RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 RRP7AQ9Y3A4 280 aaKnown RBP28.87■■■□□ 2.21
TTC3-210ENST00000450533 BCL11AQ9H165 835 aa28.87■■■□□ 2.21
TTC3-210ENST00000450533 SIGLEC1Q9BZZ2 1709 aa28.87■■■□□ 2.21
TTC3-210ENST00000450533 DEKP35659 375 aaKnown RBP28.85■■■□□ 2.21
TTC3-210ENST00000450533 CAMSAP1Q5T5Y3 1602 aa28.85■■■□□ 2.21
TTC3-210ENST00000450533 SAFB2Q14151 953 aaKnown RBP eCLIP28.84■■■□□ 2.21
TTC3-210ENST00000450533 NGEFQ8N5V2 710 aa28.82■■■□□ 2.2
TTC3-210ENST00000450533 SHPRHQ149N8 1683 aa28.82■■■□□ 2.2
TTC3-210ENST00000450533 MTHFSP49914 203 aa28.82■■■□□ 2.2
TTC3-210ENST00000450533 GLI2P10070 1586 aa28.82■■■□□ 2.2
TTC3-210ENST00000450533 VGFO15240 615 aaPredicted RBP28.81■■■□□ 2.2
TTC3-210ENST00000450533 CGNL1Q0VF96 1302 aa28.81■■■□□ 2.2
TTC3-210ENST00000450533 CABP2Q9NPB3 220 aa28.8■■■□□ 2.2
TTC3-210ENST00000450533 EVC2Q86UK5 1308 aa28.79■■■□□ 2.2
TTC3-210ENST00000450533 RGS3P49796 1198 aa28.79■■■□□ 2.2
TTC3-210ENST00000450533 TCP11L2Q8N4U5 519 aa28.79■■■□□ 2.2
TTC3-210ENST00000450533 RUNDC1Q96C34 613 aa28.79■■■□□ 2.2
TTC3-210ENST00000450533 IDI1Q13907 227 aa28.78■■■□□ 2.2
TTC3-210ENST00000450533 LAS1LQ9Y4W2 734 aaKnown RBP28.78■■■□□ 2.2
TTC3-210ENST00000450533 NEXMIFQ5QGS0 1516 aa28.77■■■□□ 2.2
TTC3-210ENST00000450533 TULP4Q9NRJ4 1543 aa28.76■■■□□ 2.19
TTC3-210ENST00000450533 STK26Q9P289 416 aa28.76■■■□□ 2.19
TTC3-210ENST00000450533 DIP2CQ9Y2E4 1556 aa28.76■■■□□ 2.19
TTC3-210ENST00000450533 NEO1Q92859 1461 aa28.76■■■□□ 2.19
TTC3-210ENST00000450533 CANXP27824 592 aaKnown RBP28.76■■■□□ 2.19
TTC3-210ENST00000450533 RTL5Q5HYW3 569 aaPredicted RBP28.75■■■□□ 2.19
TTC3-210ENST00000450533 PIK3C2BO00750 1634 aa28.75■■■□□ 2.19
TTC3-210ENST00000450533 ARHGEF28Q8N1W1 1705 aaKnown RBP28.74■■■□□ 2.19
TTC3-210ENST00000450533 PANK1Q8TE04 598 aa28.74■■■□□ 2.19
TTC3-210ENST00000450533 FRAT1Q92837 279 aaPredicted RBP28.72■■■□□ 2.19
TTC3-210ENST00000450533 CFAP53Q96M91 514 aa28.72■■■□□ 2.19
TTC3-210ENST00000450533 COG6Q9Y2V7 657 aa28.72■■■□□ 2.19
TTC3-210ENST00000450533 ANKRD36BQ8N2N9 1353 aa28.72■■■□□ 2.19
TTC3-210ENST00000450533 C8orf34Q49A92 452 aa28.71■■■□□ 2.19
TTC3-210ENST00000450533 IGHDP01880 384 aa28.71■■■□□ 2.19
TTC3-210ENST00000450533 FAM161AQ3B820 660 aa28.71■■■□□ 2.19
TTC3-210ENST00000450533 YEATS2Q9ULM3 1422 aa28.71■■■□□ 2.19
TTC3-210ENST00000450533 USP32Q8NFA0 1604 aa28.7■■■□□ 2.19
TTC3-210ENST00000450533 IQSEC2Q5JU85 1478 aa28.7■■■□□ 2.18
TTC3-210ENST00000450533 PDE3AQ14432 1141 aa28.69■■■□□ 2.18
TTC3-210ENST00000450533 U2AF1L5P0DN76 240 aaPredicted RBP28.67■■■□□ 2.18
TTC3-210ENST00000450533 SRPK2P78362 688 aaKnown RBP28.67■■■□□ 2.18
TTC3-210ENST00000450533 U2AF1Q01081 240 aaKnown RBP eCLIP28.67■■■□□ 2.18
TTC3-210ENST00000450533 DDRGK1Q96HY6 314 aa28.66■■■□□ 2.18
TTC3-210ENST00000450533 PUS7Q96PZ0 661 aaKnown RBP28.66■■■□□ 2.18
TTC3-210ENST00000450533 PHF23Q9BUL5 403 aaPredicted RBP28.66■■■□□ 2.18
TTC3-210ENST00000450533 BCL2L13Q9BXK5 485 aa28.66■■■□□ 2.18
TTC3-210ENST00000450533 RARSP54136 660 aaKnown RBP28.65■■■□□ 2.18
TTC3-210ENST00000450533 ARHGAP31Q2M1Z3 1444 aa28.65■■■□□ 2.18
TTC3-210ENST00000450533 CLUAP1Q96AJ1 413 aa28.64■■■□□ 2.18
TTC3-210ENST00000450533 SLC4A3P48751 1232 aa28.64■■■□□ 2.17
TTC3-210ENST00000450533 SLC52A1Q9NWF4 448 aa28.64■■■□□ 2.17
TTC3-210ENST00000450533 RICTORQ6R327 1708 aa28.63■■■□□ 2.17
TTC3-210ENST00000450533 A0A1W2PP64 1363 aa28.63■■■□□ 2.17
TTC3-210ENST00000450533 WDR63Q8IWG1 891 aa28.63■■■□□ 2.17
TTC3-210ENST00000450533 TNNQ9UQP3 1299 aa28.63■■■□□ 2.17
TTC3-210ENST00000450533 GGNBP2Q9H3C7 697 aa28.62■■■□□ 2.17
TTC3-210ENST00000450533 MINK1Q8N4C8 1332 aaPredicted RBP28.62■■■□□ 2.17
TTC3-210ENST00000450533 MYO5BQ9ULV0 1848 aa28.62■■■□□ 2.17
TTC3-210ENST00000450533 NSD2O96028 1365 aa28.61■■■□□ 2.17
TTC3-210ENST00000450533 NEFMP07197 916 aa28.61■■■□□ 2.17
TTC3-210ENST00000450533 NINLQ9Y2I6 1382 aa28.6■■■□□ 2.17
TTC3-210ENST00000450533 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
TTC3-210ENST00000450533 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
TTC3-210ENST00000450533 RLBP1P12271 317 aa28.58■■■□□ 2.17
TTC3-210ENST00000450533 CCDC27Q2M243 656 aa28.58■■■□□ 2.17
TTC3-210ENST00000450533 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
TTC3-210ENST00000450533 U2SURPO15042 1029 aaKnown RBP28.57■■■□□ 2.16
TTC3-210ENST00000450533 POGKQ9P215 609 aa28.56■■■□□ 2.16
TTC3-210ENST00000450533 ABCC11Q96J66 1382 aa28.56■■■□□ 2.16
TTC3-210ENST00000450533 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
TTC3-210ENST00000450533 TMEM131LA2VDJ0 1609 aa28.53■■■□□ 2.16
TTC3-210ENST00000450533 PTPRMP28827 1452 aa28.53■■■□□ 2.16
TTC3-210ENST00000450533 MYH16Q9H6N6 1097 aa28.53■■■□□ 2.16
TTC3-210ENST00000450533 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
TTC3-210ENST00000450533 TSR2Q969E8 191 aaKnown RBP28.51■■■□□ 2.15
TTC3-210ENST00000450533 DAXXQ9UER7 740 aaPredicted RBP28.51■■■□□ 2.15
TTC3-210ENST00000450533 YTHDC2Q9H6S0 1430 aaKnown RBP28.5■■■□□ 2.15
TTC3-210ENST00000450533 FYB1O15117 783 aa28.5■■■□□ 2.15
TTC3-210ENST00000450533 PCDHB15Q9Y5E8 787 aa28.5■■■□□ 2.15
TTC3-210ENST00000450533 CYB5RLQ6IPT4 315 aa28.49■■■□□ 2.15
TTC3-210ENST00000450533 TERF2IPQ9NYB0 399 aa28.49■■■□□ 2.15
TTC3-210ENST00000450533 STAG3Q9UJ98 1225 aa28.48■■■□□ 2.15
TTC3-210ENST00000450533 ATAD2Q6PL18 1390 aa28.47■■■□□ 2.15
TTC3-210ENST00000450533 ADGRB2O60241 1585 aa28.46■■■□□ 2.15
TTC3-210ENST00000450533 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
TTC3-210ENST00000450533 CD163L1Q9NR16 1453 aa28.45■■■□□ 2.15
TTC3-210ENST00000450533 TMPOP42166 694 aaKnown RBP28.45■■■□□ 2.14
TTC3-210ENST00000450533 USP35Q9P2H5 1018 aa28.45■■■□□ 2.14
TTC3-210ENST00000450533 CDK19Q9BWU1 502 aa28.44■■■□□ 2.14
TTC3-210ENST00000450533 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
TTC3-210ENST00000450533 PMFBP1Q8TBY8 1022 aa28.43■■■□□ 2.14
TTC3-210ENST00000450533 CABP1Q9NZU7 370 aa28.43■■■□□ 2.14
TTC3-210ENST00000450533 COL3A1P02461 1466 aaPredicted RBP28.42■■■□□ 2.14
TTC3-210ENST00000450533 TRIM35Q9UPQ4 493 aa28.42■■■□□ 2.14
TTC3-210ENST00000450533 SEC24BO95487 1268 aa28.42■■■□□ 2.14
TTC3-210ENST00000450533 EXOSC9Q06265 439 aaKnown RBP28.42■■■□□ 2.14
TTC3-210ENST00000450533 NCBP3Q53F19 620 aaKnown RBP28.42■■■□□ 2.14
TTC3-210ENST00000450533 HDGFL2Q7Z4V5 671 aaPredicted RBP28.41■■■□□ 2.14
TTC3-210ENST00000450533 ALKQ9UM73 1620 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms