RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 XRCC6P12956 609 aaKnown RBP eCLIP19.96■□□□□ 0.79
CHRD-205ENST00000448472 STK26Q9P289 416 aa19.96■□□□□ 0.79
CHRD-205ENST00000448472 TRAPPC8Q9Y2L5 1435 aa19.95■□□□□ 0.78
CHRD-205ENST00000448472 NINLQ9Y2I6 1382 aa19.93■□□□□ 0.78
CHRD-205ENST00000448472 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
CHRD-205ENST00000448472 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
CHRD-205ENST00000448472 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
CHRD-205ENST00000448472 ANTXR1Q9H6X2 564 aa19.92■□□□□ 0.78
CHRD-205ENST00000448472 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
CHRD-205ENST00000448472 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
CHRD-205ENST00000448472 CABP2Q9NPB3 220 aa19.91■□□□□ 0.78
CHRD-205ENST00000448472 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
CHRD-205ENST00000448472 NOB1Q9ULX3 412 aaKnown RBP19.9■□□□□ 0.78
CHRD-205ENST00000448472 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.78
CHRD-205ENST00000448472 SSH1Q8WYL5 1049 aa19.89■□□□□ 0.77
CHRD-205ENST00000448472 DDX19BQ9UMR2 479 aa19.89■□□□□ 0.77
CHRD-205ENST00000448472 NPC1L1Q9UHC9 1359 aa19.89■□□□□ 0.77
CHRD-205ENST00000448472 MYO5CQ9NQX4 1742 aa19.89■□□□□ 0.77
CHRD-205ENST00000448472 TTC37Q6PGP7 1564 aa19.88■□□□□ 0.77
CHRD-205ENST00000448472 TRIM27P14373 513 aa19.88■□□□□ 0.77
CHRD-205ENST00000448472 NCLP19338 710 aaKnown RBP19.88■□□□□ 0.77
CHRD-205ENST00000448472 MAST1Q9Y2H9 1570 aa19.87■□□□□ 0.77
CHRD-205ENST00000448472 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
CHRD-205ENST00000448472 AAMPQ13685 434 aa19.87■□□□□ 0.77
CHRD-205ENST00000448472 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
CHRD-205ENST00000448472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRD-205ENST00000448472 UBE2Q2Q8WVN8 375 aa19.86■□□□□ 0.77
CHRD-205ENST00000448472 PREX2Q70Z35 1606 aa19.86■□□□□ 0.77
CHRD-205ENST00000448472 TMEM57Q8N5G2 664 aa19.86■□□□□ 0.77
CHRD-205ENST00000448472 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
CHRD-205ENST00000448472 RIPK4P57078 832 aa19.86■□□□□ 0.77
CHRD-205ENST00000448472 C1orf115Q9H7X2 142 aa19.85■□□□□ 0.77
CHRD-205ENST00000448472 ABCC2Q92887 1545 aa19.85■□□□□ 0.77
CHRD-205ENST00000448472 SYNMO15061 1565 aa19.85■□□□□ 0.77
CHRD-205ENST00000448472 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
CHRD-205ENST00000448472 ATF7IPQ6VMQ6 1270 aa19.85■□□□□ 0.77
CHRD-205ENST00000448472 MRE11P49959 708 aa19.84■□□□□ 0.77
CHRD-205ENST00000448472 GLIPR1L2Q4G1C9 344 aa19.83■□□□□ 0.77
CHRD-205ENST00000448472 GRPEL1Q9HAV7 217 aa19.83■□□□□ 0.77
CHRD-205ENST00000448472 UNC13BO14795 1591 aa19.83■□□□□ 0.77
CHRD-205ENST00000448472 ATP10AO60312 1499 aa19.83■□□□□ 0.76
CHRD-205ENST00000448472 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
CHRD-205ENST00000448472 ANP32BQ92688 251 aaKnown RBP19.82■□□□□ 0.76
CHRD-205ENST00000448472 GBP4Q96PP9 640 aa19.82■□□□□ 0.76
CHRD-205ENST00000448472 IQGAP3Q86VI3 1631 aa19.82■□□□□ 0.76
CHRD-205ENST00000448472 ERVK-7P63135 1459 aa19.82■□□□□ 0.76
CHRD-205ENST00000448472 LAMC1P11047 1609 aa19.81■□□□□ 0.76
CHRD-205ENST00000448472 PLCH2O75038 1416 aa19.81■□□□□ 0.76
CHRD-205ENST00000448472 APBB1O00213 710 aa19.8■□□□□ 0.76
CHRD-205ENST00000448472 TMPOP42166 694 aaKnown RBP19.8■□□□□ 0.76
CHRD-205ENST00000448472 EVC2Q86UK5 1308 aa19.8■□□□□ 0.76
CHRD-205ENST00000448472 NOS1P29475 1434 aa19.79■□□□□ 0.76
CHRD-205ENST00000448472 GOLGA6L22H0YM25 854 aa19.79■□□□□ 0.76
CHRD-205ENST00000448472 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
CHRD-205ENST00000448472 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
CHRD-205ENST00000448472 TNPO1Q92973 898 aaKnown RBP19.78■□□□□ 0.76
CHRD-205ENST00000448472 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
CHRD-205ENST00000448472 MINK1Q8N4C8 1332 aaPredicted RBP19.77■□□□□ 0.76
CHRD-205ENST00000448472 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
CHRD-205ENST00000448472 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
CHRD-205ENST00000448472 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
CHRD-205ENST00000448472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHRD-205ENST00000448472 ESPNB1AK53 854 aa19.75■□□□□ 0.75
CHRD-205ENST00000448472 RBM42Q9BTD8 480 aaKnown RBP19.75■□□□□ 0.75
CHRD-205ENST00000448472 THUMPD2Q9BTF0 503 aaKnown RBP19.75■□□□□ 0.75
CHRD-205ENST00000448472 CHD1LQ86WJ1 897 aa19.75■□□□□ 0.75
CHRD-205ENST00000448472 FBLN1P23142 703 aa19.74■□□□□ 0.75
CHRD-205ENST00000448472 DDX49Q9Y6V7 483 aaKnown RBP19.74■□□□□ 0.75
CHRD-205ENST00000448472 HMOX1P09601 288 aa19.74■□□□□ 0.75
CHRD-205ENST00000448472 PTPRTO14522 1441 aa19.73■□□□□ 0.75
CHRD-205ENST00000448472 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
CHRD-205ENST00000448472 DIAPH1O60610 1272 aaKnown RBP19.72■□□□□ 0.75
CHRD-205ENST00000448472 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
CHRD-205ENST00000448472 NLRP1Q9C000 1473 aa19.72■□□□□ 0.75
CHRD-205ENST00000448472 FSD2A1L4K1 749 aa19.72■□□□□ 0.75
CHRD-205ENST00000448472 KIF16BQ96L93 1317 aa19.71■□□□□ 0.75
CHRD-205ENST00000448472 CLCN1P35523 988 aa19.71■□□□□ 0.75
CHRD-205ENST00000448472 CLTCL1P53675 1640 aa19.7■□□□□ 0.74
CHRD-205ENST00000448472 RNF17Q9BXT8 1623 aaKnown RBP19.7■□□□□ 0.74
CHRD-205ENST00000448472 SMC5Q8IY18 1101 aa19.7■□□□□ 0.74
CHRD-205ENST00000448472 PLXNC1O60486 1568 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 TRPM2O94759 1503 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 IQGAP1P46940 1657 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 FOXD4L5Q5VV16 416 aaPredicted RBP19.69■□□□□ 0.74
CHRD-205ENST00000448472 FOXD4L4Q8WXT5 416 aaPredicted RBP19.69■□□□□ 0.74
CHRD-205ENST00000448472 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
CHRD-205ENST00000448472 SSFA2P28290 1259 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 TRIM35Q9UPQ4 493 aa19.69■□□□□ 0.74
CHRD-205ENST00000448472 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
CHRD-205ENST00000448472 CFAP65Q6ZU64 1925 aaKnown RBP19.68■□□□□ 0.74
CHRD-205ENST00000448472 PRKAR2BP31323 418 aa19.68■□□□□ 0.74
CHRD-205ENST00000448472 TPRNQ4KMQ1 711 aa19.68■□□□□ 0.74
CHRD-205ENST00000448472 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
CHRD-205ENST00000448472 TERF2IPQ9NYB0 399 aa19.68■□□□□ 0.74
CHRD-205ENST00000448472 GAS2L3Q86XJ1 694 aa19.67■□□□□ 0.74
CHRD-205ENST00000448472 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
CHRD-205ENST00000448472 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
CHRD-205ENST00000448472 NUCB1Q02818 461 aa19.67■□□□□ 0.74
CHRD-205ENST00000448472 MSNP26038 577 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms