RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 ICE2Q659A1 982 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 ZNF280DQ6N043 979 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 PPP4R3CPQ6ZMV5 832 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 IPO7O95373 1038 aaKnown RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 MRE11P49959 708 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 CCT2P78371 535 aaKnown RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 FOXD4Q12950 439 aaPredicted RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 LRCH2Q5VUJ6 765 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 SLC26A8Q96RN1 970 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 NINLQ9Y2I6 1382 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 RAD50Q92878 1312 aa10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 GABPB1Q06547 395 aaPredicted RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
MCF2L2-203ENST00000447025 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 TRIM52Q96A61 297 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 LIG1P18858 919 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 PAX7P23759 505 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 BIRC2Q13490 618 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 GET4Q7L5D6 327 aaPredicted RBP10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 PANK2Q9BZ23 570 aa10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
MCF2L2-203ENST00000447025 ERCC3P19447 782 aa10.65□□□□□ -0.7
MCF2L2-203ENST00000447025 SUDS3Q9H7L9 328 aaPredicted RBP10.65□□□□□ -0.7
MCF2L2-203ENST00000447025 KNSTRNQ9Y448 316 aa10.65□□□□□ -0.7
MCF2L2-203ENST00000447025 DNAJC21Q5F1R6 531 aaKnown RBP10.65□□□□□ -0.71
MCF2L2-203ENST00000447025 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 RHBDL3P58872 404 aa10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 KRBA2Q6ZNG9 492 aa10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 SUFUQ9UMX1 484 aa10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
MCF2L2-203ENST00000447025 CD151P48509 253 aa10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 CXorf38Q8TB03 319 aa10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
MCF2L2-203ENST00000447025 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 TPM3P06753 285 aa10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 NEFHP12036 1026 aa10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 ZSCAN30Q86W11 494 aa10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
MCF2L2-203ENST00000447025 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
MCF2L2-203ENST00000447025 ATP2B3Q16720 1220 aa10.61□□□□□ -0.71
MCF2L2-203ENST00000447025 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
MCF2L2-203ENST00000447025 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
MCF2L2-203ENST00000447025 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
MCF2L2-203ENST00000447025 MS4A1P11836 297 aa10.6□□□□□ -0.71
MCF2L2-203ENST00000447025 PDE4AP27815 886 aa10.6□□□□□ -0.71
MCF2L2-203ENST00000447025 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
MCF2L2-203ENST00000447025 RSPH14Q9UHP6 348 aa10.6□□□□□ -0.71
MCF2L2-203ENST00000447025 ANKRD33BA6NCL7 494 aa10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 EPB41L2O43491 1005 aaKnown RBP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 TRDNQ13061 729 aa10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 SASS6Q6UVJ0 657 aa10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 RANBP17Q9H2T7 1088 aaKnown RBP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 RBM5P52756 815 aaKnown RBP eCLIP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
MCF2L2-203ENST00000447025 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 TMCO4Q5TGY1 634 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 CREBRFQ8IUR6 639 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 ACRBPQ8NEB7 543 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 KCNV2Q8TDN2 545 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 TNPO1Q92973 898 aaKnown RBP10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 PPME1Q9Y570 386 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 CFTRP13569 1480 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 MARCH6O60337 910 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
MCF2L2-203ENST00000447025 ERBB3P21860 1342 aa10.57□□□□□ -0.72
MCF2L2-203ENST00000447025 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
MCF2L2-203ENST00000447025 MAF1Q9H063 256 aa10.57□□□□□ -0.72
MCF2L2-203ENST00000447025 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
MCF2L2-203ENST00000447025 ABCD1P33897 745 aa10.57□□□□□ -0.72
MCF2L2-203ENST00000447025 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 H0YHG0 523 aa10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 ZRANB2O95218 330 aaKnown RBP eCLIP10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 TNNT1P13805 278 aa10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 SARNPP82979 210 aaKnown RBP10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
MCF2L2-203ENST00000447025 SLFN14P0C7P3 912 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 SYNPO2Q9UMS6 1093 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 CDC37Q16543 378 aaPredicted RBP10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 KLHL23Q8NBE8 558 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms