RNA–Protein interactions for RNA: ENST00000449891.5

UBE2F-SCLY-202, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene UBE2F-SCLY, Length 2,902 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-202ENST00000449891 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
UBE2F-SCLY-202ENST00000449891 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
UBE2F-SCLY-202ENST00000449891 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 GGT6Q6P531 493 aa17.01■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 PCDHB15Q9Y5E8 787 aa17.01■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 MTHFSP49914 203 aa17■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 ATP7AQ04656 1500 aa16.99■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 POGKQ9P215 609 aa16.98■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 ABCA6Q8N139 1617 aa16.98■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 USP19O94966 1318 aa16.98■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 MADDQ8WXG6 1647 aa16.97■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
UBE2F-SCLY-202ENST00000449891 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 STK26Q9P289 416 aa16.94■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 INSRP06213 1382 aa16.94■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 KANK1Q14678 1352 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 REREQ9P2R6 1566 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 LAMC1P11047 1609 aa16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 RNF17Q9BXT8 1623 aaKnown RBP16.91■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 AGLP35573 1532 aa16.9■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 SYNMO15061 1565 aa16.9■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 FBLN1P23142 703 aa16.9■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 NOS1P29475 1434 aa16.9■□□□□ 0.3
UBE2F-SCLY-202ENST00000449891 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 MYOM1P52179 1685 aa16.89■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 PTPRMP28827 1452 aa16.88■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 FTSJ3Q8IY81 847 aaKnown RBP16.88■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 TRPM2O94759 1503 aa16.86■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 PTPRTO14522 1441 aa16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 BECN1Q14457 450 aa16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 KDM5AP29375 1690 aaKnown RBP16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
UBE2F-SCLY-202ENST00000449891 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 CEBPAP49715 358 aaPredicted RBP16.81■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 CEP152O94986 1710 aa16.8■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 TRIM27P14373 513 aa16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
UBE2F-SCLY-202ENST00000449891 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 RIPK4P57078 832 aa16.75■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
UBE2F-SCLY-202ENST00000449891 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms