RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 FCHSD2O94868 740 aa11.49□□□□□ -0.57
LINC00299-204ENST00000454043 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
LINC00299-204ENST00000454043 EYA1Q99502 592 aa11.49□□□□□ -0.57
LINC00299-204ENST00000454043 PLEKHD1A6NEE1 506 aa11.48□□□□□ -0.57
LINC00299-204ENST00000454043 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
LINC00299-204ENST00000454043 WBP1LQ9NX94 342 aa11.48□□□□□ -0.57
LINC00299-204ENST00000454043 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
LINC00299-204ENST00000454043 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
LINC00299-204ENST00000454043 PLB1Q6P1J6 1458 aa11.47□□□□□ -0.57
LINC00299-204ENST00000454043 UACAQ9BZF9 1416 aa11.47□□□□□ -0.57
LINC00299-204ENST00000454043 RRBP1Q9P2E9 1410 aaKnown RBP11.47□□□□□ -0.57
LINC00299-204ENST00000454043 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
LINC00299-204ENST00000454043 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
LINC00299-204ENST00000454043 ABCA8O94911 1581 aa11.45□□□□□ -0.58
LINC00299-204ENST00000454043 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
LINC00299-204ENST00000454043 NYAP1Q6ZVC0 841 aa11.45□□□□□ -0.58
LINC00299-204ENST00000454043 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
LINC00299-204ENST00000454043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00299-204ENST00000454043 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
LINC00299-204ENST00000454043 HIC1Q14526 733 aa11.44□□□□□ -0.58
LINC00299-204ENST00000454043 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
LINC00299-204ENST00000454043 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
LINC00299-204ENST00000454043 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
LINC00299-204ENST00000454043 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
LINC00299-204ENST00000454043 PPP4CP60510 307 aa11.42□□□□□ -0.58
LINC00299-204ENST00000454043 UHRF1BP1LA0JNW5 1464 aa11.42□□□□□ -0.58
LINC00299-204ENST00000454043 NCOA2Q15596 1464 aa11.42□□□□□ -0.58
LINC00299-204ENST00000454043 TROQ12816 1431 aaPredicted RBP11.42□□□□□ -0.58
LINC00299-204ENST00000454043 ATP10BO94823 1461 aa11.41□□□□□ -0.58
LINC00299-204ENST00000454043 GPR37O15354 613 aa11.41□□□□□ -0.58
LINC00299-204ENST00000454043 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
LINC00299-204ENST00000454043 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
LINC00299-204ENST00000454043 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
LINC00299-204ENST00000454043 GNPATO15228 680 aa11.4□□□□□ -0.58
LINC00299-204ENST00000454043 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
LINC00299-204ENST00000454043 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
LINC00299-204ENST00000454043 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
LINC00299-204ENST00000454043 ABCC2Q92887 1545 aa11.4□□□□□ -0.59
LINC00299-204ENST00000454043 FECHP22830 423 aa11.39□□□□□ -0.59
LINC00299-204ENST00000454043 ZEB1P37275 1124 aaPredicted RBP11.39□□□□□ -0.59
LINC00299-204ENST00000454043 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
LINC00299-204ENST00000454043 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
LINC00299-204ENST00000454043 FGD6Q6ZV73 1430 aa11.38□□□□□ -0.59
LINC00299-204ENST00000454043 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
LINC00299-204ENST00000454043 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
LINC00299-204ENST00000454043 MAGI3Q5TCQ9 1506 aa11.36□□□□□ -0.59
LINC00299-204ENST00000454043 RCCD1A6NED2 376 aa11.36□□□□□ -0.59
LINC00299-204ENST00000454043 OATP04181 439 aa11.36□□□□□ -0.59
LINC00299-204ENST00000454043 DNAJB2P25686 324 aa11.36□□□□□ -0.59
LINC00299-204ENST00000454043 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
LINC00299-204ENST00000454043 ITGAEP38570 1179 aa11.35□□□□□ -0.59
LINC00299-204ENST00000454043 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
LINC00299-204ENST00000454043 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
LINC00299-204ENST00000454043 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
LINC00299-204ENST00000454043 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
LINC00299-204ENST00000454043 PXYLP1Q8TE99 480 aa11.34□□□□□ -0.59
LINC00299-204ENST00000454043 TMEM134Q9H6X4 195 aa11.34□□□□□ -0.59
LINC00299-204ENST00000454043 KDM5BQ9UGL1 1544 aa11.34□□□□□ -0.59
LINC00299-204ENST00000454043 HRCP23327 699 aa11.33□□□□□ -0.6
LINC00299-204ENST00000454043 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
LINC00299-204ENST00000454043 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
LINC00299-204ENST00000454043 KIF14Q15058 1648 aa11.32□□□□□ -0.6
LINC00299-204ENST00000454043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00299-204ENST00000454043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
LINC00299-204ENST00000454043 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
LINC00299-204ENST00000454043 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
LINC00299-204ENST00000454043 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
LINC00299-204ENST00000454043 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
LINC00299-204ENST00000454043 RNF40O75150 1001 aa11.3□□□□□ -0.6
LINC00299-204ENST00000454043 PTPN23Q9H3S7 1636 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 APLP1P51693 650 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 KCNC4Q03721 635 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
LINC00299-204ENST00000454043 GPATCH8Q9UKJ3 1502 aaKnown RBP11.29□□□□□ -0.6
LINC00299-204ENST00000454043 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
LINC00299-204ENST00000454043 ITSN2Q9NZM3 1697 aa11.27□□□□□ -0.6
LINC00299-204ENST00000454043 ZCCHC11Q5TAX3 1644 aaKnown RBP11.27□□□□□ -0.61
LINC00299-204ENST00000454043 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
LINC00299-204ENST00000454043 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
LINC00299-204ENST00000454043 A0A0G2JS52 829 aa11.25□□□□□ -0.61
LINC00299-204ENST00000454043 EFCAB2Q5VUJ9 269 aa11.25□□□□□ -0.61
LINC00299-204ENST00000454043 WDR7Q9Y4E6 1490 aa11.25□□□□□ -0.61
LINC00299-204ENST00000454043 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
LINC00299-204ENST00000454043 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
LINC00299-204ENST00000454043 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
LINC00299-204ENST00000454043 CLSPNQ9HAW4 1339 aa11.24□□□□□ -0.61
LINC00299-204ENST00000454043 SLC10A3P09131 477 aa11.23□□□□□ -0.61
LINC00299-204ENST00000454043 PHOX2BQ99453 314 aa11.23□□□□□ -0.61
LINC00299-204ENST00000454043 MTRQ99707 1265 aa11.23□□□□□ -0.61
LINC00299-204ENST00000454043 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
LINC00299-204ENST00000454043 PLCH2O75038 1416 aa11.22□□□□□ -0.61
LINC00299-204ENST00000454043 ROCK1Q13464 1354 aa11.22□□□□□ -0.61
LINC00299-204ENST00000454043 ASXL2Q76L83 1435 aa11.22□□□□□ -0.61
LINC00299-204ENST00000454043 IL21Q9HBE4 155 aa11.22□□□□□ -0.61
LINC00299-204ENST00000454043 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
LINC00299-204ENST00000454043 CAMSAP2Q08AD1 1489 aa11.21□□□□□ -0.61
LINC00299-204ENST00000454043 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
LINC00299-204ENST00000454043 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms