RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
RFX3-207ENST00000449190 STK26Q9P289 416 aa13.16□□□□□ -0.3
RFX3-207ENST00000449190 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
RFX3-207ENST00000449190 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
RFX3-207ENST00000449190 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
RFX3-207ENST00000449190 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
RFX3-207ENST00000449190 DCCP43146 1447 aa13.15□□□□□ -0.3
RFX3-207ENST00000449190 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
RFX3-207ENST00000449190 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
RFX3-207ENST00000449190 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
RFX3-207ENST00000449190 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
RFX3-207ENST00000449190 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
RFX3-207ENST00000449190 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
RFX3-207ENST00000449190 NRXN1Q9ULB1 1477 aa13.14□□□□□ -0.31
RFX3-207ENST00000449190 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
RFX3-207ENST00000449190 MYOM2P54296 1465 aa13.13□□□□□ -0.31
RFX3-207ENST00000449190 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
RFX3-207ENST00000449190 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
RFX3-207ENST00000449190 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.12□□□□□ -0.31
RFX3-207ENST00000449190 TECPR2O15040 1411 aa13.11□□□□□ -0.31
RFX3-207ENST00000449190 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
RFX3-207ENST00000449190 SETD1AO15047 1707 aaKnown RBP13.1□□□□□ -0.31
RFX3-207ENST00000449190 POLA2Q14181 598 aa13.1□□□□□ -0.31
RFX3-207ENST00000449190 MST1RQ04912 1400 aa13.1□□□□□ -0.31
RFX3-207ENST00000449190 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
RFX3-207ENST00000449190 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
RFX3-207ENST00000449190 LRRC59Q96AG4 307 aaKnown RBP13.07□□□□□ -0.32
RFX3-207ENST00000449190 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
RFX3-207ENST00000449190 POGKQ9P215 609 aa13.07□□□□□ -0.32
RFX3-207ENST00000449190 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
RFX3-207ENST00000449190 JCADQ9P266 1359 aa13.07□□□□□ -0.32
RFX3-207ENST00000449190 PRAM1Q96QH2 718 aa13.06□□□□□ -0.32
RFX3-207ENST00000449190 TRAK1Q9UPV9 953 aa13.06□□□□□ -0.32
RFX3-207ENST00000449190 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
RFX3-207ENST00000449190 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
RFX3-207ENST00000449190 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
RFX3-207ENST00000449190 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
RFX3-207ENST00000449190 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
RFX3-207ENST00000449190 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
RFX3-207ENST00000449190 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
RFX3-207ENST00000449190 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
RFX3-207ENST00000449190 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.33
RFX3-207ENST00000449190 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
RFX3-207ENST00000449190 LAMC1P11047 1609 aa13.02□□□□□ -0.33
RFX3-207ENST00000449190 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 NBPF8Q3BBV2 869 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
RFX3-207ENST00000449190 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 NALCNQ8IZF0 1738 aa13.01□□□□□ -0.33
RFX3-207ENST00000449190 FOXO3O43524 673 aa13□□□□□ -0.33
RFX3-207ENST00000449190 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
RFX3-207ENST00000449190 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
RFX3-207ENST00000449190 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
RFX3-207ENST00000449190 RGS17Q9UGC6 210 aaPredicted RBP12.99□□□□□ -0.33
RFX3-207ENST00000449190 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
RFX3-207ENST00000449190 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
RFX3-207ENST00000449190 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
RFX3-207ENST00000449190 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
RFX3-207ENST00000449190 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
RFX3-207ENST00000449190 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
RFX3-207ENST00000449190 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
RFX3-207ENST00000449190 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
RFX3-207ENST00000449190 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
RFX3-207ENST00000449190 MEX3CQ5U5Q3 659 aaKnown RBP12.96□□□□□ -0.33
RFX3-207ENST00000449190 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
RFX3-207ENST00000449190 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
RFX3-207ENST00000449190 PSME1Q06323 249 aa12.95□□□□□ -0.34
RFX3-207ENST00000449190 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
RFX3-207ENST00000449190 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
RFX3-207ENST00000449190 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
RFX3-207ENST00000449190 SOCS7O14512 581 aa12.94□□□□□ -0.34
RFX3-207ENST00000449190 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
RFX3-207ENST00000449190 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
RFX3-207ENST00000449190 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
RFX3-207ENST00000449190 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
RFX3-207ENST00000449190 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
RFX3-207ENST00000449190 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
RFX3-207ENST00000449190 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
RFX3-207ENST00000449190 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
RFX3-207ENST00000449190 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
RFX3-207ENST00000449190 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
RFX3-207ENST00000449190 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
RFX3-207ENST00000449190 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
RFX3-207ENST00000449190 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
RFX3-207ENST00000449190 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
RFX3-207ENST00000449190 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
RFX3-207ENST00000449190 SHPRHQ149N8 1683 aa12.9□□□□□ -0.34
RFX3-207ENST00000449190 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
RFX3-207ENST00000449190 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
RFX3-207ENST00000449190 LRP6O75581 1613 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 PXDNQ92626 1479 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
RFX3-207ENST00000449190 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
RFX3-207ENST00000449190 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
RFX3-207ENST00000449190 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.351e-9■■■■□ 22.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms