RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 CLSTN1O94985 981 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 SYNE3Q6ZMZ3 975 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 CD109Q6YHK3 1445 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 SKOR2Q2VWA4 1001 aaPredicted RBP8.61□□□□□ -1.03
CDK12-202ENST00000447079 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 SLKQ9H2G2 1235 aaPredicted RBP8.61□□□□□ -1.03
CDK12-202ENST00000447079 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
CDK12-202ENST00000447079 ERC2O15083 957 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 ZKSCAN1P17029 563 aaPredicted RBP8.6□□□□□ -1.03
CDK12-202ENST00000447079 PPP6R1Q9UPN7 881 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
CDK12-202ENST00000447079 TEX14Q8IWB6 1497 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 ADAMTS12P58397 1594 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 PLB1Q6P1J6 1458 aa8.6□□□□□ -1.03
CDK12-202ENST00000447079 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 TSPYL4Q9UJ04 414 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 DUOX2Q9NRD8 1548 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 H3BQV1 296 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 G3BP1Q13283 466 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■■□□ 15.3
CDK12-202ENST00000447079 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 APAF1O14727 1248 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
CDK12-202ENST00000447079 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
CDK12-202ENST00000447079 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
CDK12-202ENST00000447079 RASSF8Q8NHQ8 419 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 PLEKHO1Q53GL0 409 aaPredicted RBP8.58□□□□□ -1.04
CDK12-202ENST00000447079 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 RTEL1-TNFRSF6BF6WH68 1400 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 PNISRQ8TF01 805 aaKnown RBP8.58□□□□□ -1.04
CDK12-202ENST00000447079 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
CDK12-202ENST00000447079 HOOK1Q9UJC3 728 aaKnown RBP8.58□□□□□ -1.04
CDK12-202ENST00000447079 MTERF4Q7Z6M4 381 aaKnown RBP8.57□□□□□ -1.04
CDK12-202ENST00000447079 MAP7D2Q96T17 732 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 NAIPQ13075 1403 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 RILPL2Q969X0 211 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 KIAA0556O60303 1618 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
CDK12-202ENST00000447079 SF3A1Q15459 793 aaKnown RBP8.57□□□□□ -1.04
CDK12-202ENST00000447079 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
CDK12-202ENST00000447079 ABTB2Q8N961 1025 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 TRDNQ13061 729 aa8.57□□□□□ -1.04
CDK12-202ENST00000447079 TPM2P07951 284 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 FANCAO15360 1455 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 NLRP6P59044 892 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 TRIM29Q14134 588 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 HIP1O00291 1037 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 SETQ01105 290 aaPredicted RBP8.56□□□□□ -1.04
CDK12-202ENST00000447079 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 MYO5CQ9NQX4 1742 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 TOMM22Q9NS69 142 aa8.56□□□□□ -1.04
CDK12-202ENST00000447079 DENND4BO75064 1496 aaPredicted RBP8.55□□□□□ -1.04
CDK12-202ENST00000447079 EIF2S2P20042 333 aaKnown RBP8.55□□□□□ -1.04
CDK12-202ENST00000447079 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.55□□□□□ -1.04
CDK12-202ENST00000447079 GNAI3P08754 354 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 ERC1Q8IUD2 1116 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 EIF4G3O43432 1585 aaKnown RBP8.55□□□□□ -1.04
CDK12-202ENST00000447079 MARCH6O60337 910 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 PRAM1Q96QH2 718 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 ERICH2A1L162 156 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
CDK12-202ENST00000447079 ZNF771Q7L3S4 317 aaPredicted RBP8.54□□□□□ -1.04
CDK12-202ENST00000447079 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
CDK12-202ENST00000447079 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
CDK12-202ENST00000447079 TPM1P09493 284 aa8.54□□□□□ -1.04
CDK12-202ENST00000447079 CCDC47Q96A33 483 aaKnown RBP8.54□□□□□ -1.04
CDK12-202ENST00000447079 PROSER2Q86WR7 435 aaPredicted RBP8.54□□□□□ -1.04
CDK12-202ENST00000447079 CDK19Q9BWU1 502 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 UBTFL1P0CB47 393 aaPredicted RBP8.53□□□□□ -1.04
CDK12-202ENST00000447079 MTHFSP49914 203 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 WDR63Q8IWG1 891 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 TPM3P06753 285 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
CDK12-202ENST00000447079 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 NLRP2Q9NX02 1062 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 COG6Q9Y2V7 657 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 SYTL4Q96C24 671 aaPredicted RBP8.53□□□□□ -1.04
CDK12-202ENST00000447079 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
CDK12-202ENST00000447079 TCEAL9Q9UHQ7 104 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 ABCC5O15440 1437 aa8.53□□□□□ -1.04
CDK12-202ENST00000447079 NCOA1Q15788 1441 aa8.52□□□□□ -1.04
CDK12-202ENST00000447079 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 NSD2O96028 1365 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 NOC3LQ8WTT2 800 aaKnown RBP8.52□□□□□ -1.05
CDK12-202ENST00000447079 BCL2L13Q9BXK5 485 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms