RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
CCHCR1-208ENST00000451521 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
CCHCR1-208ENST00000451521 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
CCHCR1-208ENST00000451521 PTPRMP28827 1452 aa20.36■□□□□ 0.85
CCHCR1-208ENST00000451521 DNAJC5Q9H3Z4 198 aa20.36■□□□□ 0.85
CCHCR1-208ENST00000451521 SAFB2Q14151 953 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCHCR1-208ENST00000451521 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
CCHCR1-208ENST00000451521 ZMYM3Q14202 1370 aa20.33■□□□□ 0.85
CCHCR1-208ENST00000451521 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
CCHCR1-208ENST00000451521 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.84
CCHCR1-208ENST00000451521 STK26Q9P289 416 aa20.33■□□□□ 0.84
CCHCR1-208ENST00000451521 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.84
CCHCR1-208ENST00000451521 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
CCHCR1-208ENST00000451521 RIMS2Q9UQ26 1411 aa20.31■□□□□ 0.84
CCHCR1-208ENST00000451521 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
CCHCR1-208ENST00000451521 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCHCR1-208ENST00000451521 ANKRD36BQ8N2N9 1353 aa20.29■□□□□ 0.84
CCHCR1-208ENST00000451521 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-208ENST00000451521 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
CCHCR1-208ENST00000451521 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
CCHCR1-208ENST00000451521 DLC1Q96QB1 1528 aa20.28■□□□□ 0.84
CCHCR1-208ENST00000451521 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
CCHCR1-208ENST00000451521 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
CCHCR1-208ENST00000451521 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
CCHCR1-208ENST00000451521 CABP2Q9NPB3 220 aa20.24■□□□□ 0.83
CCHCR1-208ENST00000451521 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
CCHCR1-208ENST00000451521 NSD2O96028 1365 aa20.23■□□□□ 0.83
CCHCR1-208ENST00000451521 NBR1Q14596 966 aa20.23■□□□□ 0.83
CCHCR1-208ENST00000451521 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
CCHCR1-208ENST00000451521 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
CCHCR1-208ENST00000451521 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCHCR1-208ENST00000451521 TNRQ92752 1358 aa20.22■□□□□ 0.83
CCHCR1-208ENST00000451521 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
CCHCR1-208ENST00000451521 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
CCHCR1-208ENST00000451521 POGKQ9P215 609 aa20.21■□□□□ 0.83
CCHCR1-208ENST00000451521 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
CCHCR1-208ENST00000451521 ABCC11Q96J66 1382 aa20.2■□□□□ 0.82
CCHCR1-208ENST00000451521 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
CCHCR1-208ENST00000451521 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
CCHCR1-208ENST00000451521 PLEKHH1Q9ULM0 1364 aa20.19■□□□□ 0.82
CCHCR1-208ENST00000451521 RCAN3Q9UKA8 241 aa20.19■□□□□ 0.82
CCHCR1-208ENST00000451521 MINK1Q8N4C8 1332 aaPredicted RBP20.19■□□□□ 0.82
CCHCR1-208ENST00000451521 SRPK2P78362 688 aaKnown RBP20.18■□□□□ 0.82
CCHCR1-208ENST00000451521 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
CCHCR1-208ENST00000451521 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
CCHCR1-208ENST00000451521 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
CCHCR1-208ENST00000451521 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-208ENST00000451521 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
CCHCR1-208ENST00000451521 ANKRD26Q9UPS8 1709 aa20.15■□□□□ 0.82
CCHCR1-208ENST00000451521 MED14O60244 1454 aa20.14■□□□□ 0.81
CCHCR1-208ENST00000451521 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
CCHCR1-208ENST00000451521 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
CCHCR1-208ENST00000451521 CDK19Q9BWU1 502 aa20.14■□□□□ 0.81
CCHCR1-208ENST00000451521 NLRP1Q9C000 1473 aa20.13■□□□□ 0.81
CCHCR1-208ENST00000451521 METP08581 1390 aa20.13■□□□□ 0.81
CCHCR1-208ENST00000451521 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
CCHCR1-208ENST00000451521 TECPR2O15040 1411 aa20.13■□□□□ 0.81
CCHCR1-208ENST00000451521 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
CCHCR1-208ENST00000451521 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
CCHCR1-208ENST00000451521 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
CCHCR1-208ENST00000451521 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
CCHCR1-208ENST00000451521 C3P01024 1663 aa20.1■□□□□ 0.81
CCHCR1-208ENST00000451521 CPS1P31327 1500 aa20.1■□□□□ 0.81
CCHCR1-208ENST00000451521 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
CCHCR1-208ENST00000451521 FER1L4A9Z1Z3 1794 aa20.1■□□□□ 0.81
CCHCR1-208ENST00000451521 MTHFSP49914 203 aa20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 APAF1O14727 1248 aa20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 RTN4Q9NQC3 1192 aaKnown RBP20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
CCHCR1-208ENST00000451521 LTKP29376 864 aa20.08■□□□□ 0.81
CCHCR1-208ENST00000451521 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.81
CCHCR1-208ENST00000451521 ATP7BP35670 1465 aa20.08■□□□□ 0.81
CCHCR1-208ENST00000451521 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.8
CCHCR1-208ENST00000451521 KIF20BQ96Q89 1820 aa20.08■□□□□ 0.8
CCHCR1-208ENST00000451521 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
CCHCR1-208ENST00000451521 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
CCHCR1-208ENST00000451521 UBE2Q2Q8WVN8 375 aa20.07■□□□□ 0.8
CCHCR1-208ENST00000451521 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
CCHCR1-208ENST00000451521 ADAMTS13Q76LX8 1427 aa20.06■□□□□ 0.8
CCHCR1-208ENST00000451521 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
CCHCR1-208ENST00000451521 FYB1O15117 783 aa20.05■□□□□ 0.8
CCHCR1-208ENST00000451521 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
CCHCR1-208ENST00000451521 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
CCHCR1-208ENST00000451521 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
CCHCR1-208ENST00000451521 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
CCHCR1-208ENST00000451521 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
CCHCR1-208ENST00000451521 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
CCHCR1-208ENST00000451521 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
CCHCR1-208ENST00000451521 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
CCHCR1-208ENST00000451521 SLIT1O75093 1534 aa20.03■□□□□ 0.8
CCHCR1-208ENST00000451521 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
CCHCR1-208ENST00000451521 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.8
CCHCR1-208ENST00000451521 COL3A1P02461 1466 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-208ENST00000451521 CPSF1Q10570 1443 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-208ENST00000451521 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
CCHCR1-208ENST00000451521 ZBTB47Q9UFB7 747 aaPredicted RBP20■□□□□ 0.79
CCHCR1-208ENST00000451521 RIMS1Q86UR5 1692 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms