RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 SAFB2Q14151 953 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC18-205ENST00000447456 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
CCDC18-205ENST00000447456 TMF1P82094 1093 aa12.89□□□□□ -0.35
CCDC18-205ENST00000447456 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
CCDC18-205ENST00000447456 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
CCDC18-205ENST00000447456 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
CCDC18-205ENST00000447456 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
CCDC18-205ENST00000447456 PLEKHH1Q9ULM0 1364 aa12.87□□□□□ -0.35
CCDC18-205ENST00000447456 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
CCDC18-205ENST00000447456 TESK2Q96S53 571 aa12.86□□□□□ -0.35
CCDC18-205ENST00000447456 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
CCDC18-205ENST00000447456 ADGRL3Q9HAR2 1447 aa12.86□□□□□ -0.35
CCDC18-205ENST00000447456 MSH6P52701 1360 aa12.85□□□□□ -0.35
CCDC18-205ENST00000447456 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
CCDC18-205ENST00000447456 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
CCDC18-205ENST00000447456 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
CCDC18-205ENST00000447456 ATF3P18847 181 aa12.84□□□□□ -0.35
CCDC18-205ENST00000447456 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
CCDC18-205ENST00000447456 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
CCDC18-205ENST00000447456 DCCP43146 1447 aa12.83□□□□□ -0.36
CCDC18-205ENST00000447456 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
CCDC18-205ENST00000447456 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
CCDC18-205ENST00000447456 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.36
CCDC18-205ENST00000447456 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
CCDC18-205ENST00000447456 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
CCDC18-205ENST00000447456 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
CCDC18-205ENST00000447456 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
CCDC18-205ENST00000447456 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
CCDC18-205ENST00000447456 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
CCDC18-205ENST00000447456 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
CCDC18-205ENST00000447456 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
CCDC18-205ENST00000447456 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
CCDC18-205ENST00000447456 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
CCDC18-205ENST00000447456 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
CCDC18-205ENST00000447456 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
CCDC18-205ENST00000447456 NUDT16Q96DE0 195 aaKnown RBP12.78□□□□□ -0.36
CCDC18-205ENST00000447456 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
CCDC18-205ENST00000447456 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
CCDC18-205ENST00000447456 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
CCDC18-205ENST00000447456 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
CCDC18-205ENST00000447456 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
CCDC18-205ENST00000447456 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
CCDC18-205ENST00000447456 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
CCDC18-205ENST00000447456 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
CCDC18-205ENST00000447456 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
CCDC18-205ENST00000447456 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
CCDC18-205ENST00000447456 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
CCDC18-205ENST00000447456 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
CCDC18-205ENST00000447456 TOM1O60784 492 aa12.74□□□□□ -0.37
CCDC18-205ENST00000447456 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
CCDC18-205ENST00000447456 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
CCDC18-205ENST00000447456 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
CCDC18-205ENST00000447456 ATP7BP35670 1465 aa12.73□□□□□ -0.37
CCDC18-205ENST00000447456 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
CCDC18-205ENST00000447456 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
CCDC18-205ENST00000447456 MST1RQ04912 1400 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 PPIP5K1Q6PFW1 1433 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 PLEKHG3A1L390 1219 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
CCDC18-205ENST00000447456 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
CCDC18-205ENST00000447456 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.37
CCDC18-205ENST00000447456 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
CCDC18-205ENST00000447456 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
CCDC18-205ENST00000447456 SLC12A5Q9H2X9 1139 aa12.71□□□□□ -0.37
CCDC18-205ENST00000447456 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
CCDC18-205ENST00000447456 KIF1AQ12756 1690 aa12.69□□□□□ -0.38
CCDC18-205ENST00000447456 TOPAZ1Q8N9V7 1692 aa12.69□□□□□ -0.38
CCDC18-205ENST00000447456 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
CCDC18-205ENST00000447456 ACEP12821 1306 aa12.68□□□□□ -0.38
CCDC18-205ENST00000447456 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
CCDC18-205ENST00000447456 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
CCDC18-205ENST00000447456 RGPD8O14715 1765 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-205ENST00000447456 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
CCDC18-205ENST00000447456 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
CCDC18-205ENST00000447456 PSME1Q06323 249 aa12.67□□□□□ -0.38
CCDC18-205ENST00000447456 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
CCDC18-205ENST00000447456 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
CCDC18-205ENST00000447456 PANK3Q9H999 370 aa12.67□□□□□ -0.38
CCDC18-205ENST00000447456 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
CCDC18-205ENST00000447456 KTN1Q86UP2 1357 aaKnown RBP12.67□□□□□ -0.38
CCDC18-205ENST00000447456 MYOM1P52179 1685 aa12.67□□□□□ -0.38
CCDC18-205ENST00000447456 KNSTRNQ9Y448 316 aa12.66□□□□□ -0.38
CCDC18-205ENST00000447456 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
CCDC18-205ENST00000447456 FOXO3O43524 673 aa12.65□□□□□ -0.38
CCDC18-205ENST00000447456 A0A1W2PP64 1363 aa12.65□□□□□ -0.38
CCDC18-205ENST00000447456 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
CCDC18-205ENST00000447456 EDC4Q6P2E9 1401 aaKnown RBP12.64□□□□□ -0.39
CCDC18-205ENST00000447456 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
CCDC18-205ENST00000447456 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
CCDC18-205ENST00000447456 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
CCDC18-205ENST00000447456 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
CCDC18-205ENST00000447456 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
CCDC18-205ENST00000447456 USP6P35125 1406 aa12.62□□□□□ -0.39
CCDC18-205ENST00000447456 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
CCDC18-205ENST00000447456 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
CCDC18-205ENST00000447456 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
CCDC18-205ENST00000447456 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
CCDC18-205ENST00000447456 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms