RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 SETD1BQ9UPS6 1966 aaKnown RBP8.41□□□□□ -1.06
MSH6-205ENST00000454137 CARD11Q9BXL7 1154 aa8.41□□□□□ -1.06
MSH6-205ENST00000454137 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
MSH6-205ENST00000454137 A2ML1A8K2U0 1454 aa8.4□□□□□ -1.06
MSH6-205ENST00000454137 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
MSH6-205ENST00000454137 TNRQ92752 1358 aa8.4□□□□□ -1.06
MSH6-205ENST00000454137 ZNF326Q5BKZ1 582 aaKnown RBP8.4□□□□□ -1.06
MSH6-205ENST00000454137 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.06
MSH6-205ENST00000454137 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.07
MSH6-205ENST00000454137 PITPNM1O00562 1244 aa8.39□□□□□ -1.07
MSH6-205ENST00000454137 HDGFP51858 240 aaKnown RBP8.39□□□□□ -1.07
MSH6-205ENST00000454137 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
MSH6-205ENST00000454137 C14orf93Q9H972 538 aaKnown RBP8.39□□□□□ -1.07
MSH6-205ENST00000454137 EIF3AQ14152 1382 aaKnown RBP8.38□□□□□ -1.07
MSH6-205ENST00000454137 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
MSH6-205ENST00000454137 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
MSH6-205ENST00000454137 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
MSH6-205ENST00000454137 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
MSH6-205ENST00000454137 ADGRB1O14514 1584 aa8.38□□□□□ -1.07
MSH6-205ENST00000454137 CCDC7Q96M83 1385 aa8.37□□□□□ -1.07
MSH6-205ENST00000454137 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
MSH6-205ENST00000454137 MLECQ14165 292 aa8.37□□□□□ -1.07
MSH6-205ENST00000454137 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
MSH6-205ENST00000454137 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
MSH6-205ENST00000454137 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
MSH6-205ENST00000454137 SLIT1O75093 1534 aa8.36□□□□□ -1.07
MSH6-205ENST00000454137 STK25O00506 426 aa8.36□□□□□ -1.07
MSH6-205ENST00000454137 NBPF1Q3BBV0 1214 aa8.36□□□□□ -1.07
MSH6-205ENST00000454137 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
MSH6-205ENST00000454137 SETD1AO15047 1707 aaKnown RBP8.35□□□□□ -1.07
MSH6-205ENST00000454137 RIMS1Q86UR5 1692 aaKnown RBP8.35□□□□□ -1.07
MSH6-205ENST00000454137 ARHGAP23Q9P227 1491 aa8.35□□□□□ -1.07
MSH6-205ENST00000454137 ST20-MTHFSA0A0A6YYL1 179 aa8.35□□□□□ -1.07
MSH6-205ENST00000454137 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
MSH6-205ENST00000454137 RIMS2Q9UQ26 1411 aa8.35□□□□□ -1.07
MSH6-205ENST00000454137 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
MSH6-205ENST00000454137 PUS7Q96PZ0 661 aaKnown RBP8.34□□□□□ -1.07
MSH6-205ENST00000454137 TESK2Q96S53 571 aa8.34□□□□□ -1.07
MSH6-205ENST00000454137 TMEM2Q9UHN6 1383 aa8.34□□□□□ -1.07
MSH6-205ENST00000454137 KIF7Q2M1P5 1343 aa8.33□□□□□ -1.08
MSH6-205ENST00000454137 ALKQ9UM73 1620 aa8.33□□□□□ -1.08
MSH6-205ENST00000454137 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
MSH6-205ENST00000454137 ARHGEF28Q8N1W1 1705 aaKnown RBP8.33□□□□□ -1.08
MSH6-205ENST00000454137 DLC1Q96QB1 1528 aa8.33□□□□□ -1.08
MSH6-205ENST00000454137 NRXN3Q9Y4C0 1643 aa8.32□□□□□ -1.08
MSH6-205ENST00000454137 KNDC1Q76NI1 1749 aa8.32□□□□□ -1.08
MSH6-205ENST00000454137 TMF1P82094 1093 aa8.32□□□□□ -1.08
MSH6-205ENST00000454137 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
MSH6-205ENST00000454137 DIP2AQ14689 1571 aa8.31□□□□□ -1.08
MSH6-205ENST00000454137 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
MSH6-205ENST00000454137 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
MSH6-205ENST00000454137 PLEKHG1Q9ULL1 1385 aa8.31□□□□□ -1.08
MSH6-205ENST00000454137 QRICH2Q9H0J4 1663 aa8.3□□□□□ -1.08
MSH6-205ENST00000454137 ASXL1Q8IXJ9 1541 aa8.3□□□□□ -1.08
MSH6-205ENST00000454137 GTPBP6O43824 516 aaPredicted RBP8.3□□□□□ -1.08
MSH6-205ENST00000454137 PYGBP11216 843 aa8.3□□□□□ -1.08
MSH6-205ENST00000454137 NKX1-1Q15270 411 aaPredicted RBP8.3□□□□□ -1.08
MSH6-205ENST00000454137 KTN1Q86UP2 1357 aaKnown RBP8.3□□□□□ -1.08
MSH6-205ENST00000454137 ABCC11Q96J66 1382 aa8.3□□□□□ -1.08
MSH6-205ENST00000454137 MED14O60244 1454 aa8.3□□□□□ -1.08
MSH6-205ENST00000454137 TECPR2O15040 1411 aa8.29□□□□□ -1.08
MSH6-205ENST00000454137 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 CCER2I3L3R5 266 aa8.29□□□□□ -1.08
MSH6-205ENST00000454137 ANP32CO43423 234 aa8.29□□□□□ -1.08
MSH6-205ENST00000454137 MYT1Q01538 1121 aa8.29□□□□□ -1.08
MSH6-205ENST00000454137 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 BCL11BQ9C0K0 894 aaPredicted RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
MSH6-205ENST00000454137 CENPJQ9HC77 1338 aaPredicted RBP8.29□□□□□ -1.08
MSH6-205ENST00000454137 PTPRMP28827 1452 aa8.28□□□□□ -1.08
MSH6-205ENST00000454137 LRPPRCP42704 1394 aaKnown RBP8.28□□□□□ -1.08
MSH6-205ENST00000454137 EID1Q9Y6B2 187 aa8.28□□□□□ -1.08
MSH6-205ENST00000454137 FAM135BQ49AJ0 1406 aa8.28□□□□□ -1.08
MSH6-205ENST00000454137 PIK3R4Q99570 1358 aa8.27□□□□□ -1.09
MSH6-205ENST00000454137 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
MSH6-205ENST00000454137 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
MSH6-205ENST00000454137 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
MSH6-205ENST00000454137 CPS1P31327 1500 aa8.27□□□□□ -1.09
MSH6-205ENST00000454137 ADAMTS13Q76LX8 1427 aa8.27□□□□□ -1.09
MSH6-205ENST00000454137 MYOM1P52179 1685 aa8.27□□□□□ -1.09
MSH6-205ENST00000454137 NINLQ9Y2I6 1382 aa8.26□□□□□ -1.09
MSH6-205ENST00000454137 NBR1Q14596 966 aa8.26□□□□□ -1.09
MSH6-205ENST00000454137 TBX22Q9Y458 520 aa8.26□□□□□ -1.09
MSH6-205ENST00000454137 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
MSH6-205ENST00000454137 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
MSH6-205ENST00000454137 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
MSH6-205ENST00000454137 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
MSH6-205ENST00000454137 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
MSH6-205ENST00000454137 TSPYL2Q9H2G4 693 aaPredicted RBP8.24□□□□□ -1.09
MSH6-205ENST00000454137 EVC2Q86UK5 1308 aa8.24□□□□□ -1.09
MSH6-205ENST00000454137 ADGRB2O60241 1585 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 USP32Q8NFA0 1604 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
MSH6-205ENST00000454137 LTKP29376 864 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 CHADLQ6NUI6 762 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 PRKRIP1Q9H875 184 aaPredicted RBP8.23□□□□□ -1.09
MSH6-205ENST00000454137 TRAK1Q9UPV9 953 aa8.23□□□□□ -1.09
MSH6-205ENST00000454137 CHD2O14647 1828 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms