RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.18
CCDC171-203ENST00000449575 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
CCDC171-203ENST00000449575 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
CCDC171-203ENST00000449575 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
CCDC171-203ENST00000449575 FAM135BQ49AJ0 1406 aa13.95□□□□□ -0.18
CCDC171-203ENST00000449575 RGPD8O14715 1765 aaPredicted RBP13.95□□□□□ -0.18
CCDC171-203ENST00000449575 POGKQ9P215 609 aa13.94□□□□□ -0.18
CCDC171-203ENST00000449575 ADGRL3Q9HAR2 1447 aa13.93□□□□□ -0.18
CCDC171-203ENST00000449575 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
CCDC171-203ENST00000449575 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
CCDC171-203ENST00000449575 MSH6P52701 1360 aa13.91□□□□□ -0.18
CCDC171-203ENST00000449575 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
CCDC171-203ENST00000449575 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
CCDC171-203ENST00000449575 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
CCDC171-203ENST00000449575 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
CCDC171-203ENST00000449575 USP47Q96K76 1375 aa13.9□□□□□ -0.18
CCDC171-203ENST00000449575 IQSEC2Q5JU85 1478 aa13.9□□□□□ -0.18
CCDC171-203ENST00000449575 ST20-MTHFSA0A0A6YYL1 179 aa13.89□□□□□ -0.19
CCDC171-203ENST00000449575 FMN2Q9NZ56 1722 aa13.89□□□□□ -0.19
CCDC171-203ENST00000449575 UBAP1LF5GYI3 381 aa13.89□□□□□ -0.19
CCDC171-203ENST00000449575 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
CCDC171-203ENST00000449575 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
CCDC171-203ENST00000449575 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
CCDC171-203ENST00000449575 TULP4Q9NRJ4 1543 aa13.87□□□□□ -0.19
CCDC171-203ENST00000449575 ATF3P18847 181 aa13.87□□□□□ -0.19
CCDC171-203ENST00000449575 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
CCDC171-203ENST00000449575 MST1RQ04912 1400 aa13.86□□□□□ -0.19
CCDC171-203ENST00000449575 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
CCDC171-203ENST00000449575 TESK2Q96S53 571 aa13.86□□□□□ -0.19
CCDC171-203ENST00000449575 DCCP43146 1447 aa13.85□□□□□ -0.19
CCDC171-203ENST00000449575 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
CCDC171-203ENST00000449575 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
CCDC171-203ENST00000449575 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
CCDC171-203ENST00000449575 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
CCDC171-203ENST00000449575 PRR36Q9H6K5 1346 aa13.84□□□□□ -0.19
CCDC171-203ENST00000449575 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
CCDC171-203ENST00000449575 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.19
CCDC171-203ENST00000449575 TOM1O60784 492 aa13.83□□□□□ -0.19
CCDC171-203ENST00000449575 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.19
CCDC171-203ENST00000449575 ORAI2Q96SN7 254 aa13.83□□□□□ -0.19
CCDC171-203ENST00000449575 CDK19Q9BWU1 502 aa13.83□□□□□ -0.19
CCDC171-203ENST00000449575 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
CCDC171-203ENST00000449575 DDX17Q92841 729 aaKnown RBP13.82□□□□□ -0.2
CCDC171-203ENST00000449575 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC171-203ENST00000449575 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
CCDC171-203ENST00000449575 ATP7BP35670 1465 aa13.81□□□□□ -0.2
CCDC171-203ENST00000449575 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
CCDC171-203ENST00000449575 BRINP3Q76B58 766 aa13.8□□□□□ -0.2
CCDC171-203ENST00000449575 TOPAZ1Q8N9V7 1692 aa13.8□□□□□ -0.2
CCDC171-203ENST00000449575 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
CCDC171-203ENST00000449575 ESCO1Q5FWF5 840 aa13.79□□□□□ -0.2
CCDC171-203ENST00000449575 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
CCDC171-203ENST00000449575 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
CCDC171-203ENST00000449575 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
CCDC171-203ENST00000449575 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
CCDC171-203ENST00000449575 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
CCDC171-203ENST00000449575 FBXO41Q8TF61 875 aa13.77□□□□□ -0.2
CCDC171-203ENST00000449575 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.21
CCDC171-203ENST00000449575 XPCQ01831 940 aaPredicted RBP13.76□□□□□ -0.21
CCDC171-203ENST00000449575 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
CCDC171-203ENST00000449575 FOXO3O43524 673 aa13.75□□□□□ -0.21
CCDC171-203ENST00000449575 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
CCDC171-203ENST00000449575 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
CCDC171-203ENST00000449575 MYOM1P52179 1685 aa13.74□□□□□ -0.21
CCDC171-203ENST00000449575 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
CCDC171-203ENST00000449575 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
CCDC171-203ENST00000449575 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
CCDC171-203ENST00000449575 HSPA1LP34931 641 aa13.73□□□□□ -0.21
CCDC171-203ENST00000449575 TMF1P82094 1093 aa13.73□□□□□ -0.21
CCDC171-203ENST00000449575 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
CCDC171-203ENST00000449575 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
CCDC171-203ENST00000449575 COL16A1Q07092 1604 aaPredicted RBP13.72□□□□□ -0.21
CCDC171-203ENST00000449575 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
CCDC171-203ENST00000449575 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
CCDC171-203ENST00000449575 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
CCDC171-203ENST00000449575 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
CCDC171-203ENST00000449575 ACEP12821 1306 aa13.7□□□□□ -0.22
CCDC171-203ENST00000449575 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
CCDC171-203ENST00000449575 PXDNQ92626 1479 aa13.7□□□□□ -0.22
CCDC171-203ENST00000449575 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
CCDC171-203ENST00000449575 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
CCDC171-203ENST00000449575 ERICH6Q7L0X2 663 aa13.69□□□□□ -0.22
CCDC171-203ENST00000449575 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
CCDC171-203ENST00000449575 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
CCDC171-203ENST00000449575 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
CCDC171-203ENST00000449575 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
CCDC171-203ENST00000449575 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
CCDC171-203ENST00000449575 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
CCDC171-203ENST00000449575 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
CCDC171-203ENST00000449575 KRT28Q7Z3Y7 464 aa13.67□□□□□ -0.22
CCDC171-203ENST00000449575 WASHC2AQ641Q2 1341 aa13.67□□□□□ -0.22
CCDC171-203ENST00000449575 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
CCDC171-203ENST00000449575 PSME1Q06323 249 aa13.66□□□□□ -0.22
CCDC171-203ENST00000449575 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
CCDC171-203ENST00000449575 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
CCDC171-203ENST00000449575 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
CCDC171-203ENST00000449575 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
CCDC171-203ENST00000449575 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
CCDC171-203ENST00000449575 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
CCDC171-203ENST00000449575 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms