RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 MYOM2P54296 1465 aa18.8■□□□□ 0.6
SSR4-205ENST00000447375 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
SSR4-205ENST00000447375 UNC5CLQ8IV45 518 aa18.79■□□□□ 0.6
SSR4-205ENST00000447375 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
SSR4-205ENST00000447375 HRCP23327 699 aa18.78■□□□□ 0.6
SSR4-205ENST00000447375 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
SSR4-205ENST00000447375 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
SSR4-205ENST00000447375 ESCO1Q5FWF5 840 aa18.75■□□□□ 0.59
SSR4-205ENST00000447375 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
SSR4-205ENST00000447375 GLI3P10071 1580 aa18.73■□□□□ 0.59
SSR4-205ENST00000447375 NUP155O75694 1391 aa18.73■□□□□ 0.59
SSR4-205ENST00000447375 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
SSR4-205ENST00000447375 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
SSR4-205ENST00000447375 FOXO3O43524 673 aa18.72■□□□□ 0.59
SSR4-205ENST00000447375 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SSR4-205ENST00000447375 BAG6P46379 1132 aa18.71■□□□□ 0.59
SSR4-205ENST00000447375 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SSR4-205ENST00000447375 SLIT2O94813 1529 aa18.7■□□□□ 0.58
SSR4-205ENST00000447375 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
SSR4-205ENST00000447375 PXDNQ92626 1479 aa18.7■□□□□ 0.58
SSR4-205ENST00000447375 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
SSR4-205ENST00000447375 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
SSR4-205ENST00000447375 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
SSR4-205ENST00000447375 NAIPQ13075 1403 aa18.67■□□□□ 0.58
SSR4-205ENST00000447375 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
SSR4-205ENST00000447375 VPS72Q15906 364 aa18.67■□□□□ 0.58
SSR4-205ENST00000447375 YY1P25490 414 aa18.66■□□□□ 0.58
SSR4-205ENST00000447375 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SSR4-205ENST00000447375 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
SSR4-205ENST00000447375 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.58
SSR4-205ENST00000447375 R3HDM1Q15032 1099 aaKnown RBP18.64■□□□□ 0.57
SSR4-205ENST00000447375 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
SSR4-205ENST00000447375 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
SSR4-205ENST00000447375 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SSR4-205ENST00000447375 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
SSR4-205ENST00000447375 A0A0G2JS52 829 aa18.61■□□□□ 0.57
SSR4-205ENST00000447375 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
SSR4-205ENST00000447375 MYT1Q01538 1121 aa18.61■□□□□ 0.57
SSR4-205ENST00000447375 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
SSR4-205ENST00000447375 KIF1BO60333 1816 aa18.59■□□□□ 0.57
SSR4-205ENST00000447375 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
SSR4-205ENST00000447375 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
SSR4-205ENST00000447375 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
SSR4-205ENST00000447375 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
SSR4-205ENST00000447375 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
SSR4-205ENST00000447375 CABLES1Q8TDN4 633 aa18.56■□□□□ 0.56
SSR4-205ENST00000447375 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
SSR4-205ENST00000447375 CCDC144AA2RUR9 1427 aa18.53■□□□□ 0.56
SSR4-205ENST00000447375 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
SSR4-205ENST00000447375 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
SSR4-205ENST00000447375 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
SSR4-205ENST00000447375 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
SSR4-205ENST00000447375 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
SSR4-205ENST00000447375 PSME1Q06323 249 aa18.51■□□□□ 0.55
SSR4-205ENST00000447375 STK26Q9P289 416 aa18.5■□□□□ 0.55
SSR4-205ENST00000447375 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
SSR4-205ENST00000447375 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SSR4-205ENST00000447375 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SSR4-205ENST00000447375 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
SSR4-205ENST00000447375 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
SSR4-205ENST00000447375 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
SSR4-205ENST00000447375 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
SSR4-205ENST00000447375 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
SSR4-205ENST00000447375 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
SSR4-205ENST00000447375 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
SSR4-205ENST00000447375 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
SSR4-205ENST00000447375 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
SSR4-205ENST00000447375 PPLO60437 1756 aa18.45■□□□□ 0.54
SSR4-205ENST00000447375 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
SSR4-205ENST00000447375 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
SSR4-205ENST00000447375 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
SSR4-205ENST00000447375 TRIM37O94972 964 aa18.43■□□□□ 0.54
SSR4-205ENST00000447375 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SSR4-205ENST00000447375 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
SSR4-205ENST00000447375 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
SSR4-205ENST00000447375 TECPR2O15040 1411 aa18.41■□□□□ 0.54
SSR4-205ENST00000447375 APBA3O96018 575 aa18.41■□□□□ 0.54
SSR4-205ENST00000447375 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
SSR4-205ENST00000447375 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
SSR4-205ENST00000447375 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
SSR4-205ENST00000447375 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
SSR4-205ENST00000447375 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
SSR4-205ENST00000447375 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
SSR4-205ENST00000447375 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
SSR4-205ENST00000447375 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
SSR4-205ENST00000447375 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
SSR4-205ENST00000447375 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
SSR4-205ENST00000447375 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
SSR4-205ENST00000447375 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
SSR4-205ENST00000447375 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
SSR4-205ENST00000447375 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SSR4-205ENST00000447375 KCNQ2O43526 872 aa18.36■□□□□ 0.53
SSR4-205ENST00000447375 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
SSR4-205ENST00000447375 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
SSR4-205ENST00000447375 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
SSR4-205ENST00000447375 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
SSR4-205ENST00000447375 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
SSR4-205ENST00000447375 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
SSR4-205ENST00000447375 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
SSR4-205ENST00000447375 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms