RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
HMGB1P48-201ENST00000446155 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.94
HMGB1P48-201ENST00000446155 HCSTQ9UBK5 93 aa9.21□□□□□ -0.94
HMGB1P48-201ENST00000446155 NR1I2O75469 434 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 RFC5P40937 340 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 RNF19BQ6ZMZ0 732 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 MTRQ99707 1265 aa9.2□□□□□ -0.94
HMGB1P48-201ENST00000446155 Q3C1V9 767 aa9.19□□□□□ -0.94
HMGB1P48-201ENST00000446155 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
HMGB1P48-201ENST00000446155 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
HMGB1P48-201ENST00000446155 MTMR2Q13614 643 aa9.18□□□□□ -0.94
HMGB1P48-201ENST00000446155 COPS2P61201 443 aa9.17□□□□□ -0.94
HMGB1P48-201ENST00000446155 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
HMGB1P48-201ENST00000446155 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
HMGB1P48-201ENST00000446155 ZPR1O75312 459 aa9.16□□□□□ -0.94
HMGB1P48-201ENST00000446155 ZNF516Q92618 1163 aa9.16□□□□□ -0.94
HMGB1P48-201ENST00000446155 IL21Q9HBE4 155 aa9.16□□□□□ -0.94
HMGB1P48-201ENST00000446155 C6orf229H3BNL8 230 aa9.15□□□□□ -0.94
HMGB1P48-201ENST00000446155 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P48-201ENST00000446155 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P48-201ENST00000446155 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 USB1Q9BQ65 265 aaKnown RBP9.14□□□□□ -0.95
HMGB1P48-201ENST00000446155 TLL1O43897 1013 aa9.13□□□□□ -0.95
HMGB1P48-201ENST00000446155 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
HMGB1P48-201ENST00000446155 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P48-201ENST00000446155 PRR7Q8TB68 274 aa9.13□□□□□ -0.95
HMGB1P48-201ENST00000446155 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P48-201ENST00000446155 ADH1BP00325 375 aa9.12□□□□□ -0.95
HMGB1P48-201ENST00000446155 DESI1Q6ICB0 168 aa9.12□□□□□ -0.95
HMGB1P48-201ENST00000446155 MCM6Q14566 821 aa9.11□□□□□ -0.95
HMGB1P48-201ENST00000446155 SPSB2Q99619 263 aa9.11□□□□□ -0.95
HMGB1P48-201ENST00000446155 SOCS7O14512 581 aa9.1□□□□□ -0.95
HMGB1P48-201ENST00000446155 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
HMGB1P48-201ENST00000446155 USP17L8P0C7I0 530 aa9.09□□□□□ -0.95
HMGB1P48-201ENST00000446155 MMP16P51512 607 aa9.09□□□□□ -0.95
HMGB1P48-201ENST00000446155 FLIIQ13045 1269 aa9.09□□□□□ -0.95
HMGB1P48-201ENST00000446155 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
HMGB1P48-201ENST00000446155 AP1G2O75843 785 aa9.08□□□□□ -0.96
HMGB1P48-201ENST00000446155 JUNDP17535 347 aa9.08□□□□□ -0.96
HMGB1P48-201ENST00000446155 CTDSPL2Q05D32 466 aa9.08□□□□□ -0.96
HMGB1P48-201ENST00000446155 HELBQ8NG08 1087 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P48-201ENST00000446155 SNRKQ9NRH2 765 aa9.08□□□□□ -0.96
HMGB1P48-201ENST00000446155 PER1O15534 1290 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P48-201ENST00000446155 KCNC4Q03721 635 aa9.07□□□□□ -0.96
HMGB1P48-201ENST00000446155 LYPD8Q6UX82 237 aa9.07□□□□□ -0.96
HMGB1P48-201ENST00000446155 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
HMGB1P48-201ENST00000446155 PRDM9Q9NQV7 894 aa9.07□□□□□ -0.96
HMGB1P48-201ENST00000446155 PTPRNQ16849 979 aa9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 LRRN4Q8WUT4 740 aa9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 SLC6A16Q9GZN6 736 aa9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 HMX1Q9NP08 348 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
HMGB1P48-201ENST00000446155 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P48-201ENST00000446155 TRIM34Q9BYJ4 488 aa9.03□□□□□ -0.96
HMGB1P48-201ENST00000446155 GPR37L1O60883 481 aa9.02□□□□□ -0.97
HMGB1P48-201ENST00000446155 S1PR4O95977 384 aa9.02□□□□□ -0.97
HMGB1P48-201ENST00000446155 TSC1Q92574 1164 aa9.02□□□□□ -0.97
HMGB1P48-201ENST00000446155 CCNYL3P0C7X3 344 aa8.99□□□□□ -0.97
HMGB1P48-201ENST00000446155 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
HMGB1P48-201ENST00000446155 EPS8L1Q8TE68 723 aa8.98□□□□□ -0.97
HMGB1P48-201ENST00000446155 NUDT12Q9BQG2 462 aa8.98□□□□□ -0.97
HMGB1P48-201ENST00000446155 EVA1BQ9NVM1 165 aa8.98□□□□□ -0.97
HMGB1P48-201ENST00000446155 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
HMGB1P48-201ENST00000446155 C14orf37Q86TY3 774 aa8.97□□□□□ -0.97
HMGB1P48-201ENST00000446155 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
HMGB1P48-201ENST00000446155 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
HMGB1P48-201ENST00000446155 A6NJR5 290 aa8.96□□□□□ -0.98
HMGB1P48-201ENST00000446155 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
HMGB1P48-201ENST00000446155 UBTFP17480 764 aaKnown RBP8.96□□□□□ -0.98
HMGB1P48-201ENST00000446155 NR6A1Q15406 480 aa8.96□□□□□ -0.98
HMGB1P48-201ENST00000446155 APBB1O00213 710 aa8.95□□□□□ -0.98
HMGB1P48-201ENST00000446155 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
HMGB1P48-201ENST00000446155 PPP1R18Q6NYC8 613 aa8.95□□□□□ -0.98
HMGB1P48-201ENST00000446155 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
HMGB1P48-201ENST00000446155 FCF1Q9Y324 198 aaKnown RBP8.95□□□□□ -0.98
HMGB1P48-201ENST00000446155 PTCRAQ6ISU1 281 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P48-201ENST00000446155 ANKLE1Q8NAG6 615 aa8.94□□□□□ -0.98
HMGB1P48-201ENST00000446155 CLUAP1Q96AJ1 413 aa8.94□□□□□ -0.98
HMGB1P48-201ENST00000446155 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
HMGB1P48-201ENST00000446155 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.94□□□□□ -0.98
HMGB1P48-201ENST00000446155 PPEF1O14829 653 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P48-201ENST00000446155 PLA2G2CQ5R387 149 aa8.93□□□□□ -0.98
HMGB1P48-201ENST00000446155 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
HMGB1P48-201ENST00000446155 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
HMGB1P48-201ENST00000446155 GGCXP38435 758 aa8.92□□□□□ -0.98
HMGB1P48-201ENST00000446155 FNBP4Q8N3X1 1017 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P48-201ENST00000446155 GDPD2Q9HCC8 539 aa8.92□□□□□ -0.98
HMGB1P48-201ENST00000446155 A0A0G2JS52 829 aa8.91□□□□□ -0.98
HMGB1P48-201ENST00000446155 IRF5Q13568 498 aa8.91□□□□□ -0.98
HMGB1P48-201ENST00000446155 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
HMGB1P48-201ENST00000446155 CTHP32929 405 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms