RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
RBM39-219ENST00000453310 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
RBM39-219ENST00000453310 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
RBM39-219ENST00000453310 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
RBM39-219ENST00000453310 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
RBM39-219ENST00000453310 ADGRB2O60241 1585 aa22.23■■□□□ 1.15
RBM39-219ENST00000453310 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
RBM39-219ENST00000453310 TOM1O60784 492 aa22.22■■□□□ 1.15
RBM39-219ENST00000453310 ATF3P18847 181 aa22.22■■□□□ 1.15
RBM39-219ENST00000453310 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
RBM39-219ENST00000453310 CENPJQ9HC77 1338 aaPredicted RBP22.22■■□□□ 1.15
RBM39-219ENST00000453310 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
RBM39-219ENST00000453310 HIRIP3Q9BW71 556 aaPredicted RBP22.18■■□□□ 1.14
RBM39-219ENST00000453310 FMN2Q9NZ56 1722 aa22.17■■□□□ 1.14
RBM39-219ENST00000453310 MST1RQ04912 1400 aa22.17■■□□□ 1.14
RBM39-219ENST00000453310 USP47Q96K76 1375 aa22.17■■□□□ 1.14
RBM39-219ENST00000453310 PIP4K2BP78356 416 aa22.14■■□□□ 1.13
RBM39-219ENST00000453310 FBXO41Q8TF61 875 aa22.14■■□□□ 1.13
RBM39-219ENST00000453310 SLAIN2Q9P270 581 aa22.14■■□□□ 1.13
RBM39-219ENST00000453310 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
RBM39-219ENST00000453310 C1orf167Q5SNV9 1468 aa22.12■■□□□ 1.13
RBM39-219ENST00000453310 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
RBM39-219ENST00000453310 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
RBM39-219ENST00000453310 WASLO00401 505 aaPredicted RBP22.11■■□□□ 1.13
RBM39-219ENST00000453310 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
RBM39-219ENST00000453310 ST20-MTHFSA0A0A6YYL1 179 aa22.1■■□□□ 1.13
RBM39-219ENST00000453310 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
RBM39-219ENST00000453310 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
RBM39-219ENST00000453310 ANKARQ7Z5J8 1434 aa22.08■■□□□ 1.13
RBM39-219ENST00000453310 CDK19Q9BWU1 502 aa22.07■■□□□ 1.12
RBM39-219ENST00000453310 RGPD8O14715 1765 aaPredicted RBP22.07■■□□□ 1.12
RBM39-219ENST00000453310 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
RBM39-219ENST00000453310 EVC2Q86UK5 1308 aa22.06■■□□□ 1.12
RBM39-219ENST00000453310 ATP7BP35670 1465 aa22.05■■□□□ 1.12
RBM39-219ENST00000453310 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
RBM39-219ENST00000453310 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
RBM39-219ENST00000453310 TESK2Q96S53 571 aa22.05■■□□□ 1.12
RBM39-219ENST00000453310 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
RBM39-219ENST00000453310 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
RBM39-219ENST00000453310 ORAI2Q96SN7 254 aa22.03■■□□□ 1.12
RBM39-219ENST00000453310 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
RBM39-219ENST00000453310 HSPA5P11021 654 aaKnown RBP22.02■■□□□ 1.12
RBM39-219ENST00000453310 ESCO1Q5FWF5 840 aa22.02■■□□□ 1.12
RBM39-219ENST00000453310 KIF1AQ12756 1690 aa22.01■■□□□ 1.11
RBM39-219ENST00000453310 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
RBM39-219ENST00000453310 NUDT16Q96DE0 195 aaKnown RBP22.01■■□□□ 1.11
RBM39-219ENST00000453310 CABP2Q9NPB3 220 aa22.01■■□□□ 1.11
RBM39-219ENST00000453310 NHSL1Q5SYE7 1610 aa22■■□□□ 1.11
RBM39-219ENST00000453310 SLC24A1O60721 1099 aa22■■□□□ 1.11
RBM39-219ENST00000453310 AHDC1Q5TGY3 1603 aaPredicted RBP21.99■■□□□ 1.11
RBM39-219ENST00000453310 TMF1P82094 1093 aa21.97■■□□□ 1.11
RBM39-219ENST00000453310 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
RBM39-219ENST00000453310 DISP3Q9P2K9 1392 aa21.97■■□□□ 1.11
RBM39-219ENST00000453310 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
RBM39-219ENST00000453310 ILDR1Q86SU0 546 aaPredicted RBP21.96■■□□□ 1.11
RBM39-219ENST00000453310 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
RBM39-219ENST00000453310 ATAD2Q6PL18 1390 aa21.96■■□□□ 1.11
RBM39-219ENST00000453310 PPIP5K1Q6PFW1 1433 aa21.95■■□□□ 1.1
RBM39-219ENST00000453310 HSPA1LP34931 641 aa21.94■■□□□ 1.1
RBM39-219ENST00000453310 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
RBM39-219ENST00000453310 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
RBM39-219ENST00000453310 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
RBM39-219ENST00000453310 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
RBM39-219ENST00000453310 FOXO3O43524 673 aa21.92■■□□□ 1.1
RBM39-219ENST00000453310 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
RBM39-219ENST00000453310 PXDNQ92626 1479 aa21.9■■□□□ 1.1
RBM39-219ENST00000453310 PLEKHG3A1L390 1219 aa21.9■■□□□ 1.1
RBM39-219ENST00000453310 CDCA8Q53HL2 280 aa21.89■■□□□ 1.09
RBM39-219ENST00000453310 NGDNQ8NEJ9 315 aaKnown RBP21.89■■□□□ 1.09
RBM39-219ENST00000453310 POLR3AO14802 1390 aaPredicted RBP21.88■■□□□ 1.09
RBM39-219ENST00000453310 SOS2Q07890 1332 aaPredicted RBP21.88■■□□□ 1.09
RBM39-219ENST00000453310 CABP1Q9NZU7 370 aa21.88■■□□□ 1.09
RBM39-219ENST00000453310 ACEP12821 1306 aa21.87■■□□□ 1.09
RBM39-219ENST00000453310 XPCQ01831 940 aaPredicted RBP21.87■■□□□ 1.09
RBM39-219ENST00000453310 PSME1Q06323 249 aa21.85■■□□□ 1.09
RBM39-219ENST00000453310 KRT28Q7Z3Y7 464 aa21.85■■□□□ 1.09
RBM39-219ENST00000453310 NINLQ9Y2I6 1382 aa21.85■■□□□ 1.09
RBM39-219ENST00000453310 TMC1Q8TDI8 760 aa21.84■■□□□ 1.09
RBM39-219ENST00000453310 AKAP12Q02952 1782 aa21.84■■□□□ 1.09
RBM39-219ENST00000453310 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.09
RBM39-219ENST00000453310 MYOM1P52179 1685 aa21.82■■□□□ 1.08
RBM39-219ENST00000453310 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
RBM39-219ENST00000453310 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
RBM39-219ENST00000453310 LRRC59Q96AG4 307 aaKnown RBP21.81■■□□□ 1.08
RBM39-219ENST00000453310 POLR3GLQ9BT43 218 aa21.81■■□□□ 1.08
RBM39-219ENST00000453310 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
RBM39-219ENST00000453310 CD163L1Q9NR16 1453 aa21.81■■□□□ 1.08
RBM39-219ENST00000453310 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
RBM39-219ENST00000453310 SHPRHQ149N8 1683 aa21.8■■□□□ 1.08
RBM39-219ENST00000453310 JCADQ9P266 1359 aa21.8■■□□□ 1.08
RBM39-219ENST00000453310 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
RBM39-219ENST00000453310 USP6P35125 1406 aa21.8■■□□□ 1.08
RBM39-219ENST00000453310 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
RBM39-219ENST00000453310 KIF7Q2M1P5 1343 aa21.78■■□□□ 1.08
RBM39-219ENST00000453310 SPATA31A3Q5VYP0 1347 aa21.78■■□□□ 1.08
RBM39-219ENST00000453310 A0A1W2PP64 1363 aa21.77■■□□□ 1.08
RBM39-219ENST00000453310 ALS2Q96Q42 1657 aa21.77■■□□□ 1.08
RBM39-219ENST00000453310 HDGFL2Q7Z4V5 671 aaPredicted RBP21.77■■□□□ 1.08
RBM39-219ENST00000453310 ZNF692Q9BU19 519 aaPredicted RBP21.77■■□□□ 1.08
RBM39-219ENST00000453310 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms