RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
NCL-206ENST00000454824 WAPLQ7Z5K2 1190 aa9.84□□□□□ -0.83
NCL-206ENST00000454824 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
NCL-206ENST00000454824 FKBP8Q14318 412 aa9.83□□□□□ -0.84
NCL-206ENST00000454824 ROBO2Q9HCK4 1378 aa9.83□□□□□ -0.84
NCL-206ENST00000454824 YTHDC2Q9H6S0 1430 aaKnown RBP9.82□□□□□ -0.84
NCL-206ENST00000454824 PRAM1Q96QH2 718 aa9.82□□□□□ -0.84
NCL-206ENST00000454824 ABCC11Q96J66 1382 aa9.82□□□□□ -0.84
NCL-206ENST00000454824 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
NCL-206ENST00000454824 NRXN1Q9ULB1 1477 aa9.81□□□□□ -0.84
NCL-206ENST00000454824 CAPN15O75808 1086 aa9.81□□□□□ -0.84
NCL-206ENST00000454824 HSPA1LP34931 641 aa9.81□□□□□ -0.84
NCL-206ENST00000454824 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
NCL-206ENST00000454824 LAMC1P11047 1609 aa9.81□□□□□ -0.84
NCL-206ENST00000454824 XRN1Q8IZH2 1706 aaKnown RBP9.8□□□□□ -0.84
NCL-206ENST00000454824 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
NCL-206ENST00000454824 PTCH1Q13635 1447 aa9.8□□□□□ -0.84
NCL-206ENST00000454824 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
NCL-206ENST00000454824 ADGRL3Q9HAR2 1447 aa9.79□□□□□ -0.84
NCL-206ENST00000454824 MINK1Q8N4C8 1332 aaPredicted RBP9.79□□□□□ -0.84
NCL-206ENST00000454824 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
NCL-206ENST00000454824 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
NCL-206ENST00000454824 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
NCL-206ENST00000454824 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
NCL-206ENST00000454824 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
NCL-206ENST00000454824 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
NCL-206ENST00000454824 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
NCL-206ENST00000454824 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.84
NCL-206ENST00000454824 DCCP43146 1447 aa9.77□□□□□ -0.85
NCL-206ENST00000454824 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
NCL-206ENST00000454824 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
NCL-206ENST00000454824 TECPR2O15040 1411 aa9.76□□□□□ -0.85
NCL-206ENST00000454824 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
NCL-206ENST00000454824 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
NCL-206ENST00000454824 POLA2Q14181 598 aa9.75□□□□□ -0.85
NCL-206ENST00000454824 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
NCL-206ENST00000454824 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
NCL-206ENST00000454824 ASXL1Q8IXJ9 1541 aa9.75□□□□□ -0.85
NCL-206ENST00000454824 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
NCL-206ENST00000454824 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
NCL-206ENST00000454824 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
NCL-206ENST00000454824 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
NCL-206ENST00000454824 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
NCL-206ENST00000454824 ADGRB1O14514 1584 aa9.73□□□□□ -0.85
NCL-206ENST00000454824 WASLO00401 505 aaPredicted RBP9.73□□□□□ -0.85
NCL-206ENST00000454824 SRPK2P78362 688 aaKnown RBP9.73□□□□□ -0.85
NCL-206ENST00000454824 EIF3AQ14152 1382 aaKnown RBP9.73□□□□□ -0.85
NCL-206ENST00000454824 MST1RQ04912 1400 aa9.73□□□□□ -0.85
NCL-206ENST00000454824 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
NCL-206ENST00000454824 DLC1Q96QB1 1528 aa9.72□□□□□ -0.85
NCL-206ENST00000454824 FOXO3O43524 673 aa9.72□□□□□ -0.85
NCL-206ENST00000454824 PSME1Q06323 249 aa9.72□□□□□ -0.85
NCL-206ENST00000454824 DDX17Q92841 729 aaKnown RBP9.72□□□□□ -0.85
NCL-206ENST00000454824 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
NCL-206ENST00000454824 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
NCL-206ENST00000454824 PHLPP1O60346 1717 aa9.71□□□□□ -0.85
NCL-206ENST00000454824 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
NCL-206ENST00000454824 PMFBP1Q8TBY8 1022 aa9.71□□□□□ -0.86
NCL-206ENST00000454824 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
NCL-206ENST00000454824 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.86
NCL-206ENST00000454824 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
NCL-206ENST00000454824 EVC2Q86UK5 1308 aa9.7□□□□□ -0.86
NCL-206ENST00000454824 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
NCL-206ENST00000454824 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
NCL-206ENST00000454824 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
NCL-206ENST00000454824 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
NCL-206ENST00000454824 NUDT16Q96DE0 195 aaKnown RBP9.69□□□□□ -0.86
NCL-206ENST00000454824 JCADQ9P266 1359 aa9.68□□□□□ -0.86
NCL-206ENST00000454824 DISP3Q9P2K9 1392 aa9.68□□□□□ -0.86
NCL-206ENST00000454824 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
NCL-206ENST00000454824 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
NCL-206ENST00000454824 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
NCL-206ENST00000454824 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
NCL-206ENST00000454824 ARHGEF28Q8N1W1 1705 aaKnown RBP9.68□□□□□ -0.86
NCL-206ENST00000454824 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
NCL-206ENST00000454824 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
NCL-206ENST00000454824 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
NCL-206ENST00000454824 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
NCL-206ENST00000454824 FMN2Q9NZ56 1722 aa9.66□□□□□ -0.86
NCL-206ENST00000454824 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
NCL-206ENST00000454824 RGPD8O14715 1765 aaPredicted RBP9.65□□□□□ -0.86
NCL-206ENST00000454824 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
NCL-206ENST00000454824 ABCB7O75027 752 aa9.65□□□□□ -0.86
NCL-206ENST00000454824 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
NCL-206ENST00000454824 AHDC1Q5TGY3 1603 aaPredicted RBP9.64□□□□□ -0.87
NCL-206ENST00000454824 SOS2Q07890 1332 aaPredicted RBP9.64□□□□□ -0.87
NCL-206ENST00000454824 PRR36Q9H6K5 1346 aa9.64□□□□□ -0.87
NCL-206ENST00000454824 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
NCL-206ENST00000454824 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
NCL-206ENST00000454824 TULP4Q9NRJ4 1543 aa9.63□□□□□ -0.87
NCL-206ENST00000454824 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
NCL-206ENST00000454824 TMF1P82094 1093 aa9.63□□□□□ -0.87
NCL-206ENST00000454824 ADGRB2O60241 1585 aa9.63□□□□□ -0.87
NCL-206ENST00000454824 USP47Q96K76 1375 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms