RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 LRPPRCP42704 1394 aaKnown RBP14.74□□□□□ -0.05
LINC01238-204ENST00000451070 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 RXRBP28702 533 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 TMEM132EQ6IEE7 984 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 STK26Q9P289 416 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 CDK12Q9NYV4 1490 aaPredicted RBP14.73□□□□□ -0.05
LINC01238-204ENST00000451070 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
LINC01238-204ENST00000451070 C8orf37Q96NL8 207 aa14.72□□□□□ -0.05
LINC01238-204ENST00000451070 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
LINC01238-204ENST00000451070 NRXN1Q9ULB1 1477 aa14.71□□□□□ -0.05
LINC01238-204ENST00000451070 YTHDC2Q9H6S0 1430 aaKnown RBP14.71□□□□□ -0.05
LINC01238-204ENST00000451070 PXDNQ92626 1479 aa14.7□□□□□ -0.06
LINC01238-204ENST00000451070 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
LINC01238-204ENST00000451070 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
LINC01238-204ENST00000451070 ADAMTS2O95450 1211 aa14.7□□□□□ -0.06
LINC01238-204ENST00000451070 ESCO1Q5FWF5 840 aa14.7□□□□□ -0.06
LINC01238-204ENST00000451070 UPF1Q92900 1129 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC01238-204ENST00000451070 RAB3GAP2Q9H2M9 1393 aa14.7□□□□□ -0.06
LINC01238-204ENST00000451070 C14orf93Q9H972 538 aaKnown RBP14.69□□□□□ -0.06
LINC01238-204ENST00000451070 QTRT2Q9H974 415 aaKnown RBP14.69□□□□□ -0.06
LINC01238-204ENST00000451070 MYOM2P54296 1465 aa14.69□□□□□ -0.06
LINC01238-204ENST00000451070 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
LINC01238-204ENST00000451070 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
LINC01238-204ENST00000451070 RGS12O14924 1447 aa14.67□□□□□ -0.06
LINC01238-204ENST00000451070 FOXO3O43524 673 aa14.67□□□□□ -0.06
LINC01238-204ENST00000451070 RBM6P78332 1123 aaKnown RBP14.67□□□□□ -0.06
LINC01238-204ENST00000451070 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
LINC01238-204ENST00000451070 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
LINC01238-204ENST00000451070 RGPD8O14715 1765 aaPredicted RBP14.66□□□□□ -0.06
LINC01238-204ENST00000451070 XPCQ01831 940 aaPredicted RBP14.66□□□□□ -0.06
LINC01238-204ENST00000451070 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
LINC01238-204ENST00000451070 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
LINC01238-204ENST00000451070 FNBP4Q8N3X1 1017 aaPredicted RBP14.65□□□□□ -0.06
LINC01238-204ENST00000451070 KIF1AQ12756 1690 aa14.65□□□□□ -0.06
LINC01238-204ENST00000451070 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
LINC01238-204ENST00000451070 USP21Q9UK80 565 aa14.63□□□□□ -0.07
LINC01238-204ENST00000451070 ATRNO75882 1429 aa14.62□□□□□ -0.07
LINC01238-204ENST00000451070 ADGRB1O14514 1584 aa14.61□□□□□ -0.07
LINC01238-204ENST00000451070 BCL9LQ86UU0 1499 aa14.61□□□□□ -0.07
LINC01238-204ENST00000451070 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
LINC01238-204ENST00000451070 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
LINC01238-204ENST00000451070 PRAM1Q96QH2 718 aa14.6□□□□□ -0.07
LINC01238-204ENST00000451070 TRPC5Q9UL62 973 aaPredicted RBP14.6□□□□□ -0.07
LINC01238-204ENST00000451070 USP32Q8NFA0 1604 aa14.59□□□□□ -0.07
LINC01238-204ENST00000451070 SAFB2Q14151 953 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC01238-204ENST00000451070 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
LINC01238-204ENST00000451070 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
LINC01238-204ENST00000451070 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
LINC01238-204ENST00000451070 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.58□□□□□ -0.08
LINC01238-204ENST00000451070 ADRA2BP18089 450 aa14.57□□□□□ -0.08
LINC01238-204ENST00000451070 TNS3Q68CZ2 1445 aa14.56□□□□□ -0.08
LINC01238-204ENST00000451070 SLIT2O94813 1529 aa14.56□□□□□ -0.08
LINC01238-204ENST00000451070 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
LINC01238-204ENST00000451070 HRCP23327 699 aa14.55□□□□□ -0.08
LINC01238-204ENST00000451070 POGKQ9P215 609 aa14.55□□□□□ -0.08
LINC01238-204ENST00000451070 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
LINC01238-204ENST00000451070 DCAF11Q8TEB1 546 aa14.54□□□□□ -0.08
LINC01238-204ENST00000451070 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
LINC01238-204ENST00000451070 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
LINC01238-204ENST00000451070 EP400Q96L91 3159 aa14.53□□□□□ -0.08
LINC01238-204ENST00000451070 GLI3P10071 1580 aa14.53□□□□□ -0.08
LINC01238-204ENST00000451070 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
LINC01238-204ENST00000451070 ATAD2Q6PL18 1390 aa14.53□□□□□ -0.08
LINC01238-204ENST00000451070 TRPM3Q9HCF6 1732 aaPredicted RBP14.52□□□□□ -0.08
LINC01238-204ENST00000451070 PSME1Q06323 249 aa14.52□□□□□ -0.09
LINC01238-204ENST00000451070 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
LINC01238-204ENST00000451070 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
LINC01238-204ENST00000451070 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
LINC01238-204ENST00000451070 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
LINC01238-204ENST00000451070 HIRIP3Q9BW71 556 aaPredicted RBP14.52□□□□□ -0.09
LINC01238-204ENST00000451070 ARHGEF28Q8N1W1 1705 aaKnown RBP14.52□□□□□ -0.09
LINC01238-204ENST00000451070 PRR36Q9H6K5 1346 aa14.51□□□□□ -0.09
LINC01238-204ENST00000451070 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
LINC01238-204ENST00000451070 PLCH1Q4KWH8 1693 aa14.51□□□□□ -0.09
LINC01238-204ENST00000451070 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
LINC01238-204ENST00000451070 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
LINC01238-204ENST00000451070 NWD2Q9ULI1 1742 aa14.5□□□□□ -0.09
LINC01238-204ENST00000451070 MINK1Q8N4C8 1332 aaPredicted RBP14.5□□□□□ -0.09
LINC01238-204ENST00000451070 ALS2Q96Q42 1657 aa14.5□□□□□ -0.09
LINC01238-204ENST00000451070 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
LINC01238-204ENST00000451070 BRWD3Q6RI45 1802 aa14.49□□□□□ -0.09
LINC01238-204ENST00000451070 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
LINC01238-204ENST00000451070 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
LINC01238-204ENST00000451070 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
LINC01238-204ENST00000451070 LMOD2Q6P5Q4 547 aa14.47□□□□□ -0.09
LINC01238-204ENST00000451070 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
LINC01238-204ENST00000451070 NRAPQ86VF7 1730 aa14.46□□□□□ -0.1
LINC01238-204ENST00000451070 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.1
LINC01238-204ENST00000451070 ITSN1Q15811 1721 aa14.45□□□□□ -0.1
LINC01238-204ENST00000451070 VPS72Q15906 364 aa14.45□□□□□ -0.1
LINC01238-204ENST00000451070 KIAA1210Q9ULL0 1709 aa14.45□□□□□ -0.1
LINC01238-204ENST00000451070 ATP7BP35670 1465 aa14.44□□□□□ -0.1
LINC01238-204ENST00000451070 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
LINC01238-204ENST00000451070 GPRASP1Q5JY77 1395 aa14.44□□□□□ -0.1
LINC01238-204ENST00000451070 ONECUT3O60422 494 aaPredicted RBP14.42□□□□□ -0.1
LINC01238-204ENST00000451070 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
LINC01238-204ENST00000451070 COL14A1Q05707 1796 aaKnown RBP14.42□□□□□ -0.1
LINC01238-204ENST00000451070 CCDC125Q86Z20 511 aa14.41□□□□□ -0.1
LINC01238-204ENST00000451070 NGDNQ8NEJ9 315 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms