RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 LOC105371045A0A1W2PR82 267 aa10.73□□□□□ -0.69
PIKFYVE-207ENST00000452564 PIK3C2GO75747 1445 aa10.72□□□□□ -0.69
PIKFYVE-207ENST00000452564 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
PIKFYVE-207ENST00000452564 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
PIKFYVE-207ENST00000452564 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.69
PIKFYVE-207ENST00000452564 PEAK1Q9H792 1746 aa10.71□□□□□ -0.7
PIKFYVE-207ENST00000452564 COL24A1Q17RW2 1714 aa10.7□□□□□ -0.7
PIKFYVE-207ENST00000452564 NUP188Q5SRE5 1749 aa10.7□□□□□ -0.7
PIKFYVE-207ENST00000452564 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
PIKFYVE-207ENST00000452564 AFF2P51816 1311 aa10.69□□□□□ -0.7
PIKFYVE-207ENST00000452564 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
PIKFYVE-207ENST00000452564 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
PIKFYVE-207ENST00000452564 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
PIKFYVE-207ENST00000452564 ARHGEF28Q8N1W1 1705 aaKnown RBP10.68□□□□□ -0.7
PIKFYVE-207ENST00000452564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.76e-7■■□□□ 12.6
PIKFYVE-207ENST00000452564 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 RXRBP28702 533 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 ITSN1Q15811 1721 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 KIAA1210Q9ULL0 1709 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 CASZ1Q86V15 1759 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 RALGAPBQ86X10 1494 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
PIKFYVE-207ENST00000452564 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
PIKFYVE-207ENST00000452564 NUP155O75694 1391 aa10.65□□□□□ -0.7
PIKFYVE-207ENST00000452564 RBM6P78332 1123 aaKnown RBP10.65□□□□□ -0.7
PIKFYVE-207ENST00000452564 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
PIKFYVE-207ENST00000452564 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
PIKFYVE-207ENST00000452564 LRRC59Q96AG4 307 aaKnown RBP10.64□□□□□ -0.71
PIKFYVE-207ENST00000452564 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
PIKFYVE-207ENST00000452564 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
PIKFYVE-207ENST00000452564 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
PIKFYVE-207ENST00000452564 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
PIKFYVE-207ENST00000452564 NRKQ7Z2Y5 1582 aa10.61□□□□□ -0.71
PIKFYVE-207ENST00000452564 COL18A1P39060 1754 aa10.61□□□□□ -0.71
PIKFYVE-207ENST00000452564 ATF3P18847 181 aa10.6□□□□□ -0.71
PIKFYVE-207ENST00000452564 ANKARQ7Z5J8 1434 aa10.6□□□□□ -0.71
PIKFYVE-207ENST00000452564 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
PIKFYVE-207ENST00000452564 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
PIKFYVE-207ENST00000452564 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
PIKFYVE-207ENST00000452564 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
PIKFYVE-207ENST00000452564 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
PIKFYVE-207ENST00000452564 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
PIKFYVE-207ENST00000452564 QSER1Q2KHR3 1735 aa10.57□□□□□ -0.72
PIKFYVE-207ENST00000452564 SRCAPQ6ZRS2 3230 aa10.57□□□□□ -0.72
PIKFYVE-207ENST00000452564 TULP4Q9NRJ4 1543 aa10.57□□□□□ -0.72
PIKFYVE-207ENST00000452564 QTRT2Q9H974 415 aaKnown RBP10.57□□□□□ -0.72
PIKFYVE-207ENST00000452564 CCDC144AA2RUR9 1427 aa10.57□□□□□ -0.72
PIKFYVE-207ENST00000452564 PLEKHH1Q9ULM0 1364 aa10.56□□□□□ -0.72
PIKFYVE-207ENST00000452564 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
PIKFYVE-207ENST00000452564 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
PIKFYVE-207ENST00000452564 ORAI2Q96SN7 254 aa10.56□□□□□ -0.72
PIKFYVE-207ENST00000452564 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
PIKFYVE-207ENST00000452564 PPP1R15AO75807 674 aaPredicted RBP10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 LRRC37A3O60309 1634 aa10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 PAPPAQ13219 1627 aa10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 TRIM52Q96A61 297 aa10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 TRPC5Q9UL62 973 aaPredicted RBP10.54□□□□□ -0.72
PIKFYVE-207ENST00000452564 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
PIKFYVE-207ENST00000452564 AKAP12Q02952 1782 aa10.52□□□□□ -0.72
PIKFYVE-207ENST00000452564 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.72
PIKFYVE-207ENST00000452564 ADGRF5Q8IZF2 1346 aa10.51□□□□□ -0.73
PIKFYVE-207ENST00000452564 ATP7BP35670 1465 aa10.51□□□□□ -0.73
PIKFYVE-207ENST00000452564 GJD4Q96KN9 370 aaPredicted RBP10.51□□□□□ -0.73
PIKFYVE-207ENST00000452564 SLIT3O75094 1523 aa10.51□□□□□ -0.73
PIKFYVE-207ENST00000452564 NPHP3Q7Z494 1330 aa10.5□□□□□ -0.73
PIKFYVE-207ENST00000452564 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
PIKFYVE-207ENST00000452564 USP21Q9UK80 565 aa10.5□□□□□ -0.73
PIKFYVE-207ENST00000452564 VPS72Q15906 364 aa10.5□□□□□ -0.73
PIKFYVE-207ENST00000452564 MEX3CQ5U5Q3 659 aaKnown RBP10.49□□□□□ -0.73
PIKFYVE-207ENST00000452564 C8orf37Q96NL8 207 aa10.49□□□□□ -0.73
PIKFYVE-207ENST00000452564 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
PIKFYVE-207ENST00000452564 ABCC6O95255 1503 aa10.48□□□□□ -0.73
PIKFYVE-207ENST00000452564 FAM50AQ14320 339 aaKnown RBP10.48□□□□□ -0.73
PIKFYVE-207ENST00000452564 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
PIKFYVE-207ENST00000452564 C14orf93Q9H972 538 aaKnown RBP10.47□□□□□ -0.73
PIKFYVE-207ENST00000452564 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
PIKFYVE-207ENST00000452564 BCL9O00512 1426 aa10.47□□□□□ -0.73
PIKFYVE-207ENST00000452564 QRICH2Q9H0J4 1663 aa10.46□□□□□ -0.74
PIKFYVE-207ENST00000452564 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
PIKFYVE-207ENST00000452564 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
PIKFYVE-207ENST00000452564 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
PIKFYVE-207ENST00000452564 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
PIKFYVE-207ENST00000452564 MON2Q7Z3U7 1717 aa10.45□□□□□ -0.74
PIKFYVE-207ENST00000452564 ARHGEF10O15013 1369 aa10.44□□□□□ -0.74
PIKFYVE-207ENST00000452564 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
PIKFYVE-207ENST00000452564 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
PIKFYVE-207ENST00000452564 SSH2Q76I76 1423 aa10.44□□□□□ -0.74
PIKFYVE-207ENST00000452564 TUBGCP6Q96RT7 1819 aa10.43□□□□□ -0.74
PIKFYVE-207ENST00000452564 RGPD5Q99666 1765 aa10.42□□□□□ -0.74
PIKFYVE-207ENST00000452564 CAMTA1Q9Y6Y1 1673 aa10.42□□□□□ -0.74
PIKFYVE-207ENST00000452564 MYOM1P52179 1685 aa10.42□□□□□ -0.74
PIKFYVE-207ENST00000452564 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
PIKFYVE-207ENST00000452564 SPATA31A5Q5VU36 1347 aa10.41□□□□□ -0.74
PIKFYVE-207ENST00000452564 SPATA31A7Q8IWB4 1347 aa10.41□□□□□ -0.74
PIKFYVE-207ENST00000452564 PARD3Q8TEW0 1356 aa10.41□□□□□ -0.74
PIKFYVE-207ENST00000452564 CPDO75976 1380 aa10.4□□□□□ -0.74
PIKFYVE-207ENST00000452564 DHX57Q6P158 1386 aaKnown RBP10.4□□□□□ -0.75
PIKFYVE-207ENST00000452564 APLP2Q06481 763 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms