RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 JCADQ9P266 1359 aa27.38■■□□□ 1.97
HIGD1A-204ENST00000452906 PIK3C2GO75747 1445 aa27.36■■□□□ 1.97
HIGD1A-204ENST00000452906 NALCNQ8IZF0 1738 aa27.35■■□□□ 1.97
HIGD1A-204ENST00000452906 ADGRL3Q9HAR2 1447 aa27.34■■□□□ 1.97
HIGD1A-204ENST00000452906 PTCH1Q13635 1447 aa27.33■■□□□ 1.97
HIGD1A-204ENST00000452906 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
HIGD1A-204ENST00000452906 SHPRHQ149N8 1683 aa27.32■■□□□ 1.96
HIGD1A-204ENST00000452906 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
HIGD1A-204ENST00000452906 RGS17Q9UGC6 210 aaPredicted RBP27.31■■□□□ 1.96
HIGD1A-204ENST00000452906 ADGRF5Q8IZF2 1346 aa27.31■■□□□ 1.96
HIGD1A-204ENST00000452906 MST1RQ04912 1400 aa27.31■■□□□ 1.96
HIGD1A-204ENST00000452906 ASXL1Q8IXJ9 1541 aa27.29■■□□□ 1.96
HIGD1A-204ENST00000452906 NHSL1Q5SYE7 1610 aa27.29■■□□□ 1.96
HIGD1A-204ENST00000452906 NBPF1Q3BBV0 1214 aa27.28■■□□□ 1.96
HIGD1A-204ENST00000452906 BRINP3Q76B58 766 aa27.28■■□□□ 1.96
HIGD1A-204ENST00000452906 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
HIGD1A-204ENST00000452906 SLC24A1O60721 1099 aa27.25■■□□□ 1.95
HIGD1A-204ENST00000452906 CCDC7Q96M83 1385 aa27.24■■□□□ 1.95
HIGD1A-204ENST00000452906 C14orf93Q9H972 538 aaKnown RBP27.23■■□□□ 1.95
HIGD1A-204ENST00000452906 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
HIGD1A-204ENST00000452906 ST20-MTHFSA0A0A6YYL1 179 aa27.21■■□□□ 1.95
HIGD1A-204ENST00000452906 WASHC2AQ641Q2 1341 aa27.2■■□□□ 1.95
HIGD1A-204ENST00000452906 CFAP70Q5T0N1 1121 aa27.2■■□□□ 1.94
HIGD1A-204ENST00000452906 ADGRB1O14514 1584 aa27.19■■□□□ 1.94
HIGD1A-204ENST00000452906 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
HIGD1A-204ENST00000452906 LRP6O75581 1613 aa27.18■■□□□ 1.94
HIGD1A-204ENST00000452906 KNDC1Q76NI1 1749 aa27.16■■□□□ 1.94
HIGD1A-204ENST00000452906 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
HIGD1A-204ENST00000452906 C1orf167Q5SNV9 1468 aa27.15■■□□□ 1.94
HIGD1A-204ENST00000452906 POTEAQ6S8J7 498 aa27.15■■□□□ 1.94
HIGD1A-204ENST00000452906 TECPR2O15040 1411 aa27.13■■□□□ 1.93
HIGD1A-204ENST00000452906 CDC42BPGQ6DT37 1551 aa27.13■■□□□ 1.93
HIGD1A-204ENST00000452906 TMF1P82094 1093 aa27.11■■□□□ 1.93
HIGD1A-204ENST00000452906 CDCA8Q53HL2 280 aa27.11■■□□□ 1.93
HIGD1A-204ENST00000452906 MEX3CQ5U5Q3 659 aaKnown RBP27.11■■□□□ 1.93
HIGD1A-204ENST00000452906 LRRC59Q96AG4 307 aaKnown RBP27.11■■□□□ 1.93
HIGD1A-204ENST00000452906 SBNO2Q9Y2G9 1366 aa27.1■■□□□ 1.93
HIGD1A-204ENST00000452906 ARHGEF28Q8N1W1 1705 aaKnown RBP27.09■■□□□ 1.93
HIGD1A-204ENST00000452906 LRPPRCP42704 1394 aaKnown RBP27.09■■□□□ 1.93
HIGD1A-204ENST00000452906 C11orf95C9JLR9 678 aaPredicted RBP27.07■■□□□ 1.92
HIGD1A-204ENST00000452906 QRICH2Q9H0J4 1663 aa27.07■■□□□ 1.92
HIGD1A-204ENST00000452906 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
HIGD1A-204ENST00000452906 ZNF772Q68DY9 489 aaPredicted RBP27.06■■□□□ 1.92
HIGD1A-204ENST00000452906 TESK2Q96S53 571 aa27.06■■□□□ 1.92
HIGD1A-204ENST00000452906 PNPLA6Q8IY17 1366 aa27.03■■□□□ 1.92
HIGD1A-204ENST00000452906 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
HIGD1A-204ENST00000452906 YTHDC2Q9H6S0 1430 aaKnown RBP27.01■■□□□ 1.91
HIGD1A-204ENST00000452906 DDX17Q92841 729 aaKnown RBP27.01■■□□□ 1.91
HIGD1A-204ENST00000452906 SOS2Q07890 1332 aaPredicted RBP27■■□□□ 1.91
HIGD1A-204ENST00000452906 NUTM2BA6NNL0 878 aaPredicted RBP27■■□□□ 1.91
HIGD1A-204ENST00000452906 NUTM2EB1AL46 878 aaPredicted RBP27■■□□□ 1.91
HIGD1A-204ENST00000452906 ANP32CO43423 234 aa27■■□□□ 1.91
HIGD1A-204ENST00000452906 NUTM2AQ8IVF1 878 aaPredicted RBP27■■□□□ 1.91
HIGD1A-204ENST00000452906 MIER1Q8N108 512 aa27■■□□□ 1.91
HIGD1A-204ENST00000452906 ORAI2Q96SN7 254 aa27■■□□□ 1.91
HIGD1A-204ENST00000452906 STK26Q9P289 416 aa27■■□□□ 1.91
HIGD1A-204ENST00000452906 DLC1Q96QB1 1528 aa27■■□□□ 1.91
HIGD1A-204ENST00000452906 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
HIGD1A-204ENST00000452906 FMN2Q9NZ56 1722 aa26.98■■□□□ 1.91
HIGD1A-204ENST00000452906 SIRT1Q96EB6 747 aa26.96■■□□□ 1.91
HIGD1A-204ENST00000452906 POLR3GLQ9BT43 218 aa26.96■■□□□ 1.91
HIGD1A-204ENST00000452906 TRAK1Q9UPV9 953 aa26.96■■□□□ 1.91
HIGD1A-204ENST00000452906 COL22A1Q8NFW1 1626 aaPredicted RBP26.96■■□□□ 1.91
HIGD1A-204ENST00000452906 WAPLQ7Z5K2 1190 aa26.95■■□□□ 1.9
HIGD1A-204ENST00000452906 NPHP3Q7Z494 1330 aa26.93■■□□□ 1.9
HIGD1A-204ENST00000452906 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
HIGD1A-204ENST00000452906 ESCO1Q5FWF5 840 aa26.92■■□□□ 1.9
HIGD1A-204ENST00000452906 PLEKHH1Q9ULM0 1364 aa26.92■■□□□ 1.9
HIGD1A-204ENST00000452906 AFF2P51816 1311 aa26.9■■□□□ 1.9
HIGD1A-204ENST00000452906 PXDNQ92626 1479 aa26.9■■□□□ 1.9
HIGD1A-204ENST00000452906 CDK12Q9NYV4 1490 aaPredicted RBP26.9■■□□□ 1.9
HIGD1A-204ENST00000452906 PUS7Q96PZ0 661 aaKnown RBP26.88■■□□□ 1.89
HIGD1A-204ENST00000452906 RXRBP28702 533 aa26.87■■□□□ 1.89
HIGD1A-204ENST00000452906 C8orf37Q96NL8 207 aa26.87■■□□□ 1.89
HIGD1A-204ENST00000452906 RGPD8O14715 1765 aaPredicted RBP26.86■■□□□ 1.89
HIGD1A-204ENST00000452906 MYOM1P52179 1685 aa26.85■■□□□ 1.89
HIGD1A-204ENST00000452906 MARF1Q9Y4F3 1742 aaKnown RBP26.85■■□□□ 1.89
HIGD1A-204ENST00000452906 EVC2Q86UK5 1308 aa26.85■■□□□ 1.89
HIGD1A-204ENST00000452906 CCER2I3L3R5 266 aa26.83■■□□□ 1.89
HIGD1A-204ENST00000452906 FOXO3O43524 673 aa26.83■■□□□ 1.89
HIGD1A-204ENST00000452906 POGKQ9P215 609 aa26.83■■□□□ 1.89
HIGD1A-204ENST00000452906 KTN1Q86UP2 1357 aaKnown RBP26.83■■□□□ 1.88
HIGD1A-204ENST00000452906 ADGRB2O60241 1585 aa26.82■■□□□ 1.88
HIGD1A-204ENST00000452906 ADAMTS2O95450 1211 aa26.81■■□□□ 1.88
HIGD1A-204ENST00000452906 NUTM2FA1L443 756 aa26.8■■□□□ 1.88
HIGD1A-204ENST00000452906 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
HIGD1A-204ENST00000452906 PRAM1Q96QH2 718 aa26.79■■□□□ 1.88
HIGD1A-204ENST00000452906 TULP4Q9NRJ4 1543 aa26.79■■□□□ 1.88
HIGD1A-204ENST00000452906 NINLQ9Y2I6 1382 aa26.77■■□□□ 1.88
HIGD1A-204ENST00000452906 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
HIGD1A-204ENST00000452906 QTRT2Q9H974 415 aaKnown RBP26.77■■□□□ 1.88
HIGD1A-204ENST00000452906 ANKARQ7Z5J8 1434 aa26.75■■□□□ 1.87
HIGD1A-204ENST00000452906 XPCQ01831 940 aaPredicted RBP26.75■■□□□ 1.87
HIGD1A-204ENST00000452906 FNBP4Q8N3X1 1017 aaPredicted RBP26.74■■□□□ 1.87
HIGD1A-204ENST00000452906 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
HIGD1A-204ENST00000452906 USP32Q8NFA0 1604 aa26.73■■□□□ 1.87
HIGD1A-204ENST00000452906 SAFB2Q14151 953 aaKnown RBP eCLIP26.73■■□□□ 1.87
HIGD1A-204ENST00000452906 PRKRIP1Q9H875 184 aaPredicted RBP26.73■■□□□ 1.87
HIGD1A-204ENST00000452906 SPATA31A3Q5VYP0 1347 aa26.72■■□□□ 1.87
HIGD1A-204ENST00000452906 USP21Q9UK80 565 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms