RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
SGCE-206ENST00000445866 NKTRP30414 1462 aaKnown RBP24.27■■□□□ 1.48
SGCE-206ENST00000445866 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
SGCE-206ENST00000445866 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
SGCE-206ENST00000445866 CPS1P31327 1500 aa24.25■■□□□ 1.47
SGCE-206ENST00000445866 SBNO2Q9Y2G9 1366 aa24.25■■□□□ 1.47
SGCE-206ENST00000445866 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
SGCE-206ENST00000445866 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
SGCE-206ENST00000445866 ATF3P18847 181 aa24.23■■□□□ 1.47
SGCE-206ENST00000445866 NWD1Q149M9 1564 aa24.22■■□□□ 1.47
SGCE-206ENST00000445866 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
SGCE-206ENST00000445866 XRN1Q8IZH2 1706 aaKnown RBP24.22■■□□□ 1.47
SGCE-206ENST00000445866 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
SGCE-206ENST00000445866 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
SGCE-206ENST00000445866 DISP3Q9P2K9 1392 aa24.21■■□□□ 1.47
SGCE-206ENST00000445866 PUS7Q96PZ0 661 aaKnown RBP24.18■■□□□ 1.46
SGCE-206ENST00000445866 MSH6P52701 1360 aa24.18■■□□□ 1.46
SGCE-206ENST00000445866 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
SGCE-206ENST00000445866 ADGRL3Q9HAR2 1447 aa24.18■■□□□ 1.46
SGCE-206ENST00000445866 CADPS2Q86UW7 1296 aa24.18■■□□□ 1.46
SGCE-206ENST00000445866 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
SGCE-206ENST00000445866 WASHC2AQ641Q2 1341 aa24.17■■□□□ 1.46
SGCE-206ENST00000445866 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
SGCE-206ENST00000445866 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.46
SGCE-206ENST00000445866 ARHGEF28Q8N1W1 1705 aaKnown RBP24.14■■□□□ 1.46
SGCE-206ENST00000445866 LTBP4Q8N2S1 1624 aa24.13■■□□□ 1.45
SGCE-206ENST00000445866 CCDC61Q9Y6R9 512 aa24.13■■□□□ 1.45
SGCE-206ENST00000445866 CCDC7Q96M83 1385 aa24.13■■□□□ 1.45
SGCE-206ENST00000445866 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
SGCE-206ENST00000445866 STRCP1A6NGW2 1772 aa24.12■■□□□ 1.45
SGCE-206ENST00000445866 CABP1Q9NZU7 370 aa24.11■■□□□ 1.45
SGCE-206ENST00000445866 SLC12A5Q9H2X9 1139 aa24.11■■□□□ 1.45
SGCE-206ENST00000445866 SLAIN2Q9P270 581 aa24.11■■□□□ 1.45
SGCE-206ENST00000445866 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
SGCE-206ENST00000445866 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
SGCE-206ENST00000445866 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
SGCE-206ENST00000445866 ATAD2Q6PL18 1390 aa24.09■■□□□ 1.45
SGCE-206ENST00000445866 TULP4Q9NRJ4 1543 aa24.08■■□□□ 1.45
SGCE-206ENST00000445866 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
SGCE-206ENST00000445866 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
SGCE-206ENST00000445866 QRICH2Q9H0J4 1663 aa24.06■■□□□ 1.44
SGCE-206ENST00000445866 DCCP43146 1447 aa24.06■■□□□ 1.44
SGCE-206ENST00000445866 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
SGCE-206ENST00000445866 PLEKHG3A1L390 1219 aa24.04■■□□□ 1.44
SGCE-206ENST00000445866 TOM1O60784 492 aa24.04■■□□□ 1.44
SGCE-206ENST00000445866 PHF8Q9UPP1 1060 aa24.03■■□□□ 1.44
SGCE-206ENST00000445866 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
SGCE-206ENST00000445866 PANK3Q9H999 370 aa24.02■■□□□ 1.44
SGCE-206ENST00000445866 UBAP1LF5GYI3 381 aa24.02■■□□□ 1.44
SGCE-206ENST00000445866 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
SGCE-206ENST00000445866 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
SGCE-206ENST00000445866 C1orf167Q5SNV9 1468 aa24■■□□□ 1.43
SGCE-206ENST00000445866 ADGRB2O60241 1585 aa24■■□□□ 1.43
SGCE-206ENST00000445866 PPIP5K1Q6PFW1 1433 aa23.99■■□□□ 1.43
SGCE-206ENST00000445866 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
SGCE-206ENST00000445866 ACEP12821 1306 aa23.99■■□□□ 1.43
SGCE-206ENST00000445866 MST1RQ04912 1400 aa23.99■■□□□ 1.43
SGCE-206ENST00000445866 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
SGCE-206ENST00000445866 FOXO3O43524 673 aa23.98■■□□□ 1.43
SGCE-206ENST00000445866 ZNF692Q9BU19 519 aaPredicted RBP23.98■■□□□ 1.43
SGCE-206ENST00000445866 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
SGCE-206ENST00000445866 BRINP3Q76B58 766 aa23.97■■□□□ 1.43
SGCE-206ENST00000445866 ATP7BP35670 1465 aa23.96■■□□□ 1.43
SGCE-206ENST00000445866 PIP4K2BP78356 416 aa23.96■■□□□ 1.43
SGCE-206ENST00000445866 PSME1Q06323 249 aa23.96■■□□□ 1.43
SGCE-206ENST00000445866 NALCNQ8IZF0 1738 aa23.95■■□□□ 1.42
SGCE-206ENST00000445866 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
SGCE-206ENST00000445866 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
SGCE-206ENST00000445866 DDX17Q92841 729 aaKnown RBP23.91■■□□□ 1.42
SGCE-206ENST00000445866 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
SGCE-206ENST00000445866 KNSTRNQ9Y448 316 aa23.9■■□□□ 1.42
SGCE-206ENST00000445866 ANKRD36BQ8N2N9 1353 aa23.9■■□□□ 1.42
SGCE-206ENST00000445866 XPCQ01831 940 aaPredicted RBP23.89■■□□□ 1.42
SGCE-206ENST00000445866 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.42
SGCE-206ENST00000445866 IQSEC2Q5JU85 1478 aa23.89■■□□□ 1.42
SGCE-206ENST00000445866 POLR3AO14802 1390 aaPredicted RBP23.89■■□□□ 1.41
SGCE-206ENST00000445866 PER1O15534 1290 aaPredicted RBP23.88■■□□□ 1.41
SGCE-206ENST00000445866 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
SGCE-206ENST00000445866 NPHP3Q7Z494 1330 aa23.87■■□□□ 1.41
SGCE-206ENST00000445866 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
SGCE-206ENST00000445866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.417e-6■■□□□ 11.5
SGCE-206ENST00000445866 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
SGCE-206ENST00000445866 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
SGCE-206ENST00000445866 FMN2Q9NZ56 1722 aa23.86■■□□□ 1.41
SGCE-206ENST00000445866 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
SGCE-206ENST00000445866 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
SGCE-206ENST00000445866 TTC21BQ7Z4L5 1316 aa23.83■■□□□ 1.4
SGCE-206ENST00000445866 USP32Q8NFA0 1604 aa23.82■■□□□ 1.4
SGCE-206ENST00000445866 LMOD2Q6P5Q4 547 aa23.81■■□□□ 1.4
SGCE-206ENST00000445866 CGNL1Q0VF96 1302 aa23.81■■□□□ 1.4
SGCE-206ENST00000445866 NSD3Q9BZ95 1437 aa23.8■■□□□ 1.4
SGCE-206ENST00000445866 DIEXFQ68CQ4 756 aaKnown RBP23.79■■□□□ 1.4
SGCE-206ENST00000445866 USP6P35125 1406 aa23.79■■□□□ 1.4
SGCE-206ENST00000445866 FYB1O15117 783 aa23.79■■□□□ 1.4
SGCE-206ENST00000445866 AMER1Q5JTC6 1135 aaPredicted RBP23.78■■□□□ 1.4
SGCE-206ENST00000445866 ABTB2Q8N961 1025 aa23.78■■□□□ 1.4
SGCE-206ENST00000445866 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
SGCE-206ENST00000445866 NME9Q86XW9 330 aa23.77■■□□□ 1.4
SGCE-206ENST00000445866 EDC4Q6P2E9 1401 aaKnown RBP23.77■■□□□ 1.4
SGCE-206ENST00000445866 SOS2Q07890 1332 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 351.3 ms