RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-209ENST00000452660 WNT7AO00755 349 aa6.6□□□□□ -1.35
LRCH3-209ENST00000452660 DXOO77932 396 aaKnown RBP6.6□□□□□ -1.35
LRCH3-209ENST00000452660 USB1Q9BQ65 265 aaKnown RBP6.6□□□□□ -1.35
LRCH3-209ENST00000452660 RNF19BQ6ZMZ0 732 aa6.59□□□□□ -1.35
LRCH3-209ENST00000452660 CYP4X1Q8N118 509 aa6.59□□□□□ -1.35
LRCH3-209ENST00000452660 NLRP7Q8WX94 980 aa6.59□□□□□ -1.35
LRCH3-209ENST00000452660 REPIN1Q9BWE0 567 aaKnown RBP6.59□□□□□ -1.35
LRCH3-209ENST00000452660 GPCPD1Q9NPB8 672 aa6.59□□□□□ -1.35
LRCH3-209ENST00000452660 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
LRCH3-209ENST00000452660 HOXA2O43364 376 aa6.58□□□□□ -1.36
LRCH3-209ENST00000452660 ZNF775Q96BV0 537 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-209ENST00000452660 FOXC1Q12948 553 aa6.57□□□□□ -1.36
LRCH3-209ENST00000452660 TRIM32Q13049 653 aa6.57□□□□□ -1.36
LRCH3-209ENST00000452660 PRDM9Q9NQV7 894 aa6.57□□□□□ -1.36
LRCH3-209ENST00000452660 WNT7BP56706 349 aa6.56□□□□□ -1.36
LRCH3-209ENST00000452660 MDM2Q00987 491 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-209ENST00000452660 SNIP1Q8TAD8 396 aaKnown RBP6.56□□□□□ -1.36
LRCH3-209ENST00000452660 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
LRCH3-209ENST00000452660 FAM217BQ9NTX9 383 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-209ENST00000452660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.55□□□□□ -1.36
LRCH3-209ENST00000452660 AXIN1O15169 862 aa6.54□□□□□ -1.36
LRCH3-209ENST00000452660 JUNDP17535 347 aa6.53□□□□□ -1.36
LRCH3-209ENST00000452660 RETREG3Q86VR2 466 aa6.53□□□□□ -1.36
LRCH3-209ENST00000452660 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
LRCH3-209ENST00000452660 TTC24A2A3L6 582 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-209ENST00000452660 GJA5P36382 358 aa6.52□□□□□ -1.37
LRCH3-209ENST00000452660 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 SMPD1P17405 629 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 AMHR2Q16671 573 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 BARGINQ6ZT62 677 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 KRI1Q8N9T8 703 aaKnown RBP6.51□□□□□ -1.37
LRCH3-209ENST00000452660 MRGPRX2Q96LB1 330 aa6.51□□□□□ -1.37
LRCH3-209ENST00000452660 SPDYE5A6NIY4 337 aa6.5□□□□□ -1.37
LRCH3-209ENST00000452660 POTECB2RU33 542 aa6.5□□□□□ -1.37
LRCH3-209ENST00000452660 DIXDC1Q155Q3 683 aa6.5□□□□□ -1.37
LRCH3-209ENST00000452660 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-209ENST00000452660 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
LRCH3-209ENST00000452660 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
LRCH3-209ENST00000452660 ZMYND10O75800 440 aa6.48□□□□□ -1.37
LRCH3-209ENST00000452660 FDX1P10109 184 aa6.48□□□□□ -1.37
LRCH3-209ENST00000452660 RC3H1Q5TC82 1133 aaKnown RBP6.48□□□□□ -1.37
LRCH3-209ENST00000452660 KIFC2Q96AC6 838 aa6.48□□□□□ -1.37
LRCH3-209ENST00000452660 SSTR3P32745 418 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-209ENST00000452660 PTPRNQ16849 979 aa6.47□□□□□ -1.37
LRCH3-209ENST00000452660 MPNDQ8N594 471 aa6.47□□□□□ -1.37
LRCH3-209ENST00000452660 NUDT12Q9BQG2 462 aa6.47□□□□□ -1.37
LRCH3-209ENST00000452660 C11orf95C9JLR9 678 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-209ENST00000452660 SKOR1P84550 965 aa6.46□□□□□ -1.38
LRCH3-209ENST00000452660 CCDC24Q8N4L8 307 aa6.46□□□□□ -1.38
LRCH3-209ENST00000452660 SPIRE2Q8WWL2 714 aa6.46□□□□□ -1.38
LRCH3-209ENST00000452660 HLA-CQ95604 372 aa6.46□□□□□ -1.38
LRCH3-209ENST00000452660 ATP13A2Q9NQ11 1180 aa6.46□□□□□ -1.38
LRCH3-209ENST00000452660 GMPR2Q9P2T1 348 aaKnown RBP6.46□□□□□ -1.38
LRCH3-209ENST00000452660 CCNYL3P0C7X3 344 aa6.45□□□□□ -1.38
LRCH3-209ENST00000452660 MS4A1P11836 297 aa6.45□□□□□ -1.38
LRCH3-209ENST00000452660 TRIM47Q96LD4 638 aa6.45□□□□□ -1.38
LRCH3-209ENST00000452660 DACH1Q9UI36 760 aa6.45□□□□□ -1.38
LRCH3-209ENST00000452660 SIAH2O43255 324 aa6.44□□□□□ -1.38
LRCH3-209ENST00000452660 EVA1BQ9NVM1 165 aa6.44□□□□□ -1.38
LRCH3-209ENST00000452660 PCDHGC3Q9UN70 934 aa6.44□□□□□ -1.38
LRCH3-209ENST00000452660 C6orf229H3BNL8 230 aa6.43□□□□□ -1.38
LRCH3-209ENST00000452660 J3QL48 77 aa6.43□□□□□ -1.38
LRCH3-209ENST00000452660 WIPF1O43516 503 aa6.43□□□□□ -1.38
LRCH3-209ENST00000452660 GUCA2AQ02747 115 aa6.43□□□□□ -1.38
LRCH3-209ENST00000452660 WFS1O76024 890 aa6.42□□□□□ -1.38
LRCH3-209ENST00000452660 KCNH2Q12809 1159 aa6.42□□□□□ -1.38
LRCH3-209ENST00000452660 MTMR2Q13614 643 aa6.42□□□□□ -1.38
LRCH3-209ENST00000452660 TTLL12Q14166 644 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-209ENST00000452660 GIGYF2Q6Y7W6 1299 aaKnown RBP6.42□□□□□ -1.38
LRCH3-209ENST00000452660 ZC3H15Q8WU90 426 aaKnown RBP6.42□□□□□ -1.38
LRCH3-209ENST00000452660 SYMPKQ92797 1274 aaKnown RBP6.42□□□□□ -1.38
LRCH3-209ENST00000452660 PLEKHG3A1L390 1219 aa6.41□□□□□ -1.38
LRCH3-209ENST00000452660 NFX1Q12986 1120 aaKnown RBP6.41□□□□□ -1.38
LRCH3-209ENST00000452660 PRPF38BQ5VTL8 546 aaKnown RBP6.41□□□□□ -1.38
LRCH3-209ENST00000452660 PTCRAQ6ISU1 281 aaPredicted RBP6.41□□□□□ -1.38
LRCH3-209ENST00000452660 NPAS3Q8IXF0 933 aa6.41□□□□□ -1.38
LRCH3-209ENST00000452660 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
LRCH3-209ENST00000452660 HPS1Q92902 700 aa6.41□□□□□ -1.38
LRCH3-209ENST00000452660 MOXD2PA6NHM9 499 aa6.4□□□□□ -1.38
LRCH3-209ENST00000452660 VARSP26640 1264 aaKnown RBP6.4□□□□□ -1.38
LRCH3-209ENST00000452660 SH3BP2P78314 561 aa6.4□□□□□ -1.38
LRCH3-209ENST00000452660 TUSC1Q2TAM9 212 aa6.4□□□□□ -1.38
LRCH3-209ENST00000452660 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
LRCH3-209ENST00000452660 UNC93B1Q9H1C4 597 aa6.4□□□□□ -1.38
LRCH3-209ENST00000452660 SPTLC1O15269 473 aa6.39□□□□□ -1.39
LRCH3-209ENST00000452660 ALDH1A1P00352 501 aa6.39□□□□□ -1.39
LRCH3-209ENST00000452660 RSBN1LQ6PCB5 846 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-209ENST00000452660 BEGAINQ9BUH8 593 aa6.39□□□□□ -1.39
LRCH3-209ENST00000452660 TERTO14746 1132 aaKnown RBP6.38□□□□□ -1.39
LRCH3-209ENST00000452660 INSM1Q01101 510 aaPredicted RBP6.38□□□□□ -1.39
LRCH3-209ENST00000452660 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
LRCH3-209ENST00000452660 AK7Q96M32 723 aa6.38□□□□□ -1.39
LRCH3-209ENST00000452660 NDUFV2P19404 249 aa6.37□□□□□ -1.39
LRCH3-209ENST00000452660 ZNF511Q8NB15 262 aa6.37□□□□□ -1.39
LRCH3-209ENST00000452660 TBC1D2Q9BYX2 928 aa6.37□□□□□ -1.39
LRCH3-209ENST00000452660 STK17AQ9UEE5 414 aa6.37□□□□□ -1.39
LRCH3-209ENST00000452660 WASF2Q9Y6W5 498 aa6.37□□□□□ -1.39
LRCH3-209ENST00000452660 TRIM66O15016 1216 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms