST00000455429 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
C1DP4-201ENST00000455429 PTCRAQ6ISU1 281 aaPredicted RBP7.78□□□□□ -1.16
C1DP4-201ENST00000455429 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
C1DP4-201ENST00000455429 CTHP32929 405 aa7.76□□□□□ -1.17
C1DP4-201ENST00000455429 CTDSPL2Q05D32 466 aa7.76□□□□□ -1.17
C1DP4-201ENST00000455429 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
C1DP4-201ENST00000455429 RFC5P40937 340 aa7.75□□□□□ -1.17
C1DP4-201ENST00000455429 TRIM67Q6ZTA4 783 aa7.75□□□□□ -1.17
C1DP4-201ENST00000455429 MAP10Q9P2G4 905 aa7.75□□□□□ -1.17
C1DP4-201ENST00000455429 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
C1DP4-201ENST00000455429 GDF9O60383 454 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 GFRA3O60609 400 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 AP1G2O75843 785 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 PRR20EP86478 221 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 PRR20CP86479 221 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 PRR20DP86480 221 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 PRR20BP86481 221 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 PRR20AP86496 221 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 LAPTM4AQ15012 233 aa7.74□□□□□ -1.17
C1DP4-201ENST00000455429 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
C1DP4-201ENST00000455429 WNT7BP56706 349 aa7.73□□□□□ -1.17
C1DP4-201ENST00000455429 FOXC1Q12948 553 aa7.73□□□□□ -1.17
C1DP4-201ENST00000455429 PKD2L1Q9P0L9 805 aa7.73□□□□□ -1.17
C1DP4-201ENST00000455429 NRG2O14511 850 aaPredicted RBP7.72□□□□□ -1.17
C1DP4-201ENST00000455429 TMEM259Q4ZIN3 620 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms