RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 NPHP3Q7Z494 1330 aa13.28□□□□□ -0.28
LINC00963-206ENST00000453213 GLI3P10071 1580 aa13.26□□□□□ -0.29
LINC00963-206ENST00000453213 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
LINC00963-206ENST00000453213 APLP2Q06481 763 aa13.25□□□□□ -0.29
LINC00963-206ENST00000453213 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
LINC00963-206ENST00000453213 E9PCH4 1651 aa13.24□□□□□ -0.29
LINC00963-206ENST00000453213 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
LINC00963-206ENST00000453213 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
LINC00963-206ENST00000453213 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
LINC00963-206ENST00000453213 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
LINC00963-206ENST00000453213 SLIT2O94813 1529 aa13.23□□□□□ -0.29
LINC00963-206ENST00000453213 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
LINC00963-206ENST00000453213 MARF1Q9Y4F3 1742 aaKnown RBP13.22□□□□□ -0.29
LINC00963-206ENST00000453213 IQGAP3Q86VI3 1631 aa13.22□□□□□ -0.29
LINC00963-206ENST00000453213 FOXO3O43524 673 aa13.22□□□□□ -0.29
LINC00963-206ENST00000453213 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
LINC00963-206ENST00000453213 VPS72Q15906 364 aa13.22□□□□□ -0.29
LINC00963-206ENST00000453213 PXDNQ92626 1479 aa13.22□□□□□ -0.29
LINC00963-206ENST00000453213 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.29
LINC00963-206ENST00000453213 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
LINC00963-206ENST00000453213 A0A0G2JS52 829 aa13.21□□□□□ -0.29
LINC00963-206ENST00000453213 MYT1Q01538 1121 aa13.21□□□□□ -0.29
LINC00963-206ENST00000453213 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-206ENST00000453213 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-206ENST00000453213 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-206ENST00000453213 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
LINC00963-206ENST00000453213 NUP155O75694 1391 aa13.19□□□□□ -0.3
LINC00963-206ENST00000453213 HFM1A2PYH4 1435 aa13.18□□□□□ -0.3
LINC00963-206ENST00000453213 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
LINC00963-206ENST00000453213 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
LINC00963-206ENST00000453213 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
LINC00963-206ENST00000453213 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
LINC00963-206ENST00000453213 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
LINC00963-206ENST00000453213 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-206ENST00000453213 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
LINC00963-206ENST00000453213 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
LINC00963-206ENST00000453213 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
LINC00963-206ENST00000453213 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
LINC00963-206ENST00000453213 EZH2Q15910 746 aaKnown RBP13.12□□□□□ -0.31
LINC00963-206ENST00000453213 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
LINC00963-206ENST00000453213 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
LINC00963-206ENST00000453213 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-206ENST00000453213 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
LINC00963-206ENST00000453213 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
LINC00963-206ENST00000453213 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
LINC00963-206ENST00000453213 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
LINC00963-206ENST00000453213 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
LINC00963-206ENST00000453213 NAIPQ13075 1403 aa13.1□□□□□ -0.31
LINC00963-206ENST00000453213 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
LINC00963-206ENST00000453213 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
LINC00963-206ENST00000453213 PSME1Q06323 249 aa13.09□□□□□ -0.31
LINC00963-206ENST00000453213 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
LINC00963-206ENST00000453213 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
LINC00963-206ENST00000453213 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
LINC00963-206ENST00000453213 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
LINC00963-206ENST00000453213 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
LINC00963-206ENST00000453213 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
LINC00963-206ENST00000453213 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
LINC00963-206ENST00000453213 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 SPON1Q9HCB6 807 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
LINC00963-206ENST00000453213 TRIM37O94972 964 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 APBA3O96018 575 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 BTG4Q9NY30 223 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 STK26Q9P289 416 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 ADGRB2O60241 1585 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 RPGRIP1LQ68CZ1 1315 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
LINC00963-206ENST00000453213 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-206ENST00000453213 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
LINC00963-206ENST00000453213 KCNQ2O43526 872 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
LINC00963-206ENST00000453213 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.32
LINC00963-206ENST00000453213 ITGAEP38570 1179 aa13□□□□□ -0.33
LINC00963-206ENST00000453213 KIF1BO60333 1816 aa12.99□□□□□ -0.33
LINC00963-206ENST00000453213 TECPR2O15040 1411 aa12.99□□□□□ -0.33
LINC00963-206ENST00000453213 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
LINC00963-206ENST00000453213 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
LINC00963-206ENST00000453213 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
LINC00963-206ENST00000453213 FMN2Q9NZ56 1722 aa12.98□□□□□ -0.33
LINC00963-206ENST00000453213 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
LINC00963-206ENST00000453213 ABCA3Q99758 1704 aa12.97□□□□□ -0.33
LINC00963-206ENST00000453213 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
LINC00963-206ENST00000453213 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.34
LINC00963-206ENST00000453213 NRXN1Q9ULB1 1477 aa12.96□□□□□ -0.34
LINC00963-206ENST00000453213 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
LINC00963-206ENST00000453213 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
LINC00963-206ENST00000453213 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
LINC00963-206ENST00000453213 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
LINC00963-206ENST00000453213 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
LINC00963-206ENST00000453213 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
LINC00963-206ENST00000453213 RREB1Q92766 1687 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms