RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 PPLO60437 1756 aa17.61■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 UPF1Q92900 1129 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 ADGRF5Q8IZF2 1346 aa17.6■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
CHKB-CPT1B-201ENST00000452668 USP21Q9UK80 565 aa17.57■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 FOXO3O43524 673 aa17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 LAMC1P11047 1609 aa17.52■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 TECPR2O15040 1411 aa17.52■□□□□ 0.4
CHKB-CPT1B-201ENST00000452668 DHX57Q6P158 1386 aaKnown RBP17.52■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 RGS12O14924 1447 aa17.49■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 PSME1Q06323 249 aa17.48■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 C14orf93Q9H972 538 aaKnown RBP17.48■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 POGKQ9P215 609 aa17.48■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
CHKB-CPT1B-201ENST00000452668 PXDNQ92626 1479 aa17.45■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 IFT172Q9UG01 1749 aa17.45■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 COL22A1Q8NFW1 1626 aaPredicted RBP17.45■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 MYOM2P54296 1465 aa17.44■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 ATRNO75882 1429 aa17.42■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 KDM2AQ9Y2K7 1162 aa17.4■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
CHKB-CPT1B-201ENST00000452668 UNC5CLQ8IV45 518 aa17.39■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 CCDC125Q86Z20 511 aa17.38■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 ARHGEF10O15013 1369 aa17.37■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 MARF1Q9Y4F3 1742 aaKnown RBP17.34■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 DLC1Q96QB1 1528 aa17.33■□□□□ 0.37
CHKB-CPT1B-201ENST00000452668 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 A0A0G2JS52 829 aa17.32■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 HRCP23327 699 aa17.32■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 MYT1Q01538 1121 aa17.32■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 NGDNQ8NEJ9 315 aaKnown RBP17.31■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 SLIT2O94813 1529 aa17.31■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 VPS72Q15906 364 aa17.3■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.28■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
CHKB-CPT1B-201ENST00000452668 RGPD8O14715 1765 aaPredicted RBP17.27■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 GLI3P10071 1580 aa17.22■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
CHKB-CPT1B-201ENST00000452668 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 FAM98CQ17RN3 349 aaKnown RBP17.2■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
CHKB-CPT1B-201ENST00000452668 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms