RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHC1-210ENST00000448116 GSE1Q14687 1217 aa16.57■□□□□ 0.24
SHC1-210ENST00000448116 MYOM1P52179 1685 aa16.57■□□□□ 0.24
SHC1-210ENST00000448116 FRAT2O75474 233 aaPredicted RBP16.57■□□□□ 0.24
SHC1-210ENST00000448116 RARSP54136 660 aaKnown RBP16.57■□□□□ 0.24
SHC1-210ENST00000448116 STK26Q9P289 416 aa16.57■□□□□ 0.24
SHC1-210ENST00000448116 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
SHC1-210ENST00000448116 SEC24BO95487 1268 aa16.57■□□□□ 0.24
SHC1-210ENST00000448116 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
SHC1-210ENST00000448116 CFAP65Q6ZU64 1925 aaKnown RBP16.56■□□□□ 0.24
SHC1-210ENST00000448116 RLBP1P12271 317 aa16.55■□□□□ 0.24
SHC1-210ENST00000448116 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
SHC1-210ENST00000448116 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
SHC1-210ENST00000448116 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
SHC1-210ENST00000448116 ABCA6Q8N139 1617 aa16.55■□□□□ 0.24
SHC1-210ENST00000448116 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
SHC1-210ENST00000448116 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
SHC1-210ENST00000448116 MYOM2P54296 1465 aa16.53■□□□□ 0.24
SHC1-210ENST00000448116 PDE4CQ08493 712 aa16.53■□□□□ 0.24
SHC1-210ENST00000448116 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
SHC1-210ENST00000448116 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
SHC1-210ENST00000448116 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
SHC1-210ENST00000448116 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
SHC1-210ENST00000448116 DEPDC5O75140 1603 aa16.51■□□□□ 0.23
SHC1-210ENST00000448116 SRPK2P78362 688 aaKnown RBP16.51■□□□□ 0.23
SHC1-210ENST00000448116 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
SHC1-210ENST00000448116 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
SHC1-210ENST00000448116 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
SHC1-210ENST00000448116 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 VWDEQ8N2E2 1590 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
SHC1-210ENST00000448116 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
SHC1-210ENST00000448116 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
SHC1-210ENST00000448116 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
SHC1-210ENST00000448116 KIF1BO60333 1816 aa16.48■□□□□ 0.23
SHC1-210ENST00000448116 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
SHC1-210ENST00000448116 BECN1Q14457 450 aa16.48■□□□□ 0.23
SHC1-210ENST00000448116 RWDD1Q9H446 243 aaPredicted RBP16.48■□□□□ 0.23
SHC1-210ENST00000448116 USP19O94966 1318 aa16.48■□□□□ 0.23
SHC1-210ENST00000448116 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
SHC1-210ENST00000448116 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
SHC1-210ENST00000448116 NPATQ14207 1427 aa16.47■□□□□ 0.23
SHC1-210ENST00000448116 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
SHC1-210ENST00000448116 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
SHC1-210ENST00000448116 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
SHC1-210ENST00000448116 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
SHC1-210ENST00000448116 MROH1Q8NDA8 1641 aa16.46■□□□□ 0.23
SHC1-210ENST00000448116 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
SHC1-210ENST00000448116 PDIA4P13667 645 aaKnown RBP16.46■□□□□ 0.22
SHC1-210ENST00000448116 ZKSCAN2Q63HK3 967 aa16.45■□□□□ 0.22
SHC1-210ENST00000448116 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
SHC1-210ENST00000448116 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
SHC1-210ENST00000448116 MROH2AA6NES4 1674 aa16.44■□□□□ 0.22
SHC1-210ENST00000448116 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
SHC1-210ENST00000448116 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
SHC1-210ENST00000448116 DZIP1LQ8IYY4 767 aaKnown RBP16.44■□□□□ 0.22
SHC1-210ENST00000448116 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
SHC1-210ENST00000448116 ZNF518AQ6AHZ1 1483 aa16.43■□□□□ 0.22
SHC1-210ENST00000448116 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
SHC1-210ENST00000448116 POGKQ9P215 609 aa16.43■□□□□ 0.22
SHC1-210ENST00000448116 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
SHC1-210ENST00000448116 MVPQ14764 893 aaKnown RBP16.43■□□□□ 0.22
SHC1-210ENST00000448116 IDI1Q13907 227 aa16.42■□□□□ 0.22
SHC1-210ENST00000448116 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
SHC1-210ENST00000448116 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
SHC1-210ENST00000448116 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
SHC1-210ENST00000448116 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
SHC1-210ENST00000448116 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
SHC1-210ENST00000448116 ARXQ96QS3 562 aa16.4■□□□□ 0.22
SHC1-210ENST00000448116 ANKRD36BQ8N2N9 1353 aa16.4■□□□□ 0.22
SHC1-210ENST00000448116 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
SHC1-210ENST00000448116 ADGRB3O60242 1522 aa16.39■□□□□ 0.21
SHC1-210ENST00000448116 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
SHC1-210ENST00000448116 RIPK4P57078 832 aa16.39■□□□□ 0.21
SHC1-210ENST00000448116 AAMPQ13685 434 aa16.38■□□□□ 0.21
SHC1-210ENST00000448116 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
SHC1-210ENST00000448116 NEURL4Q96JN8 1562 aa16.38■□□□□ 0.21
SHC1-210ENST00000448116 TRIM27P14373 513 aa16.38■□□□□ 0.21
SHC1-210ENST00000448116 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
SHC1-210ENST00000448116 FBLN1P23142 703 aa16.37■□□□□ 0.21
SHC1-210ENST00000448116 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 TBC1D32Q96NH3 1257 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHC1-210ENST00000448116 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
SHC1-210ENST00000448116 FYB1O15117 783 aa16.35■□□□□ 0.21
SHC1-210ENST00000448116 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
SHC1-210ENST00000448116 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
SHC1-210ENST00000448116 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
SHC1-210ENST00000448116 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
SHC1-210ENST00000448116 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
SHC1-210ENST00000448116 LMTK2Q8IWU2 1503 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms