RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 MDM2Q00987 491 aaPredicted RBP9.95□□□□□ -0.82
LINC00440-201ENST00000446579 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
LINC00440-201ENST00000446579 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
LINC00440-201ENST00000446579 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
LINC00440-201ENST00000446579 CD46P15529 392 aa9.93□□□□□ -0.82
LINC00440-201ENST00000446579 Q3C1V9 767 aa9.93□□□□□ -0.82
LINC00440-201ENST00000446579 ZNF775Q96BV0 537 aaPredicted RBP9.93□□□□□ -0.82
LINC00440-201ENST00000446579 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
LINC00440-201ENST00000446579 KDM4AO75164 1064 aa9.92□□□□□ -0.82
LINC00440-201ENST00000446579 MSS51Q4VC12 460 aa9.92□□□□□ -0.82
LINC00440-201ENST00000446579 CYP4X1Q8N118 509 aa9.92□□□□□ -0.82
LINC00440-201ENST00000446579 POTECB2RU33 542 aa9.9□□□□□ -0.82
LINC00440-201ENST00000446579 TTC24A2A3L6 582 aaPredicted RBP9.88□□□□□ -0.83
LINC00440-201ENST00000446579 HLA-CQ95604 372 aa9.88□□□□□ -0.83
LINC00440-201ENST00000446579 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
LINC00440-201ENST00000446579 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
LINC00440-201ENST00000446579 USB1Q9BQ65 265 aaKnown RBP9.87□□□□□ -0.83
LINC00440-201ENST00000446579 CLCN1P35523 988 aa9.86□□□□□ -0.83
LINC00440-201ENST00000446579 USP46P62068 366 aa9.86□□□□□ -0.83
LINC00440-201ENST00000446579 AK7Q96M32 723 aa9.86□□□□□ -0.83
LINC00440-201ENST00000446579 TOR4AQ9NXH8 423 aa9.86□□□□□ -0.83
LINC00440-201ENST00000446579 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
LINC00440-201ENST00000446579 MMP16P51512 607 aa9.84□□□□□ -0.83
LINC00440-201ENST00000446579 TRIM32Q13049 653 aa9.84□□□□□ -0.83
LINC00440-201ENST00000446579 AXIN1O15169 862 aa9.83□□□□□ -0.84
LINC00440-201ENST00000446579 HOXA2O43364 376 aa9.83□□□□□ -0.84
LINC00440-201ENST00000446579 GUCA2AQ02747 115 aa9.83□□□□□ -0.84
LINC00440-201ENST00000446579 AMHR2Q16671 573 aa9.83□□□□□ -0.84
LINC00440-201ENST00000446579 NUTM1Q86Y26 1132 aa9.83□□□□□ -0.84
LINC00440-201ENST00000446579 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
LINC00440-201ENST00000446579 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
LINC00440-201ENST00000446579 SLC24A3Q9HC58 644 aa9.81□□□□□ -0.84
LINC00440-201ENST00000446579 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
LINC00440-201ENST00000446579 WNT7AO00755 349 aa9.8□□□□□ -0.84
LINC00440-201ENST00000446579 TRIM66O15016 1216 aa9.8□□□□□ -0.84
LINC00440-201ENST00000446579 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
LINC00440-201ENST00000446579 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
LINC00440-201ENST00000446579 AVPP01185 164 aa9.79□□□□□ -0.84
LINC00440-201ENST00000446579 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
LINC00440-201ENST00000446579 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
LINC00440-201ENST00000446579 CTC1Q2NKJ3 1217 aa9.78□□□□□ -0.84
LINC00440-201ENST00000446579 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
LINC00440-201ENST00000446579 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
LINC00440-201ENST00000446579 GTF3C3Q9Y5Q9 886 aa9.78□□□□□ -0.84
LINC00440-201ENST00000446579 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
LINC00440-201ENST00000446579 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
LINC00440-201ENST00000446579 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
LINC00440-201ENST00000446579 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
LINC00440-201ENST00000446579 J3QL48 77 aa9.75□□□□□ -0.85
LINC00440-201ENST00000446579 SMPD1P17405 629 aa9.75□□□□□ -0.85
LINC00440-201ENST00000446579 JUNDP17535 347 aa9.75□□□□□ -0.85
LINC00440-201ENST00000446579 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
LINC00440-201ENST00000446579 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
LINC00440-201ENST00000446579 FDX1P10109 184 aa9.74□□□□□ -0.85
LINC00440-201ENST00000446579 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
LINC00440-201ENST00000446579 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
LINC00440-201ENST00000446579 PDE4DQ08499 809 aa9.73□□□□□ -0.85
LINC00440-201ENST00000446579 GIGYF2Q6Y7W6 1299 aaKnown RBP9.73□□□□□ -0.85
LINC00440-201ENST00000446579 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
LINC00440-201ENST00000446579 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
LINC00440-201ENST00000446579 NUDT12Q9BQG2 462 aa9.73□□□□□ -0.85
LINC00440-201ENST00000446579 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
LINC00440-201ENST00000446579 WNT7BP56706 349 aa9.71□□□□□ -0.86
LINC00440-201ENST00000446579 SKOR1P84550 965 aa9.71□□□□□ -0.86
LINC00440-201ENST00000446579 HPS1Q92902 700 aa9.7□□□□□ -0.86
LINC00440-201ENST00000446579 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
LINC00440-201ENST00000446579 ALDH1A1P00352 501 aa9.69□□□□□ -0.86
LINC00440-201ENST00000446579 NDUFV2P19404 249 aa9.69□□□□□ -0.86
LINC00440-201ENST00000446579 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
LINC00440-201ENST00000446579 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
LINC00440-201ENST00000446579 MS4A1P11836 297 aa9.68□□□□□ -0.86
LINC00440-201ENST00000446579 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
LINC00440-201ENST00000446579 ATP13A2Q9NQ11 1180 aa9.68□□□□□ -0.86
LINC00440-201ENST00000446579 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
LINC00440-201ENST00000446579 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
LINC00440-201ENST00000446579 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
LINC00440-201ENST00000446579 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
LINC00440-201ENST00000446579 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
LINC00440-201ENST00000446579 WFS1O76024 890 aa9.64□□□□□ -0.87
LINC00440-201ENST00000446579 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
LINC00440-201ENST00000446579 SENP2Q9HC62 589 aa9.64□□□□□ -0.87
LINC00440-201ENST00000446579 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
LINC00440-201ENST00000446579 SNRPBP14678 240 aaKnown RBP9.63□□□□□ -0.87
LINC00440-201ENST00000446579 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
LINC00440-201ENST00000446579 MTMR2Q13614 643 aa9.62□□□□□ -0.87
LINC00440-201ENST00000446579 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
LINC00440-201ENST00000446579 SH3BP2P78314 561 aa9.61□□□□□ -0.87
LINC00440-201ENST00000446579 PTPRNQ16849 979 aa9.61□□□□□ -0.87
LINC00440-201ENST00000446579 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
LINC00440-201ENST00000446579 TRIM47Q96LD4 638 aa9.6□□□□□ -0.87
LINC00440-201ENST00000446579 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
LINC00440-201ENST00000446579 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
LINC00440-201ENST00000446579 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
LINC00440-201ENST00000446579 SIAH2O43255 324 aa9.59□□□□□ -0.87
LINC00440-201ENST00000446579 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
LINC00440-201ENST00000446579 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
LINC00440-201ENST00000446579 BAP1Q92560 729 aa9.59□□□□□ -0.87
LINC00440-201ENST00000446579 KIFC2Q96AC6 838 aa9.59□□□□□ -0.87
LINC00440-201ENST00000446579 CTHP32929 405 aa9.58□□□□□ -0.88
LINC00440-201ENST00000446579 GJA5P36382 358 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms