RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
SH3BP4-207ENST00000454947 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
SH3BP4-207ENST00000454947 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
SH3BP4-207ENST00000454947 XIRP1Q702N8 1843 aaKnown RBP13.22□□□□□ -0.29
SH3BP4-207ENST00000454947 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
SH3BP4-207ENST00000454947 CERKQ8TCT0 537 aa13.21□□□□□ -0.29
SH3BP4-207ENST00000454947 STK26Q9P289 416 aa13.21□□□□□ -0.29
SH3BP4-207ENST00000454947 DCCP43146 1447 aa13.2□□□□□ -0.3
SH3BP4-207ENST00000454947 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
SH3BP4-207ENST00000454947 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
SH3BP4-207ENST00000454947 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
SH3BP4-207ENST00000454947 MSH6P52701 1360 aa13.18□□□□□ -0.3
SH3BP4-207ENST00000454947 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
SH3BP4-207ENST00000454947 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
SH3BP4-207ENST00000454947 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
SH3BP4-207ENST00000454947 TOPAZ1Q8N9V7 1692 aa13.17□□□□□ -0.3
SH3BP4-207ENST00000454947 ATP7BP35670 1465 aa13.16□□□□□ -0.3
SH3BP4-207ENST00000454947 MYOM1P52179 1685 aa13.16□□□□□ -0.3
SH3BP4-207ENST00000454947 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
SH3BP4-207ENST00000454947 POGKQ9P215 609 aa13.16□□□□□ -0.3
SH3BP4-207ENST00000454947 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
SH3BP4-207ENST00000454947 ANKARQ7Z5J8 1434 aa13.15□□□□□ -0.3
SH3BP4-207ENST00000454947 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
SH3BP4-207ENST00000454947 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
SH3BP4-207ENST00000454947 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
SH3BP4-207ENST00000454947 TOM1O60784 492 aa13.13□□□□□ -0.31
SH3BP4-207ENST00000454947 ATF3P18847 181 aa13.13□□□□□ -0.31
SH3BP4-207ENST00000454947 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
SH3BP4-207ENST00000454947 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
SH3BP4-207ENST00000454947 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
SH3BP4-207ENST00000454947 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 TMF1P82094 1093 aa13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
SH3BP4-207ENST00000454947 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
SH3BP4-207ENST00000454947 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
SH3BP4-207ENST00000454947 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
SH3BP4-207ENST00000454947 MST1RQ04912 1400 aa13.11□□□□□ -0.31
SH3BP4-207ENST00000454947 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
SH3BP4-207ENST00000454947 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
SH3BP4-207ENST00000454947 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
SH3BP4-207ENST00000454947 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
SH3BP4-207ENST00000454947 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
SH3BP4-207ENST00000454947 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
SH3BP4-207ENST00000454947 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
SH3BP4-207ENST00000454947 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
SH3BP4-207ENST00000454947 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
SH3BP4-207ENST00000454947 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
SH3BP4-207ENST00000454947 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
SH3BP4-207ENST00000454947 MON2Q7Z3U7 1717 aa13.04□□□□□ -0.32
SH3BP4-207ENST00000454947 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
SH3BP4-207ENST00000454947 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
SH3BP4-207ENST00000454947 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
SH3BP4-207ENST00000454947 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
SH3BP4-207ENST00000454947 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
SH3BP4-207ENST00000454947 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
SH3BP4-207ENST00000454947 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
SH3BP4-207ENST00000454947 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
SH3BP4-207ENST00000454947 SSH2Q76I76 1423 aa13.02□□□□□ -0.33
SH3BP4-207ENST00000454947 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
SH3BP4-207ENST00000454947 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
SH3BP4-207ENST00000454947 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
SH3BP4-207ENST00000454947 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
SH3BP4-207ENST00000454947 SLC12A5Q9H2X9 1139 aa12.99□□□□□ -0.33
SH3BP4-207ENST00000454947 USP6P35125 1406 aa12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
SH3BP4-207ENST00000454947 PXDNQ92626 1479 aa12.97□□□□□ -0.33
SH3BP4-207ENST00000454947 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
SH3BP4-207ENST00000454947 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
SH3BP4-207ENST00000454947 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
SH3BP4-207ENST00000454947 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
SH3BP4-207ENST00000454947 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
SH3BP4-207ENST00000454947 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
SH3BP4-207ENST00000454947 ACEP12821 1306 aa12.95□□□□□ -0.34
SH3BP4-207ENST00000454947 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
SH3BP4-207ENST00000454947 PANK3Q9H999 370 aa12.95□□□□□ -0.34
SH3BP4-207ENST00000454947 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
SH3BP4-207ENST00000454947 PHLPP1O60346 1717 aa12.94□□□□□ -0.34
SH3BP4-207ENST00000454947 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
SH3BP4-207ENST00000454947 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 NSD2O96028 1365 aa12.93□□□□□ -0.34
SH3BP4-207ENST00000454947 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms