RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
RFC4-209ENST00000448497 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 MYO3AQ8NEV4 1616 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 MAP3K13O43283 966 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 ANP32CO43423 234 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
RFC4-209ENST00000448497 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
RFC4-209ENST00000448497 MYO5BQ9ULV0 1848 aa9.61□□□□□ -0.87
RFC4-209ENST00000448497 ERVK-7P63135 1459 aa9.6□□□□□ -0.87
RFC4-209ENST00000448497 SCAF11Q99590 1463 aaKnown RBP9.6□□□□□ -0.87
RFC4-209ENST00000448497 NEXMIFQ5QGS0 1516 aa9.6□□□□□ -0.87
RFC4-209ENST00000448497 ST20-MTHFSA0A0A6YYL1 179 aa9.59□□□□□ -0.87
RFC4-209ENST00000448497 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
RFC4-209ENST00000448497 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
RFC4-209ENST00000448497 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
RFC4-209ENST00000448497 TESK2Q96S53 571 aa9.57□□□□□ -0.88
RFC4-209ENST00000448497 SBNO2Q9Y2G9 1366 aa9.57□□□□□ -0.88
RFC4-209ENST00000448497 ADGRB1O14514 1584 aa9.56□□□□□ -0.88
RFC4-209ENST00000448497 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
RFC4-209ENST00000448497 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
RFC4-209ENST00000448497 EVX2Q03828 476 aa9.56□□□□□ -0.88
RFC4-209ENST00000448497 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
RFC4-209ENST00000448497 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
RFC4-209ENST00000448497 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
RFC4-209ENST00000448497 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
RFC4-209ENST00000448497 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
RFC4-209ENST00000448497 IDI1Q13907 227 aa9.54□□□□□ -0.88
RFC4-209ENST00000448497 C14orf93Q9H972 538 aaKnown RBP9.54□□□□□ -0.88
RFC4-209ENST00000448497 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
RFC4-209ENST00000448497 PRKRIP1Q9H875 184 aaPredicted RBP9.53□□□□□ -0.88
RFC4-209ENST00000448497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
RFC4-209ENST00000448497 TMF1P82094 1093 aa9.52□□□□□ -0.89
RFC4-209ENST00000448497 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
RFC4-209ENST00000448497 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
RFC4-209ENST00000448497 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
RFC4-209ENST00000448497 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
RFC4-209ENST00000448497 MYOM1P52179 1685 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 DISP3Q9P2K9 1392 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 STK25O00506 426 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 PSEN1P49768 467 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
RFC4-209ENST00000448497 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
RFC4-209ENST00000448497 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
RFC4-209ENST00000448497 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
RFC4-209ENST00000448497 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
RFC4-209ENST00000448497 UBR1Q8IWV7 1749 aa9.49□□□□□ -0.89
RFC4-209ENST00000448497 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
RFC4-209ENST00000448497 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
RFC4-209ENST00000448497 C3P01024 1663 aa9.48□□□□□ -0.89
RFC4-209ENST00000448497 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
RFC4-209ENST00000448497 TIE1P35590 1138 aa9.48□□□□□ -0.89
RFC4-209ENST00000448497 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
RFC4-209ENST00000448497 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
RFC4-209ENST00000448497 NLRP1Q9C000 1473 aa9.47□□□□□ -0.89
RFC4-209ENST00000448497 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
RFC4-209ENST00000448497 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
RFC4-209ENST00000448497 GALR2O43603 387 aaPredicted RBP9.47□□□□□ -0.89
RFC4-209ENST00000448497 RALBP1Q15311 655 aa9.47□□□□□ -0.89
RFC4-209ENST00000448497 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
RFC4-209ENST00000448497 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
RFC4-209ENST00000448497 NPC1L1Q9UHC9 1359 aa9.47□□□□□ -0.89
RFC4-209ENST00000448497 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
RFC4-209ENST00000448497 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
RFC4-209ENST00000448497 YTHDC1Q96MU7 727 aaKnown RBP9.46□□□□□ -0.9
RFC4-209ENST00000448497 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
RFC4-209ENST00000448497 CENPJQ9HC77 1338 aaPredicted RBP9.46□□□□□ -0.9
RFC4-209ENST00000448497 PARD3Q8TEW0 1356 aa9.46□□□□□ -0.9
RFC4-209ENST00000448497 TNRQ92752 1358 aa9.46□□□□□ -0.9
RFC4-209ENST00000448497 NRXN3Q9Y4C0 1643 aa9.45□□□□□ -0.9
RFC4-209ENST00000448497 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
RFC4-209ENST00000448497 GABBR2O75899 941 aa9.45□□□□□ -0.9
RFC4-209ENST00000448497 RIMS2Q9UQ26 1411 aa9.45□□□□□ -0.9
RFC4-209ENST00000448497 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.44□□□□□ -0.9
RFC4-209ENST00000448497 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
RFC4-209ENST00000448497 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
RFC4-209ENST00000448497 PTPRMP28827 1452 aa9.43□□□□□ -0.9
RFC4-209ENST00000448497 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
RFC4-209ENST00000448497 SLIT1O75093 1534 aa9.42□□□□□ -0.9
RFC4-209ENST00000448497 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
RFC4-209ENST00000448497 INSRP06213 1382 aa9.42□□□□□ -0.9
RFC4-209ENST00000448497 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
RFC4-209ENST00000448497 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
RFC4-209ENST00000448497 MLECQ14165 292 aa9.42□□□□□ -0.9
RFC4-209ENST00000448497 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
RFC4-209ENST00000448497 ADAMTSL3P82987 1691 aa9.42□□□□□ -0.9
RFC4-209ENST00000448497 ARHGAP23Q9P227 1491 aa9.41□□□□□ -0.9
RFC4-209ENST00000448497 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
RFC4-209ENST00000448497 PANK3Q9H999 370 aa9.41□□□□□ -0.9
RFC4-209ENST00000448497 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
RFC4-209ENST00000448497 TULP4Q9NRJ4 1543 aa9.41□□□□□ -0.9
RFC4-209ENST00000448497 TECPR2O15040 1411 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 LRPPRCP42704 1394 aaKnown RBP9.4□□□□□ -0.9
RFC4-209ENST00000448497 ABCC11Q96J66 1382 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 TMEM2Q9UHN6 1383 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
RFC4-209ENST00000448497 SIRT1Q96EB6 747 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms