RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
POLR1B-209ENST00000448770 SBNO2Q9Y2G9 1366 aa17.67■□□□□ 0.42
POLR1B-209ENST00000448770 ADGRB3O60242 1522 aa17.67■□□□□ 0.42
POLR1B-209ENST00000448770 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
POLR1B-209ENST00000448770 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
POLR1B-209ENST00000448770 ANO8Q9HCE9 1232 aaPredicted RBP17.66■□□□□ 0.42
POLR1B-209ENST00000448770 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
POLR1B-209ENST00000448770 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
POLR1B-209ENST00000448770 QRICH2Q9H0J4 1663 aa17.65■□□□□ 0.42
POLR1B-209ENST00000448770 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
POLR1B-209ENST00000448770 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
POLR1B-209ENST00000448770 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
POLR1B-209ENST00000448770 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
POLR1B-209ENST00000448770 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.42
POLR1B-209ENST00000448770 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.42
POLR1B-209ENST00000448770 TMEM132EQ6IEE7 984 aa17.64■□□□□ 0.41
POLR1B-209ENST00000448770 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
POLR1B-209ENST00000448770 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
POLR1B-209ENST00000448770 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
POLR1B-209ENST00000448770 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
POLR1B-209ENST00000448770 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
POLR1B-209ENST00000448770 PPLO60437 1756 aa17.61■□□□□ 0.41
POLR1B-209ENST00000448770 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
POLR1B-209ENST00000448770 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
POLR1B-209ENST00000448770 LMTK2Q8IWU2 1503 aa17.61■□□□□ 0.41
POLR1B-209ENST00000448770 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
POLR1B-209ENST00000448770 NPATQ14207 1427 aa17.6■□□□□ 0.41
POLR1B-209ENST00000448770 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
POLR1B-209ENST00000448770 NINLQ9Y2I6 1382 aa17.6■□□□□ 0.41
POLR1B-209ENST00000448770 MTHFSP49914 203 aa17.6■□□□□ 0.41
POLR1B-209ENST00000448770 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.41
POLR1B-209ENST00000448770 FRMPD1Q5SYB0 1578 aa17.58■□□□□ 0.4
POLR1B-209ENST00000448770 MAPK8IP3Q9UPT6 1336 aa17.57■□□□□ 0.4
POLR1B-209ENST00000448770 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
POLR1B-209ENST00000448770 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
POLR1B-209ENST00000448770 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
POLR1B-209ENST00000448770 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
POLR1B-209ENST00000448770 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
POLR1B-209ENST00000448770 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
POLR1B-209ENST00000448770 SLKQ9H2G2 1235 aaPredicted RBP17.54■□□□□ 0.4
POLR1B-209ENST00000448770 GLI2P10070 1586 aa17.53■□□□□ 0.4
POLR1B-209ENST00000448770 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
POLR1B-209ENST00000448770 ADGRB2O60241 1585 aa17.53■□□□□ 0.4
POLR1B-209ENST00000448770 POGKQ9P215 609 aa17.53■□□□□ 0.4
POLR1B-209ENST00000448770 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.4
POLR1B-209ENST00000448770 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
POLR1B-209ENST00000448770 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.39
POLR1B-209ENST00000448770 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.39
POLR1B-209ENST00000448770 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
POLR1B-209ENST00000448770 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
POLR1B-209ENST00000448770 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
POLR1B-209ENST00000448770 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
POLR1B-209ENST00000448770 GGT6Q6P531 493 aa17.5■□□□□ 0.39
POLR1B-209ENST00000448770 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
POLR1B-209ENST00000448770 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
POLR1B-209ENST00000448770 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
POLR1B-209ENST00000448770 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
POLR1B-209ENST00000448770 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
POLR1B-209ENST00000448770 CABP2Q9NPB3 220 aa17.49■□□□□ 0.39
POLR1B-209ENST00000448770 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
POLR1B-209ENST00000448770 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
POLR1B-209ENST00000448770 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
POLR1B-209ENST00000448770 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
POLR1B-209ENST00000448770 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
POLR1B-209ENST00000448770 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
POLR1B-209ENST00000448770 ABCC3O15438 1527 aa17.48■□□□□ 0.39
POLR1B-209ENST00000448770 SAFB2Q14151 953 aaKnown RBP eCLIP17.47■□□□□ 0.39
POLR1B-209ENST00000448770 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
POLR1B-209ENST00000448770 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
POLR1B-209ENST00000448770 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.38
POLR1B-209ENST00000448770 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
POLR1B-209ENST00000448770 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
POLR1B-209ENST00000448770 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
POLR1B-209ENST00000448770 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
POLR1B-209ENST00000448770 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
POLR1B-209ENST00000448770 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
POLR1B-209ENST00000448770 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
POLR1B-209ENST00000448770 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 TRIM27P14373 513 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 BECN1Q14457 450 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
POLR1B-209ENST00000448770 EVC2Q86UK5 1308 aa17.42■□□□□ 0.38
POLR1B-209ENST00000448770 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
POLR1B-209ENST00000448770 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
POLR1B-209ENST00000448770 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
POLR1B-209ENST00000448770 AAMPQ13685 434 aa17.42■□□□□ 0.38
POLR1B-209ENST00000448770 SPRYD3Q8NCJ5 442 aa17.42■□□□□ 0.38
POLR1B-209ENST00000448770 SSH1Q8WYL5 1049 aa17.42■□□□□ 0.38
POLR1B-209ENST00000448770 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
POLR1B-209ENST00000448770 NSD2O96028 1365 aa17.41■□□□□ 0.38
POLR1B-209ENST00000448770 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
POLR1B-209ENST00000448770 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
POLR1B-209ENST00000448770 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
POLR1B-209ENST00000448770 SMC4Q9NTJ3 1288 aa17.4■□□□□ 0.38
POLR1B-209ENST00000448770 U2SURPO15042 1029 aaKnown RBP17.4■□□□□ 0.38
POLR1B-209ENST00000448770 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
POLR1B-209ENST00000448770 CD163L1Q9NR16 1453 aa17.39■□□□□ 0.37
POLR1B-209ENST00000448770 STK26Q9P289 416 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms