RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 STRCP1A6NGW2 1772 aa9.15□□□□□ -0.95
USP46-202ENST00000451218 TMEM132EQ6IEE7 984 aa9.14□□□□□ -0.95
USP46-202ENST00000451218 PANK3Q9H999 370 aa9.14□□□□□ -0.95
USP46-202ENST00000451218 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
USP46-202ENST00000451218 CDC42BPGQ6DT37 1551 aa9.14□□□□□ -0.95
USP46-202ENST00000451218 MYBBP1AQ9BQG0 1328 aaKnown RBP9.14□□□□□ -0.95
USP46-202ENST00000451218 CENPBP07199 599 aaPredicted RBP9.13□□□□□ -0.95
USP46-202ENST00000451218 RGPD1P0DJD0 1748 aa9.13□□□□□ -0.95
USP46-202ENST00000451218 EIF3AQ14152 1382 aaKnown RBP9.13□□□□□ -0.95
USP46-202ENST00000451218 FOXD4L1Q9NU39 408 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 FMN2Q9NZ56 1722 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 RNF123Q5XPI4 1314 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 PEAK1Q9H792 1746 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
USP46-202ENST00000451218 ATP7BP35670 1465 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 NUTM2DQ5VT03 806 aaPredicted RBP9.12□□□□□ -0.95
USP46-202ENST00000451218 TMEM2Q9UHN6 1383 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 FKBP8Q14318 412 aa9.12□□□□□ -0.95
USP46-202ENST00000451218 MAP2P11137 1827 aaKnown RBP9.11□□□□□ -0.95
USP46-202ENST00000451218 SUPT16HQ9Y5B9 1047 aaKnown RBP9.11□□□□□ -0.95
USP46-202ENST00000451218 TMF1P82094 1093 aa9.11□□□□□ -0.95
USP46-202ENST00000451218 TNRQ92752 1358 aa9.11□□□□□ -0.95
USP46-202ENST00000451218 CPSF1Q10570 1443 aaKnown RBP9.11□□□□□ -0.95
USP46-202ENST00000451218 XIRP1Q702N8 1843 aaKnown RBP9.11□□□□□ -0.95
USP46-202ENST00000451218 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
USP46-202ENST00000451218 CENPJQ9HC77 1338 aaPredicted RBP9.1□□□□□ -0.95
USP46-202ENST00000451218 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
USP46-202ENST00000451218 ZNF521Q96K83 1311 aa9.1□□□□□ -0.95
USP46-202ENST00000451218 FAM135BQ49AJ0 1406 aa9.1□□□□□ -0.95
USP46-202ENST00000451218 NWD1Q149M9 1564 aa9.1□□□□□ -0.95
USP46-202ENST00000451218 PUS7Q96PZ0 661 aaKnown RBP9.09□□□□□ -0.95
USP46-202ENST00000451218 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
USP46-202ENST00000451218 RALBP1Q15311 655 aa9.09□□□□□ -0.95
USP46-202ENST00000451218 A0A1W2PP64 1363 aa9.09□□□□□ -0.95
USP46-202ENST00000451218 PLEKHG1Q9ULL1 1385 aa9.09□□□□□ -0.95
USP46-202ENST00000451218 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
USP46-202ENST00000451218 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 ANKRD36BQ8N2N9 1353 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 DLG5Q8TDM6 1919 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 NSD3Q9BZ95 1437 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 LTKP29376 864 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
USP46-202ENST00000451218 SSH2Q76I76 1423 aa9.07□□□□□ -0.96
USP46-202ENST00000451218 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
USP46-202ENST00000451218 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
USP46-202ENST00000451218 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
USP46-202ENST00000451218 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
USP46-202ENST00000451218 MAPK8IP2Q13387 824 aaPredicted RBP9.06□□□□□ -0.96
USP46-202ENST00000451218 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
USP46-202ENST00000451218 CRYBG1Q9Y4K1 1723 aa9.06□□□□□ -0.96
USP46-202ENST00000451218 NLRP13Q86W25 1043 aa9.04□□□□□ -0.96
USP46-202ENST00000451218 SLC12A5Q9H2X9 1139 aa9.04□□□□□ -0.96
USP46-202ENST00000451218 TRPM3Q9HCF6 1732 aaPredicted RBP9.04□□□□□ -0.96
USP46-202ENST00000451218 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
USP46-202ENST00000451218 POLR3AO14802 1390 aaPredicted RBP9.04□□□□□ -0.96
USP46-202ENST00000451218 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
USP46-202ENST00000451218 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
USP46-202ENST00000451218 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
USP46-202ENST00000451218 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
USP46-202ENST00000451218 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
USP46-202ENST00000451218 LRRC7Q96NW7 1537 aa9.03□□□□□ -0.96
USP46-202ENST00000451218 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
USP46-202ENST00000451218 HNRNPUQ00839 825 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP46-202ENST00000451218 MLECQ14165 292 aa9.02□□□□□ -0.97
USP46-202ENST00000451218 FAM9BQ8IZU0 186 aa9.02□□□□□ -0.97
USP46-202ENST00000451218 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
USP46-202ENST00000451218 PRAM1Q96QH2 718 aa9.01□□□□□ -0.97
USP46-202ENST00000451218 TRMT2AQ8IZ69 625 aaKnown RBP9.01□□□□□ -0.97
USP46-202ENST00000451218 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
USP46-202ENST00000451218 CHGAP10645 457 aaKnown RBP9□□□□□ -0.97
USP46-202ENST00000451218 WAPLQ7Z5K2 1190 aa9□□□□□ -0.97
USP46-202ENST00000451218 CABP2Q9NPB3 220 aa9□□□□□ -0.97
USP46-202ENST00000451218 ZBTB22O15209 634 aa9□□□□□ -0.97
USP46-202ENST00000451218 VIRMAQ69YN4 1812 aaKnown RBP9□□□□□ -0.97
USP46-202ENST00000451218 OVOS2A0A0J9YW53 1432 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 OVOS2Q6IE36 1432 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 NSD2O96028 1365 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 DMRT2Q9Y5R5 561 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 CAMTA1Q9Y6Y1 1673 aa8.99□□□□□ -0.97
USP46-202ENST00000451218 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
USP46-202ENST00000451218 LTN1O94822 1766 aa8.98□□□□□ -0.97
USP46-202ENST00000451218 LRRC37A3O60309 1634 aa8.98□□□□□ -0.97
USP46-202ENST00000451218 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
USP46-202ENST00000451218 SPINK5Q9NQ38 1064 aaPredicted RBP8.98□□□□□ -0.97
USP46-202ENST00000451218 MSH5O43196 834 aa8.97□□□□□ -0.97
USP46-202ENST00000451218 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
USP46-202ENST00000451218 ATAD2Q6PL18 1390 aa8.97□□□□□ -0.97
USP46-202ENST00000451218 EVC2Q86UK5 1308 aa8.97□□□□□ -0.97
USP46-202ENST00000451218 RGPD2P0DJD1 1756 aa8.97□□□□□ -0.97
USP46-202ENST00000451218 CDCA8Q53HL2 280 aa8.96□□□□□ -0.97
USP46-202ENST00000451218 PPIP5K1Q6PFW1 1433 aa8.96□□□□□ -0.97
USP46-202ENST00000451218 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.97
USP46-202ENST00000451218 FYB1O15117 783 aa8.96□□□□□ -0.97
USP46-202ENST00000451218 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
USP46-202ENST00000451218 CDK19Q9BWU1 502 aa8.95□□□□□ -0.98
USP46-202ENST00000451218 EDC4Q6P2E9 1401 aaKnown RBP8.95□□□□□ -0.98
USP46-202ENST00000451218 PLEKHF1Q96S99 279 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms